Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 0.0e+00 1238.4 660 100.0
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 4.5e-129 466.1 754 47.1
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 1.0e-125 454.9 698 47.1
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 1.7e-123 447.6 748 45.6
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 4.9e-123 446.0 721 46.7
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 3.5e-121 439.9 694 46.8
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 3.3e-119 433.3 721 44.0
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 2.7e-113 413.7 702 43.3
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 1.3e-112 411.4 666 45.0
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 1.2e-110 404.8 750 41.7
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 1.2e-110 404.8 759 44.3
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.2e-108 398.3 663 43.9
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 2.0e-108 397.5 751 42.1
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 2.6e-108 397.1 749 42.3
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 7.5e-108 395.6 710 43.8
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 1.7e-107 394.4 765 41.3
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 4.9e-107 392.9 749 43.5
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 2.4e-106 390.6 717 43.2
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 3.2e-106 390.2 656 43.8
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 3.2e-106 390.2 701 41.5
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 3.2e-106 390.2 711 43.6
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 4.1e-106 389.8 656 43.8
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 4.1e-106 389.8 656 43.8
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 4.1e-106 389.8 722 43.1
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 5.4e-106 389.4 722 42.8
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.7e-105 387.1 661 43.6
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 4.6e-105 386.3 662 44.0
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 1.1e-103 381.7 761 44.0
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 7.3e-103 379.0 722 43.5
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 4.7e-102 376.3 725 39.4
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 4.7e-102 376.3 747 39.4
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 4.0e-101 373.2 748 41.6
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.6e-100 370.5 701 41.1
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 2.6e-100 370.5 580 45.0
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 3.4e-100 370.2 665 42.6
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 5.8e-100 369.4 706 43.9
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 6.4e-99 365.9 737 41.9
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 1.7e-96 357.8 711 42.1
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 3.9e-96 356.7 689 44.0
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 1.6e-94 351.3 709 38.8
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 2.4e-93 347.4 607 43.5
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 1.5e-92 344.7 709 41.7
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 1.7e-91 341.3 706 40.7
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 2.2e-91 340.9 665 41.8
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 3.8e-91 340.1 694 41.2
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 8.4e-91 339.0 684 41.4
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 1.4e-90 338.2 705 41.4
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 1.9e-90 337.8 595 44.2
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 3.2e-90 337.0 707 40.3
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 2.7e-89 334.0 687 41.3
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 9.6e-87 325.5 724 39.2
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 2.1e-86 324.3 701 38.7
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 1.4e-85 321.6 725 40.0
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 1.4e-85 321.6 733 39.4
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 6.7e-80 302.8 627 40.5
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 1.9e-79 301.2 498 48.4
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 4.8e-78 296.6 808 35.0
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 4.0e-77 293.5 673 38.2
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 5.3e-77 293.1 770 34.0
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 6.9e-77 292.7 702 37.2
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 6.9e-77 292.7 761 36.0
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 4.5e-76 290.0 676 38.2
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 2.2e-75 287.7 669 38.3
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 2.9e-75 287.3 684 36.1
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 1.9e-74 284.6 754 35.8
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 4.2e-74 283.5 673 37.4
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 7.1e-74 282.7 725 36.0
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 3.5e-73 280.4 690 37.7
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 4.3e-71 273.5 686 36.6
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 3.7e-70 270.4 672 38.1
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 6.2e-70 269.6 618 39.0
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 8.2e-70 269.2 716 38.4
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 1.4e-69 268.5 693 36.9
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 4.0e-69 266.9 730 37.5
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 5.8e-68 263.1 675 37.6
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 2.2e-67 261.2 693 36.1
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 6.5e-67 259.6 705 35.7
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 1.1e-66 258.8 658 36.2
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 9.3e-66 255.8 658 37.7
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 7.9e-65 252.7 701 38.8
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 1.8e-64 251.5 704 38.6
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 3.0e-64 250.8 735 35.1
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 5.1e-64 250.0 666 35.6
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 1.9e-63 248.1 671 36.1
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 4.3e-63 246.9 669 37.1
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 5.7e-63 246.5 699 35.3
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 7.4e-63 246.1 456 45.0
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 9.7e-63 245.7 642 34.1
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 1.6e-62 245.0 669 37.8
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 2.2e-62 244.6 672 35.4
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 2.2e-62 244.6 661 36.6
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 2.2e-62 244.6 700 34.9
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 8.2e-62 242.7 664 37.3
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 2.6e-60 237.7 712 34.3
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 7.7e-60 236.1 711 34.6
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 1.7e-59 235.0 733 34.7
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 1.1e-58 232.3 676 34.6
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 1.9e-58 231.5 687 33.6
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 1.9e-58 231.5 671 35.3
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 3.6e-57 227.3 721 37.4
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 1.8e-56 224.9 651 35.2
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 3.0e-56 224.2 658 36.8
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 6.7e-56 223.0 682 34.9
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 2.5e-55 221.1 650 33.4
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 1.3e-54 218.8 583 37.7
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 6.3e-54 216.5 645 35.3
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 1.8e-53 214.9 678 33.5
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 1.2e-52 212.2 539 36.5
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 1.1e-50 205.7 658 33.3
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 3.2e-50 204.1 704 32.4
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 4.2e-50 203.8 648 31.8
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 7.2e-50 203.0 732 33.3
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 3.6e-49 200.7 716 32.5
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 2.3e-48 198.0 645 32.4
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 3.0e-48 197.6 586 35.3
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 8.8e-48 196.1 296 45.6
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 5.7e-47 193.4 671 32.0
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 7.4e-47 193.0 622 33.9
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 1.7e-46 191.8 714 30.1
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 3.1e-45 187.6 644 30.9
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 5.3e-45 186.8 626 30.8
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 5.9e-44 183.3 652 30.7
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 2.2e-43 181.4 652 31.9
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 3.6e-41 174.1 702 29.1
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 8.0e-41 172.9 268 47.4
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 6.3e-38 163.3 616 30.5
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 2.4e-37 161.4 630 30.0
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 2.6e-36 157.9 613 32.0
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 3.6e-33 147.5 192 53.1
unitig_37.g11944 Utricularia gibba HOM05D003765 ORTHO05D004561 6.7e-32 143.3 660 29.7
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 8.3e-30 136.3 642 29.3
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 1.8e-29 135.2 532 30.1
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 1.7e-27 128.6 774 26.7
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 3.2e-26 124.4 737 28.1
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 1.6e-25 122.1 435 31.0
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 2.7e-25 121.3 435 31.0
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 2.7e-25 121.3 435 29.4
unitig_22.g5225 Utricularia gibba HOM05D003765 ORTHO05D004561 4.7e-25 120.6 554 28.7
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 8.8e-24 116.3 449 32.1
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 3.4e-23 114.4 437 31.4
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 8.3e-22 109.8 634 28.9
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 8.3e-22 109.8 387 32.0
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.4e-21 109.0 332 29.8
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 2.4e-21 108.2 437 28.8
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 1.6e-20 105.5 280 37.5
A08p21190 Brassica napus HOM05D003765 ORTHO05D004561 3.8e-19 100.9 353 28.9
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 5.0e-19 100.5 628 26.6
BraA08t34069Z Brassica rapa HOM05D003765 ORTHO05D004561 1.5e-18 99.0 352 28.4
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 5.5e-18 97.1 157 44.6
Sed0026899 Sechium edule HOM05D003765 ORTHO05D004561 5.5e-18 97.1 586 27.1
BolC8t48608H Brassica oleracea HOM05D003765 ORTHO05D004561 7.2e-18 96.7 397 28.2
BcaC07g38188 Brassica carinata HOM05D003765 ORTHO05D004561 1.6e-17 95.5 396 28.0
BcaB03g12466 Brassica carinata HOM05D003765 ORTHO05D004561 1.8e-16 92.0 443 26.4
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 8.9e-16 89.7 478 27.6
VMungo0251G2630 Vigna mungo HOM05D003765 ORTHO05D004561 2.6e-15 88.2 110 50.0
VMungo0100G0003 Vigna mungo HOM05D003765 ORTHO05D004561 5.7e-15 87.0 112 50.9
BolC9t53753H Brassica oleracea HOM05D003765 ORTHO05D004561 9.8e-15 86.3 388 30.4
BraA09t36408Z Brassica rapa HOM05D003765 ORTHO05D004561 1.7e-14 85.5 382 29.3
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea HOM05D003765 ORTHO05D004561 2.8e-14 84.7 744 25.3
C09p08430 Brassica napus HOM05D003765 ORTHO05D004561 2.8e-14 84.7 405 29.4
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 4.9e-14 84.0 209 31.1
VMungo0464G2043 Vigna mungo HOM05D003765 ORTHO05D004561 3.1e-13 81.3 233 32.2
A09p07540 Brassica napus HOM05D003765 ORTHO05D004561 5.4e-13 80.5 421 27.1
Os04g0106500 Oryza sativa ssp. japonica HOM05D003765 ORTHO05D004561 3.5e-12 77.8 579 24.7
AL7G27690 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 1.0e-11 76.3 434 26.7
BcaC04g23427 Brassica carinata HOM05D003765 ORTHO05D004561 1.0e-11 76.3 382 29.8
BcaNung01408 Brassica carinata HOM05D003765 ORTHO05D004561 2.3e-11 75.1 386 28.0
BcaNung01409 Brassica carinata HOM05D003765 ORTHO05D004561 2.3e-11 75.1 386 28.0
Carub.0007s1558 Capsella rubella HOM05D003765 ORTHO05D004561 8.6e-11 73.2 393 30.0
Lalb_Chr19g0131131 Lupinus albus HOM05D003765 ORTHO05D004561 1.1e-10 72.8 493 27.0
SEGI_17592 Sequoiadendron giganteum HOM05D003765 ORTHO05D004561 7.3e-10 70.1 183 27.9
CsaV3_5G005590 Cucumis sativus L. HOM05D003765 ORTHO05D004561 9.5e-10 69.7 377 28.6
HPP92_022139 Vanilla planifolia HOM05D003765 ORTHO05D004561 6.1e-09 67.0 645 24.5
HPP92_022144 Vanilla planifolia HOM05D003765 ORTHO05D004561 1.4e-08 65.9 652 24.7
Zm00001eb418620 Zea mays HOM05D003765 ORTHO05D004561 2.3e-08 65.1 523 24.7
Duzib205G0479 Durio zibethinus HOM05D003765 ORTHO05D004561 8.3e-06 56.6 64 51.6


User provided reference genes

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