Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 9.1e-78 293.5 148 100.0
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 8.5e-60 233.8 143 78.3
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 3.6e-58 228.4 143 76.2
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.0e-57 225.3 144 73.6
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 1.2e-56 223.4 137 78.1
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 1.5e-56 223.0 143 74.1
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.6e-56 222.2 144 72.9
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.3e-56 221.9 144 72.2
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 4.4e-56 221.5 141 72.3
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 5.7e-56 221.1 145 72.4
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 9.7e-56 220.3 145 73.1
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 9.7e-56 220.3 141 74.5
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 1.7e-55 219.5 140 76.4
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 2.2e-55 219.2 142 71.8
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.8e-55 218.8 140 72.1
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 2.8e-55 218.8 142 69.7
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 3.7e-55 218.4 143 72.7
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 6.3e-55 217.6 140 71.4
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 6.3e-55 217.6 140 72.1
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 6.3e-55 217.6 143 68.5
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 1.1e-54 216.9 140 75.0
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.1e-54 216.9 140 71.4
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 1.1e-54 216.9 144 70.8
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 1.4e-54 216.5 142 68.3
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 1.4e-54 216.5 143 69.9
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 1.4e-54 216.5 143 71.3
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 1.8e-54 216.1 140 72.1
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 2.4e-54 215.7 142 70.4
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 2.4e-54 215.7 141 72.3
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 2.4e-54 215.7 144 69.4
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 2.4e-54 215.7 144 70.1
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 3.1e-54 215.3 142 72.5
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 3.1e-54 215.3 140 71.4
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 3.1e-54 215.3 141 71.6
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 5.3e-54 214.5 140 72.1
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 5.3e-54 214.5 144 70.1
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 5.3e-54 214.5 140 70.7
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 5.3e-54 214.5 144 72.9
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 5.3e-54 214.5 142 69.0
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 9.1e-54 213.8 144 73.6
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 1.2e-53 213.4 140 70.7
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 1.2e-53 213.4 145 69.0
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 1.6e-53 213.0 139 74.1
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 2.0e-53 212.6 141 71.6
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 2.0e-53 212.6 161 65.2
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 2.0e-53 212.6 141 72.3
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 2.0e-53 212.6 144 69.4
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 2.7e-53 212.2 141 70.9
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 3.5e-53 211.8 140 70.0
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 4.5e-53 211.5 142 67.6
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 4.5e-53 211.5 138 71.0
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 5.9e-53 211.1 144 68.8
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 5.9e-53 211.1 139 73.4
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 7.7e-53 210.7 139 71.9
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 1.0e-52 210.3 139 71.2
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.3e-52 209.9 139 69.1
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 1.3e-52 209.9 141 68.8
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 2.2e-52 209.1 140 69.3
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 5.0e-52 208.0 138 69.6
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 5.0e-52 208.0 144 68.1
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 5.0e-52 208.0 144 68.1
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 8.5e-52 207.2 136 71.3
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 8.5e-52 207.2 141 68.1
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 8.5e-52 207.2 144 67.4
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.1e-51 206.8 139 70.5
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 1.1e-51 206.8 144 67.4
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 1.5e-51 206.5 142 65.5
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 1.9e-51 206.1 144 66.7
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 3.2e-51 205.3 142 69.0
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 5.5e-51 204.5 140 70.7
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 9.4e-51 203.8 146 69.9
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 1.6e-50 203.0 141 71.6
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 4.7e-50 201.4 141 67.4
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 4.0e-49 198.4 143 66.4
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 5.7e-48 194.5 138 65.9
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 1.3e-47 193.4 140 62.9
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 6.3e-47 191.0 144 66.7
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 4.1e-46 188.3 140 63.6
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 9.1e-46 187.2 143 62.9
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 1.6e-45 186.4 144 62.5
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 3.5e-45 185.3 144 61.8
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 3.5e-45 185.3 144 61.8
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 3.5e-45 185.3 144 61.8
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 1.3e-44 183.3 142 64.1
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 1.7e-44 183.0 142 59.2
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 3.8e-44 181.8 145 63.4
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 1.1e-43 180.3 142 62.7
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 1.5e-43 179.9 142 62.7
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 1.5e-43 179.9 139 62.6
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 1.9e-43 179.5 139 63.3
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 3.3e-43 178.7 135 63.0
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 5.5e-43 177.9 138 63.8
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 9.5e-43 177.2 115 73.0
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 2.6e-40 169.1 134 62.7
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 2.8e-39 165.6 138 55.1
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 3.7e-39 165.2 141 55.3
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 1.0e-36 157.1 135 51.9
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 5.0e-36 154.8 137 50.4
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 6.8e-33 144.4 138 46.4
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.7e-31 139.8 139 45.3
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 4.9e-31 138.3 143 45.5
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 2.4e-30 136.0 136 45.6
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 7.0e-30 134.4 143 52.4
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 9.2e-30 134.0 87 70.1
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 2.7e-29 132.5 141 50.4
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.3e-28 130.2 91 68.1
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 3.0e-28 129.0 152 43.4
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 3.0e-28 129.0 138 42.8
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.2e-24 117.1 122 54.1
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 7.8e-21 104.4 83 60.2
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 8.9e-17 90.9 66 65.2
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 2.6e-16 89.4 139 35.3
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 5.1e-12 75.1 51 60.8
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 8.9e-09 64.3 96 35.4
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 3.8e-07 58.9 48 52.1


User provided reference genes

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