Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 2.6e-81 305.4 166 100.0
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 2.2e-11 73.2 127 39.4
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.2e-09 67.4 118 45.8
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.6e-09 66.2 126 46.0
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 4.5e-09 65.5 123 43.9
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 5.9e-09 65.1 68 54.4
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.9e-09 65.1 126 43.7
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 5.9e-09 65.1 126 45.2
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 1.3e-08 63.9 39 82.1
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.7e-08 63.5 38 81.6
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 1.7e-08 63.5 39 82.1
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.7e-08 63.5 39 82.1
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.7e-08 63.5 39 82.1
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 2.2e-08 63.2 51 62.7
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 2.2e-08 63.2 39 79.5
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 2.9e-08 62.8 40 75.0
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 2.9e-08 62.8 39 82.1
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 3.8e-08 62.4 71 54.9
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 3.8e-08 62.4 112 42.9
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 5.0e-08 62.0 125 38.4
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 5.0e-08 62.0 105 41.9
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 5.0e-08 62.0 45 71.1
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 5.0e-08 62.0 92 47.8
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 6.5e-08 61.6 39 76.9
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 6.5e-08 61.6 39 79.5
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.5e-08 61.2 82 46.3
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.1e-07 60.8 39 71.8
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.1e-07 60.8 39 79.5
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.9e-07 60.1 130 36.9
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.9e-07 60.1 128 37.5
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 1.9e-07 60.1 39 76.9
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.9e-07 60.1 80 46.2
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 1.9e-07 60.1 131 39.7
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.5e-07 59.7 80 46.2
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 2.5e-07 59.7 110 43.6
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.2e-07 59.3 72 48.6
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 3.2e-07 59.3 36 77.8
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 4.2e-07 58.9 63 54.0
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 5.5e-07 58.5 99 45.5
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 9.4e-07 57.8 97 41.2
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 9.4e-07 57.8 87 40.2
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.2e-06 57.4 35 82.9
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 1.2e-06 57.4 35 82.9
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 1.2e-06 57.4 35 82.9
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.2e-06 57.4 35 82.9
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 1.2e-06 57.4 73 49.3
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 1.6e-06 57.0 60 55.0
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.1e-06 56.6 115 39.1
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.1e-06 56.6 85 42.4
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 2.1e-06 56.6 94 44.7
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 2.7e-06 56.2 35 80.0
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.7e-06 56.2 116 37.1
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.7e-06 56.2 116 37.1
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 3.6e-06 55.8 124 41.9
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 4.7e-06 55.5 85 44.7
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 4.7e-06 55.5 85 42.4
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 4.7e-06 55.5 105 41.0
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 6.1e-06 55.1 79 48.1
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 6.1e-06 55.1 108 40.7
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 7.9e-06 54.7 82 47.6
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 7.9e-06 54.7 79 50.6
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 7.9e-06 54.7 53 56.6
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 7.9e-06 54.7 131 38.2


User provided reference genes

Program Settings