Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030057.1 Olea europaea HOM05D007824 ORTHO05D009875 1.0e-20 102.4 52 100.0
Nitab4.5_0007473g0010 Nicotiana tabacum HOM05D007824 ORTHO05D009875 1.0e-15 85.9 52 80.8
CSS0038513 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 5.0e-15 83.6 52 78.8
Migut.E01438 Erythranthe guttata HOM05D007824 ORTHO05D009875 8.5e-15 82.8 52 78.8
Migut.A00397 Erythranthe guttata HOM05D007824 ORTHO05D009875 1.9e-14 81.6 52 76.9
PGSC0003DMG402026306 Solanum tuberosum HOM05D007824 ORTHO05D009875 4.2e-14 80.5 52 75.0
Solyc08g006580.3 Solanum lycopersicum HOM05D007824 ORTHO05D009875 5.5e-14 80.1 52 75.0
ClCG05G016050 Citrullus lanatus HOM05D007824 ORTHO05D009875 2.7e-13 77.8 52 69.2
Prupe.1G398400 Prunus persica HOM05D007824 ORTHO05D009875 3.6e-13 77.4 54 75.9
MELO3C016940.2 Cucumis melo HOM05D007824 ORTHO05D009875 2.3e-12 74.7 52 65.4
MD08G1050300 Malus domestica HOM05D007824 ORTHO05D009875 2.3e-12 74.7 54 72.2
CSS0035617 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.0e-12 74.3 52 75.0
CiPaw.08G004000 Carya illinoinensis HOM05D007824 ORTHO05D009875 3.0e-12 74.3 46 76.1
Nn5g27701 Nelumbo nucifera HOM05D007824 ORTHO05D009875 4.0e-12 73.9 52 69.2
CSS0021115 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 5.2e-12 73.6 52 73.1
Ciclev10010135m.g Citrus clementina HOM05D007824 ORTHO05D009875 5.2e-12 73.6 49 69.4
ClCG08G013840 Citrullus lanatus HOM05D007824 ORTHO05D009875 6.8e-12 73.2 52 65.4
CSS0041715 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 1.2e-11 72.4 51 74.5
Sed0001567 Sechium edule HOM05D007824 ORTHO05D009875 1.2e-11 72.4 52 65.4
Sed0025799 Sechium edule HOM05D007824 ORTHO05D009875 1.2e-11 72.4 52 65.4
Eucgr.C04026 Eucalyptus grandis HOM05D007824 ORTHO05D009875 1.5e-11 72.0 49 67.3
Sc23g0006310 Simmondsia chinensis HOM05D007824 ORTHO05D009875 2.0e-11 71.6 51 72.5
unitig_46.g18221 Utricularia gibba HOM05D007824 ORTHO05D009875 2.0e-11 71.6 52 59.6
CSS0008945 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 2.6e-11 71.2 52 71.2
RcHm_v2.0_Chr6g0299081 Rosa chinensis HOM05D007824 ORTHO05D009875 2.6e-11 71.2 54 68.5
CSS0044029 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.4e-11 70.9 52 71.2
Sed0025864 Sechium edule HOM05D007824 ORTHO05D009875 4.4e-11 70.5 52 61.5
Oeu006856.1 Olea europaea HOM05D007824 ORTHO05D009875 5.7e-11 70.1 49 71.4
Manes.03G006300 Manihot esculenta HOM05D007824 ORTHO05D009875 7.5e-11 69.7 43 74.4
Thecc.09G011700 Theobroma cacao HOM05D007824 ORTHO05D009875 7.5e-11 69.7 52 67.3
Potri.018G014101 Populus trichocarpa HOM05D007824 ORTHO05D009875 2.2e-10 68.2 43 74.4
Sed0013399 Sechium edule HOM05D007824 ORTHO05D009875 2.2e-10 68.2 52 57.7
CiPaw.07G233700 Carya illinoinensis HOM05D007824 ORTHO05D009875 2.8e-10 67.8 42 78.6
MD15G1044500 Malus domestica HOM05D007824 ORTHO05D009875 2.8e-10 67.8 54 68.5
THA.LOC104803330 Tarenaya hassleriana HOM05D007824 ORTHO05D009875 3.7e-10 67.4 49 57.1
Atru.chr7.2598 Acer truncatum HOM05D007824 ORTHO05D009875 4.8e-10 67.0 56 64.3
Gohir.A13G178900 Gossypium hirsutum HOM05D007824 ORTHO05D009875 4.8e-10 67.0 43 69.8
Gohir.D13G187000 Gossypium hirsutum HOM05D007824 ORTHO05D009875 4.8e-10 67.0 43 69.8
Duzib168G1878 Durio zibethinus HOM05D007824 ORTHO05D009875 8.3e-10 66.2 43 67.4
Gohir.A05G062100 Gossypium hirsutum HOM05D007824 ORTHO05D009875 8.3e-10 66.2 42 69.0
Glyma.04G059451 Glycine max HOM05D007824 ORTHO05D009875 1.1e-09 65.9 53 62.3
Gohir.D05G064600 Gossypium hirsutum HOM05D007824 ORTHO05D009875 1.1e-09 65.9 43 67.4
Lalb_Chr08g0244541 Lupinus albus HOM05D007824 ORTHO05D009875 1.4e-09 65.5 53 64.2
Gorai.009G065300 Gossypium raimondii HOM05D007824 ORTHO05D009875 1.8e-09 65.1 42 69.0
Aa31LG3G16350 Aethionema arabicum HOM05D007824 ORTHO05D009875 2.7e-08 61.2 43 65.1
Phvul.009G085600 Phaseolus vulgaris HOM05D007824 ORTHO05D009875 2.7e-08 61.2 49 59.2
Medtr3g105765 Medicago truncatula HOM05D007824 ORTHO05D009875 4.5e-08 60.5 53 58.5
Glyma.06G059900 Glycine max HOM05D007824 ORTHO05D009875 7.7e-08 59.7 53 56.6
Zm00001eb221680 Zea mays HOM05D007824 ORTHO05D009875 1.0e-07 59.3 45 64.4
CARHR202570 Cardamine hirsuta HOM05D007824 ORTHO05D009875 2.9e-07 57.8 43 60.5
Thhalv10015471m.g Eutrema salsugineum HOM05D007824 ORTHO05D009875 2.9e-07 57.8 43 60.5
CSS0018794 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.8e-07 57.4 36 80.6
Mapoly0056s0140 Marchantia polymorpha HOM05D007824 ORTHO05D009875 1.1e-06 55.8 48 58.3
Glyma.17G221200 Glycine max HOM05D007824 ORTHO05D009875 1.5e-06 55.5 47 53.2
Os10g0478900 Oryza sativa ssp. japonica HOM05D007824 ORTHO05D009875 1.5e-06 55.5 44 59.1
arahy.Tifrunner.gnm1.ann1.58R7DF Arachis hypogaea HOM05D007824 ORTHO05D009875 2.5e-06 54.7 35 74.3
arahy.Tifrunner.gnm1.ann1.A82CWH Arachis hypogaea HOM05D007824 ORTHO05D009875 2.5e-06 54.7 35 74.3
Lj5g0022212 Lotus japonicus HOM05D007824 ORTHO05D009875 2.5e-06 54.7 61 50.8
Medtr1g013350 Medicago truncatula HOM05D007824 ORTHO05D009875 4.2e-06 53.9 48 56.2
Solyc08g068930.3 Solanum lycopersicum HOM05D007824 ORTHO05D009875 9.5e-06 52.8 36 75.0


User provided reference genes

Program Settings