Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 2.2e-88 328.9 169 100.0
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 2.3e-77 292.4 187 83.4
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 5.2e-53 211.5 194 65.5
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 8.5e-48 194.1 211 56.9
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 1.3e-27 127.1 78 92.3
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 9.2e-26 120.9 194 43.8
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 1.6e-25 120.2 197 42.1
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 3.5e-25 119.0 204 43.1
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 7.8e-25 117.9 197 40.6
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.9e-23 113.2 221 37.6
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 7.3e-23 111.3 193 38.9
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 1.2e-22 110.5 192 42.7
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 2.1e-22 109.8 185 43.8
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 4.7e-22 108.6 204 36.8
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 4.7e-22 108.6 200 37.5
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 6.2e-22 108.2 190 39.5
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 8.0e-22 107.8 189 43.9
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.4e-21 107.1 205 40.5
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 2.3e-21 106.3 205 38.0
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 4.0e-21 105.5 182 42.9
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.2e-21 105.1 232 34.5
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 6.8e-21 104.8 197 38.1
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 6.8e-21 104.8 200 38.5
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 6.8e-21 104.8 187 42.2
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.2e-20 104.0 204 35.8
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.2e-20 104.0 233 35.6
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.5e-20 103.6 201 38.3
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 1.5e-20 103.6 223 35.0
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 4.4e-20 102.1 204 37.7
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 5.8e-20 101.7 195 37.4
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 7.5e-20 101.3 210 33.3
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 4.9e-19 98.6 217 35.0
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.9e-19 98.6 224 34.4
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 4.9e-19 98.6 238 33.2
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 2.4e-18 96.3 204 35.3
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 2.4e-18 96.3 208 36.1
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 4.1e-18 95.5 226 35.0
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 5.4e-18 95.1 198 38.9
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 5.4e-18 95.1 204 37.3
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 7.0e-18 94.7 211 33.6
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 9.2e-18 94.4 211 33.6
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 9.2e-18 94.4 241 29.9
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 1.2e-17 94.0 187 39.0
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.6e-17 93.6 151 39.7
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 2.1e-17 93.2 165 41.8
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.7e-17 92.8 225 33.3
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 2.7e-17 92.8 200 34.0
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 2.7e-17 92.8 199 38.2
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.6e-17 92.0 224 33.0
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 6.0e-17 91.7 224 33.0
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 6.0e-17 91.7 224 33.0
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 7.8e-17 91.3 209 34.9
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.0e-16 90.9 208 34.1
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.7e-16 90.1 215 34.4
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 2.3e-16 89.7 208 31.7
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 3.0e-16 89.4 194 36.6
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 3.9e-16 89.0 222 33.8
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 3.9e-16 89.0 224 33.0
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 5.1e-16 88.6 187 38.5
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 6.6e-16 88.2 172 36.6
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 8.6e-16 87.8 220 34.1
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.9e-15 86.7 196 37.2
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 3.3e-15 85.9 221 33.5
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 3.3e-15 85.9 221 33.5
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 4.3e-15 85.5 202 36.1
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 4.3e-15 85.5 196 36.2
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 4.3e-15 85.5 204 34.3
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 5.6e-15 85.1 177 37.3
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 7.3e-15 84.7 254 28.7
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 2.1e-14 83.2 47 87.2
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 6.2e-14 81.6 208 31.2
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 8.1e-14 81.3 186 34.4
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 1.1e-13 80.9 115 39.1
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.1e-13 80.9 205 34.6
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 1.4e-13 80.5 167 37.7
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 1.8e-13 80.1 181 34.3
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 5.2e-13 78.6 164 37.8
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 1.2e-12 77.4 198 31.3
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 3.4e-12 75.9 162 36.4
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 7.5e-12 74.7 232 29.7
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 7.5e-12 74.7 201 34.8
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 7.5e-12 74.7 181 32.0
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 9.9e-12 74.3 185 35.7
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 2.2e-11 73.2 189 34.9
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 2.2e-11 73.2 179 32.4
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 3.7e-11 72.4 194 32.5
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 6.4e-11 71.6 187 33.7
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 8.3e-11 71.2 228 32.0
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.1e-10 70.9 187 33.7
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.1e-10 70.9 186 32.8
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 1.4e-10 70.5 205 31.7
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.2e-10 69.3 157 38.2
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 3.2e-10 69.3 157 38.2
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 5.4e-10 68.6 83 41.0
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 1.2e-09 67.4 190 32.1
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 4.6e-09 65.5 188 27.1
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 6.0e-09 65.1 181 29.8
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.3e-08 63.9 168 32.1
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.7e-08 63.5 174 37.9
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 6.6e-08 61.6 170 32.9
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 8.6e-08 61.2 83 38.6
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.1e-07 60.8 200 32.0
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.5e-07 60.5 193 35.2
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 1.9e-07 60.1 190 32.6
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.3e-07 59.3 85 41.2
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 4.3e-07 58.9 84 52.4
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 4.3e-07 58.9 234 27.4
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 4.3e-07 58.9 85 35.3
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 9.5e-07 57.8 89 34.8
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 2.1e-06 56.6 78 37.2
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 2.1e-06 56.6 111 30.6
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 2.8e-06 56.2 154 30.5


User provided reference genes

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