Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029947.1 Olea europaea HOM05D000258 ORTHO05D289014 5.3e-19 96.7 48 100.0
Potri.016G065300 Populus trichocarpa HOM05D000258 ORTHO05D000153 2.7e-07 57.8 47 66.0
Migut.K00888 Erythranthe guttata HOM05D000258 ORTHO05D000153 3.5e-07 57.4 49 59.2
Sabra09G0046800 Salix brachista HOM05D000258 ORTHO05D000153 3.5e-07 57.4 46 63.0
Oeu040056.1 Olea europaea HOM05D000258 ORTHO05D000153 6.0e-07 56.6 54 55.6
Atru.chr3.1204 Acer truncatum HOM05D000258 ORTHO05D000153 7.9e-07 56.2 46 63.0
Lju188A10T79 Lonicera japonica HOM05D000258 ORTHO05D000153 1.0e-06 55.8 46 60.9
BcaB03g12320 Brassica carinata HOM05D000258 ORTHO05D000153 1.3e-06 55.5 46 60.9
CiPaw.08G143800 Carya illinoinensis HOM05D000258 ORTHO05D000153 1.3e-06 55.5 45 66.7
Eucgr.I00570 Eucalyptus grandis HOM05D000258 ORTHO05D000153 1.3e-06 55.5 46 60.9
Lj4A266G28 Lonicera japonica HOM05D000258 ORTHO05D000153 1.3e-06 55.5 46 60.9
Lju188C12T6 Lonicera japonica HOM05D000258 ORTHO05D000153 1.3e-06 55.5 46 60.9
Manes.13G102500 Manihot esculenta HOM05D000258 ORTHO05D000153 1.3e-06 55.5 47 63.8
Cfa006854 Carpinus fangiana HOM05D000258 ORTHO05D000153 1.8e-06 55.1 46 63.0
AUR62003695 Chenopodium quinoa HOM05D000258 ORTHO05D000153 1.8e-06 55.1 46 63.0
Haze_20594 Corylus avellana HOM05D000258 ORTHO05D000153 1.8e-06 55.1 50 52.0
FAN28G0847 Fragaria x ananassa HOM05D000258 ORTHO05D000153 1.8e-06 55.1 48 58.3
Psat2g091880 Pisum sativum HOM05D000258 ORTHO05D000153 1.8e-06 55.1 46 60.9
Potri.006G199100 Populus trichocarpa HOM05D000258 ORTHO05D000153 1.8e-06 55.1 46 63.0
Prupe.6G207600 Prunus persica HOM05D000258 ORTHO05D000153 1.8e-06 55.1 46 60.9
Prupe.6G208100 Prunus persica HOM05D000258 ORTHO05D000153 1.8e-06 55.1 47 59.6
PGR102G0027 Punica granatum HOM05D000258 ORTHO05D000153 1.8e-06 55.1 53 50.9
SalBow5G2372 Salvia bowleyana HOM05D000258 ORTHO05D000153 1.8e-06 55.1 46 58.7
Hund16517 Selenicereus undatus HOM05D000258 ORTHO05D000153 1.8e-06 55.1 47 57.4
TAR628G1138 Trochodendron aralioides HOM05D000258 ORTHO05D000153 1.8e-06 55.1 46 60.9
CiPaw.07G044100 Carya illinoinensis HOM05D000258 ORTHO05D000153 2.3e-06 54.7 46 60.9
Thhalv10025561m.g Eutrema salsugineum HOM05D000258 ORTHO05D000153 2.3e-06 54.7 50 56.0
Gohir.A12G084825 Gossypium hirsutum HOM05D000258 ORTHO05D000153 2.3e-06 54.7 46 63.0
Gorai.008G089500 Gossypium raimondii HOM05D000258 ORTHO05D000153 2.3e-06 54.7 46 63.0
Manes.12G124000 Manihot esculenta HOM05D000258 ORTHO05D000153 2.3e-06 54.7 46 60.9
QL06p036440 Quercus lobata HOM05D000258 ORTHO05D000153 2.3e-06 54.7 50 54.0
unitig_82.g27112 Utricularia gibba HOM05D000258 ORTHO05D000153 2.3e-06 54.7 49 57.1
Aqoxy2G03240 Aquilegia oxysepala HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 58.7
BcaC01g00362 Brassica carinata HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 58.7
C03p78820 Brassica napus HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 58.7
C03p78870 Brassica napus HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 58.7
BolC3t20129H Brassica oleracea HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 58.7
BolC3t20131H Brassica oleracea HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 58.7
CSS0014922 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 60.9
CSS0036955 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 60.9
Carub.0007s0224 Capsella rubella HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 60.9
Haze_03909 Corylus avellana HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 60.9
Glyma.01G021000 Glycine max HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 60.9
Manes.02G206400 Manihot esculenta HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 60.9
Medtr8g068190 Medicago truncatula HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 60.9
Nitab4.5_0000402g0170 Nicotiana tabacum HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 60.9
Prupe.6G205700 Prunus persica HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 58.7
Prupe.6G205900 Prunus persica HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 58.7
Prupe.6G207100 Prunus persica HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 58.7
Prupe.6G207700 Prunus persica HOM05D000258 ORTHO05D000153 3.0e-06 54.3 47 61.7
PGR102G0705 Punica granatum HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 60.9
QL06p036444 Quercus lobata HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 60.9
Sabra16G0164500 Salix brachista HOM05D000258 ORTHO05D000153 3.0e-06 54.3 46 63.0
Sabra16G0164600 Salix brachista HOM05D000258 ORTHO05D000153 3.0e-06 54.3 48 62.5
unitig_62.g23415 Utricularia gibba HOM05D000258 ORTHO05D000153 3.0e-06 54.3 48 58.3
Aqoxy6G00665 Aquilegia oxysepala HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 58.7
arahy.Tifrunner.gnm1.ann1.WDK2BM Arachis hypogaea HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 58.7
Cfa006853 Carpinus fangiana HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 60.9
Ciclev10025933m.g Citrus clementina HOM05D000258 ORTHO05D000153 3.9e-06 53.9 47 57.4
Lj6P824T53 Lonicera japonica HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 58.7
MD10G1155000 Malus domestica HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 60.9
MD10G1155400 Malus domestica HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 60.9
MD10G1155700 Malus domestica HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 60.9
MD15G1308800 Malus domestica HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 60.9
Medtr5g031390 Medicago truncatula HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 60.9
Nitab4.5_0000402g0180 Nicotiana tabacum HOM05D000258 ORTHO05D000153 3.9e-06 53.9 48 58.3
Phvul.002G144800 Phaseolus vulgaris HOM05D000258 ORTHO05D000153 3.9e-06 53.9 47 59.6
Potri.009G063300 Populus trichocarpa HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 58.7
PGR102G2912 Punica granatum HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 58.7
SalBow7G3332 Salvia bowleyana HOM05D000258 ORTHO05D000153 3.9e-06 53.9 48 60.4
TPR.G28820 Trifolium pratense HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 60.9
TWI77G0497 Tripterygium wilfordii HOM05D000258 ORTHO05D000153 3.9e-06 53.9 46 60.9
Ah.03g143230 Amaranthus hybridus HOM05D000258 ORTHO05D000153 5.1e-06 53.5 48 54.2
Aqoxy2G03241 Aquilegia oxysepala HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 60.9
AT4G37980 Arabidopsis thaliana HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 60.9
MSTRG.3822 Avicennia marina HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
A01p01090 Brassica napus HOM05D000258 ORTHO05D000153 5.1e-06 53.5 50 54.0
BraA01t00107Z Brassica rapa HOM05D000258 ORTHO05D000153 5.1e-06 53.5 50 54.0
CSS0000348 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
CSS0011616 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 56.5
CSS0015947 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
CSS0018190 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
CSS0024039 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 56.5
CSS0039486 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
CSS0042629 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
CANSAT01G0370 Cannabis sativa HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
Cfa017557 Carpinus fangiana HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 56.5
Cfa017560 Carpinus fangiana HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 56.5
AUR62003693 Chenopodium quinoa HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 56.5
AUR62018004 Chenopodium quinoa HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 56.5
DCAR_011474 Daucus carota HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 56.5
FvH4_1g19240 Fragaria vesca HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
FAN19G0748 Fragaria x ananassa HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
Lj4A267T38 Lonicera japonica HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
Lju188A12T59 Lonicera japonica HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
Medtr5g031230 Medicago truncatula HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
Os04g0229100 Oryza sativa ssp. japonica HOM05D000258 ORTHO05D000153 5.1e-06 53.5 47 61.7
Phvul.003G287400 Phaseolus vulgaris HOM05D000258 ORTHO05D000153 5.1e-06 53.5 49 55.1
Potri.001G268600 Populus trichocarpa HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 60.9
Prupe.6G207300 Prunus persica HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
Prupe.6G208200 Prunus persica HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
QL06p036490 Quercus lobata HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
QL06p036580 Quercus lobata HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
QL06p036809 Quercus lobata HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 58.7
RcHm_v2.0_Chr2g0110471 Rosa chinensis HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 60.9
RcHm_v2.0_Chr5g0039381 Rosa chinensis HOM05D000258 ORTHO05D000153 5.1e-06 53.5 47 57.4
SHI21755 Sapria himalayana HOM05D000258 ORTHO05D000153 5.1e-06 53.5 47 61.7
TWI79G0999 Tripterygium wilfordii HOM05D000258 ORTHO05D000153 5.1e-06 53.5 47 55.3
TAR381G1632 Trochodendron aralioides HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 56.5
TAR628G0424 Trochodendron aralioides HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 56.5
TAR628G1390 Trochodendron aralioides HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 56.5
GSVIVG01002109001 Vitis vinifera HOM05D000258 ORTHO05D000153 5.1e-06 53.5 46 56.5
Actinidia28817 Actinidia chinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
CSS0013910 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 54.3
CSS0016418 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 56.5
CAN.G1829.3 Capsicum annuum HOM05D000258 ORTHO05D000153 6.7e-06 53.1 48 58.3
CAN.G1829.5 Capsicum annuum HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 56.5
COL.COLO4_11712 Corchorus olitorius HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
FvH4_1g19281 Fragaria vesca HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
FvH4_7g07240 Fragaria vesca HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
FAN03G1603 Fragaria x ananassa HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
FAN19G2245 Fragaria x ananassa HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
FAN23G1119 Fragaria x ananassa HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
FAN23G1383 Fragaria x ananassa HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
FAN26G2588 Fragaria x ananassa HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
FAN28G0798 Fragaria x ananassa HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
Gohir.A11G207900 Gossypium hirsutum HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 60.9
Gohir.A12G079300 Gossypium hirsutum HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 60.9
Hma1.2p1_2528F.1_g323930 Hydrangea macrophylla HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 56.5
Lalb_Chr16g0381541 Lupinus albus HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
Manes.02G206700 Manihot esculenta HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
Manes.02G206800 Manihot esculenta HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
Medtr5g031210 Medicago truncatula HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
Nitab4.5_0000402g0200 Nicotiana tabacum HOM05D000258 ORTHO05D000153 6.7e-06 53.1 48 58.3
Oeu003801.3 Olea europaea HOM05D000258 ORTHO05D000153 6.7e-06 53.1 50 54.0
QL01p024519 Quercus lobata HOM05D000258 ORTHO05D000153 6.7e-06 53.1 47 57.4
QL06p037053 Quercus lobata HOM05D000258 ORTHO05D000153 6.7e-06 53.1 47 57.4
RcHm_v2.0_Chr1g0314861 Rosa chinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
RcHm_v2.0_Chr1g0345621 Rosa chinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
RcHm_v2.0_Chr1g0345751 Rosa chinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
RcHm_v2.0_Chr1g0345861 Rosa chinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
RcHm_v2.0_Chr1g0345871 Rosa chinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
RcHm_v2.0_Chr1g0345891 Rosa chinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
RcHm_v2.0_Chr2g0094851 Rosa chinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
RcHm_v2.0_Chr2g0110531 Rosa chinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 56.5
RcHm_v2.0_Chr6g0270311 Rosa chinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
RcHm_v2.0_Chr6g0270411 Rosa chinensis HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
Sabra09G0046700 Salix brachista HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 63.0
SalBow5G0267 Salvia bowleyana HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
SalBow5G1020 Salvia bowleyana HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
SalBow5G1068 Salvia bowleyana HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
SalBow5G1175 Salvia bowleyana HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
SalBow5G2034 Salvia bowleyana HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
SalBow5G3223 Salvia bowleyana HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
SalBow5G3362 Salvia bowleyana HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
SalBow5G4748 Salvia bowleyana HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
Solyc11g011330.2 Solanum lycopersicum HOM05D000258 ORTHO05D000153 6.7e-06 53.1 48 58.3
Sopen11g006090 Solanum pennellii HOM05D000258 ORTHO05D000153 6.7e-06 53.1 48 58.3
PGSC0003DMG400009638 Solanum tuberosum HOM05D000258 ORTHO05D000153 6.7e-06 53.1 47 55.3
TAR376G0921 Trochodendron aralioides HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
GSVIVG01006308001 Vitis vinifera HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
GSVIVG01006458001 Vitis vinifera HOM05D000258 ORTHO05D000153 6.7e-06 53.1 46 58.7
A08p22990 Brassica napus HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 56.5
CSS0012945 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 8.7e-06 52.8 47 57.4
CSS0047557 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 58.7
DCAR_029111 Daucus carota HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 56.5
Dinv10973 Davidia involucrata HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 56.5
Eucgr.H04903 Eucalyptus grandis HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 56.5
FvH4_1g19261 Fragaria vesca HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 60.9
FAN28G1905 Fragaria x ananassa HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 60.9
FAN28G2729 Fragaria x ananassa HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 60.9
HanXRQChr05g0146561 Helianthus annuus HOM05D000258 ORTHO05D000153 8.7e-06 52.8 49 59.2
MD05G1034100 Malus domestica HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 56.5
Manes.02G206600 Manihot esculenta HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 58.7
Nitab4.5_0000402g0150 Nicotiana tabacum HOM05D000258 ORTHO05D000153 8.7e-06 52.8 48 58.3
Oeu037778.1 Olea europaea HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 56.5
Peaxi162Scf00583g00531 Petunia axillaris HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 56.5
Peaxi162Scf00913g00019 Petunia axillaris HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 58.7
Peaxi162Scf00913g00322 Petunia axillaris HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 60.9
Psat7g048880 Pisum sativum HOM05D000258 ORTHO05D000153 8.7e-06 52.8 48 58.3
PGR102G1546 Punica granatum HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 56.5
QL06p036556 Quercus lobata HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 54.3
Rhsim10G0174900 Rhododendron simsii HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 58.7
SalBow5G1888 Salvia bowleyana HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 56.5
PGSC0003DMG400016114 Solanum tuberosum HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 58.7
TPR.G27181 Trifolium pratense HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 60.9
TAR628G1356 Trochodendron aralioides HOM05D000258 ORTHO05D000153 8.7e-06 52.8 46 56.5


User provided reference genes

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