Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 1.0e-88 330.1 172 100.0
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 7.1e-66 254.2 172 81.4
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 1.2e-60 236.9 172 73.8
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 2.0e-60 236.1 172 70.9
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 4.2e-58 228.4 176 68.8
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 4.2e-58 228.4 174 74.1
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 7.1e-58 227.6 173 69.4
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 7.8e-57 224.2 175 70.9
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 7.8e-57 224.2 172 71.5
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.7e-56 223.0 177 70.1
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 3.0e-56 222.2 172 71.5
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 3.0e-56 222.2 174 67.8
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 8.7e-56 220.7 174 71.3
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 2.5e-55 219.2 173 69.4
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 5.6e-55 218.0 173 69.4
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 7.3e-55 217.6 172 70.3
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 9.6e-55 217.2 173 70.5
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 9.6e-55 217.2 175 71.4
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 1.6e-54 216.5 173 71.7
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 2.1e-54 216.1 172 68.6
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 4.8e-54 214.9 175 68.6
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 8.1e-54 214.2 175 68.6
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 8.1e-54 214.2 174 70.1
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 8.1e-54 214.2 174 69.0
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 1.1e-53 213.8 176 67.0
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.4e-53 213.4 178 69.7
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 1.8e-53 213.0 173 69.9
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 3.1e-53 212.2 176 67.0
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 3.1e-53 212.2 180 64.4
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 3.1e-53 212.2 180 66.1
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 3.1e-53 212.2 178 66.3
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 4.0e-53 211.8 175 69.1
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 5.3e-53 211.5 176 68.8
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 5.3e-53 211.5 176 68.8
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 5.3e-53 211.5 176 69.9
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 6.9e-53 211.1 174 67.8
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 6.9e-53 211.1 176 67.0
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 6.9e-53 211.1 185 68.1
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 1.5e-52 209.9 175 68.6
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 2.6e-52 209.1 180 63.3
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 2.6e-52 209.1 178 65.2
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 4.5e-52 208.4 176 69.3
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 5.8e-52 208.0 177 67.2
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 9.9e-52 207.2 183 68.3
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 6.4e-51 204.5 174 65.5
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 6.4e-51 204.5 174 65.5
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 8.4e-51 204.1 176 67.6
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.9e-50 203.0 175 66.9
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 3.2e-50 202.2 179 64.8
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 5.4e-50 201.4 166 69.3
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 5.4e-50 201.4 177 66.1
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 7.1e-50 201.1 178 66.3
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 1.2e-49 200.3 178 65.2
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 1.2e-49 200.3 174 66.1
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 1.6e-49 199.9 176 67.6
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.1e-49 199.5 177 65.0
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 2.1e-49 199.5 172 65.7
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.7e-49 199.1 177 65.0
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 2.7e-49 199.1 173 65.9
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 4.6e-49 198.4 173 65.3
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 4.6e-49 198.4 176 67.6
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 6.0e-49 198.0 169 66.3
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 3.9e-48 195.3 182 62.6
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 6.7e-48 194.5 175 66.3
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 8.7e-48 194.1 176 65.3
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.5e-47 193.4 177 63.8
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 3.3e-47 192.2 177 63.8
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 4.3e-47 191.8 178 62.9
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 5.6e-47 191.4 180 60.0
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 9.6e-47 190.7 170 65.3
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 2.1e-46 189.5 178 64.0
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 1.1e-45 187.2 181 63.5
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.1e-45 187.2 180 63.9
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.1e-45 187.2 127 75.6
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.8e-45 186.4 174 62.1
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.8e-45 186.4 191 60.2
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.8e-45 186.4 172 61.0
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 2.4e-45 186.0 180 60.0
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 5.3e-45 184.9 183 61.7
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 9.0e-45 184.1 191 59.7
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 9.0e-45 184.1 115 80.0
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.5e-44 183.3 177 62.7
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 2.0e-44 183.0 132 71.2
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.4e-44 182.2 174 62.1
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 4.5e-44 181.8 174 62.1
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.3e-43 180.3 183 59.6
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 1.7e-43 179.9 178 59.6
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 2.9e-43 179.1 182 60.4
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 4.9e-43 178.3 107 81.3
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 8.4e-43 177.6 103 86.4
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 2.4e-42 176.0 173 58.4
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 3.2e-42 175.6 129 73.6
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 9.3e-42 174.1 135 68.9
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 2.7e-41 172.6 126 70.6
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 4.6e-41 171.8 135 66.7
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 4.6e-41 171.8 136 69.1
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 7.9e-41 171.0 135 65.9
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 7.9e-41 171.0 177 56.5
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 1.0e-40 170.6 136 65.4
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 1.3e-40 170.2 136 66.2
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 2.3e-40 169.5 132 70.5
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 6.7e-40 167.9 176 56.8
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.1e-39 167.2 164 60.4
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 1.5e-39 166.8 175 57.1
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 1.9e-39 166.4 170 57.6
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 1.9e-39 166.4 170 57.6
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 2.5e-39 166.0 172 57.0
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 4.3e-39 165.2 166 60.2
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 7.4e-39 164.5 171 56.7
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 7.4e-39 164.5 171 56.7
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 1.3e-38 163.7 169 58.0
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.6e-38 163.3 170 57.1
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 2.1e-38 162.9 178 56.2
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 6.9e-37 157.9 170 55.3
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.9e-34 149.8 138 64.5
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.2e-33 147.1 143 57.3
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 1.2e-33 147.1 110 68.2
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 5.7e-31 138.3 85 81.2
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 4.8e-30 135.2 129 61.2
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 6.9e-29 131.3 135 52.6
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 3.4e-28 129.0 126 54.0
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 4.5e-28 128.6 171 44.4
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.1e-26 124.0 144 44.4
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 4.6e-25 118.6 172 43.6
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 2.4e-21 106.3 181 40.9
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 6.9e-21 104.8 105 47.6
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 5.9e-20 101.7 170 45.3
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 2.6e-15 86.3 141 47.5
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 4.8e-06 55.5 112 27.7


User provided reference genes

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