Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 3.6e-61 238.0 117 100.0
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 4.4e-59 231.1 117 97.4
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 7.5e-27 124.0 118 66.1
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 1.7e-26 122.9 117 62.4
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 1.1e-25 120.2 117 61.5
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 6.0e-24 114.4 106 58.5
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 7.8e-24 114.0 122 57.4
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 9.5e-22 107.1 115 53.0
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 1.2e-21 106.7 106 50.0
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 2.1e-21 105.9 125 49.6
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 2.8e-21 105.5 119 50.4
DCAR_023670 Daucus carota HOM05D006722 ORTHO05D007944 3.6e-21 105.1 121 53.7
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.4e-20 103.2 110 57.3
DCAR_006246 Daucus carota HOM05D006722 ORTHO05D007944 3.1e-20 102.1 106 51.9
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.5e-19 99.8 117 53.8
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 2.0e-19 99.4 97 56.7
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 2.6e-19 99.0 123 49.6
Cc05_g06730 Coffea canephora HOM05D006722 ORTHO05D007944 3.4e-19 98.6 121 51.2
PGSC0003DMG400018315 Solanum tuberosum HOM05D006722 ORTHO05D007944 3.4e-19 98.6 123 52.8
Actinidia09877 Actinidia chinensis HOM05D006722 ORTHO05D007944 3.7e-18 95.1 127 44.9
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 4.9e-18 94.7 109 54.1
Nitab4.5_0005380g0010 Nicotiana tabacum HOM05D006722 ORTHO05D007944 4.9e-18 94.7 96 55.2
Rhsim04G0066600 Rhododendron simsii HOM05D006722 ORTHO05D007944 6.4e-18 94.4 107 53.3
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 8.3e-18 94.0 123 48.8
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 5.4e-17 91.3 110 51.8
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 1.2e-16 90.1 113 50.4
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 1.2e-16 90.1 101 49.5
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 1.2e-16 90.1 121 51.2
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 2.1e-16 89.4 103 49.5
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 3.9e-15 85.1 119 46.2
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 8.6e-15 84.0 90 53.3
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 8.6e-15 84.0 127 43.3
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 7.3e-14 80.9 111 43.2
Lsat_1_v5_gn_4_70120 Lactuca sativa HOM05D006722 ORTHO05D007944 9.5e-14 80.5 108 48.1
BcaC07g41191 Brassica carinata HOM05D006722 ORTHO05D007944 1.6e-13 79.7 118 44.1
C08p41970 Brassica napus HOM05D006722 ORTHO05D007944 1.6e-13 79.7 118 44.1
BolC8t51760H Brassica oleracea HOM05D006722 ORTHO05D007944 1.6e-13 79.7 118 44.1
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 2.1e-13 79.3 99 52.5
A09p58680 Brassica napus HOM05D006722 ORTHO05D007944 3.6e-13 78.6 125 41.6
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 3.6e-13 78.6 120 46.7
BraA09t41254Z Brassica rapa HOM05D006722 ORTHO05D007944 4.7e-13 78.2 125 41.6
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 4.7e-13 78.2 120 46.7
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 6.2e-13 77.8 120 46.7
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 6.2e-13 77.8 120 46.7
BcaB08g34945 Brassica carinata HOM05D006722 ORTHO05D007944 8.1e-13 77.4 125 41.6
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 1.4e-12 76.6 125 40.8
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 1.8e-12 76.3 108 46.3
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 2.3e-12 75.9 107 45.8
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 3.1e-12 75.5 115 42.6
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 4.0e-12 75.1 99 45.5
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 6.8e-12 74.3 111 44.1
SalBow1G4058 Salvia bowleyana HOM05D006722 ORTHO05D007944 6.8e-12 74.3 70 61.4
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 1.2e-11 73.6 122 44.3
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 2.6e-11 72.4 148 37.8
Actinidia11069 Actinidia chinensis HOM05D006722 ORTHO05D007944 3.4e-11 72.0 88 50.0
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 3.4e-11 72.0 120 42.5
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 5.8e-11 71.2 115 44.3
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 5.8e-11 71.2 110 44.5
Gohir.D06G117266 Gossypium hirsutum HOM05D006722 ORTHO05D007944 7.5e-11 70.9 121 43.0
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 7.5e-11 70.9 118 42.4
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 2.2e-10 69.3 125 40.0
AT2G20870 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 3.7e-10 68.6 125 39.2
Gohir.D01G197650 Gossypium hirsutum HOM05D006722 ORTHO05D007944 4.9e-10 68.2 121 42.1
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 6.4e-10 67.8 107 43.9
AL3G54120 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 8.3e-10 67.4 125 38.4
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 8.3e-10 67.4 105 46.7
CARHR111610 Cardamine hirsuta HOM05D006722 ORTHO05D007944 1.1e-09 67.0 109 44.0
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 1.9e-09 66.2 144 38.2
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 1.9e-09 66.2 111 45.0
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 2.4e-09 65.9 105 45.7
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 2.4e-09 65.9 119 42.9
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 3.2e-09 65.5 114 43.0
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 5.4e-09 64.7 101 44.6
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 7.1e-09 64.3 117 40.2
THA.LOC104824711 Tarenaya hassleriana HOM05D006722 ORTHO05D007944 1.2e-08 63.5 104 47.1
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 1.0e-07 60.5 96 47.9
Os07g0565800 Oryza sativa ssp. japonica HOM05D026263 ORTHO05D007944 1.7e-07 59.7 89 48.3
Phvul.011G113200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 2.3e-07 59.3 134 37.3
Lalb_Chr19g0135361 Lupinus albus HOM05D006722 ORTHO05D007944 3.0e-07 58.9 101 45.5
Zm00001eb324500 Zea mays HOM05D026263 ORTHO05D007944 3.0e-07 58.9 89 48.3
Actinidia11070 Actinidia chinensis HOM05D006722 ORTHO05D007944 6.6e-07 57.8 65 50.8
Manes.13G149300 Manihot esculenta HOM05D006722 ORTHO05D007944 6.6e-07 57.8 132 36.4
Gohir.D12G141100 Gossypium hirsutum HOM05D006722 ORTHO05D007944 8.6e-07 57.4 93 43.0
Psat5g270720 Pisum sativum HOM05D006722 ORTHO05D007944 1.1e-06 57.0 109 41.3
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.5e-06 56.6 118 39.0
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 1.5e-06 56.6 118 39.0
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 1.5e-06 56.6 118 39.0
Hma1.2p1_0875F.1_g231430 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 1.5e-06 56.6 106 43.4
Ca_01515_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 1.9e-06 56.2 94 42.6
Zm00001eb107100 Zea mays HOM05D026263 ORTHO05D007944 2.5e-06 55.8 88 46.6
ClCG02G017440 Citrullus lanatus HOM05D006722 ORTHO05D007944 5.6e-06 54.7 106 37.7


User provided reference genes

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