Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 1.8e-87 325.9 158 100.0
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 1.1e-68 263.5 158 78.5
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 1.2e-67 260.0 153 79.7
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 3.4e-67 258.5 154 79.2
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 7.7e-67 257.3 158 75.9
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 1.3e-66 256.5 154 78.6
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 5.0e-66 254.6 152 77.6
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 6.5e-66 254.2 159 76.7
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 1.1e-65 253.4 156 75.6
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 1.4e-65 253.1 153 77.8
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 4.2e-65 251.5 156 79.5
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 4.2e-65 251.5 154 79.2
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 5.5e-65 251.1 158 75.9
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 7.2e-65 250.8 158 75.9
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 1.2e-64 250.0 158 73.4
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 1.2e-64 250.0 158 74.1
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 2.7e-64 248.8 160 75.6
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 2.7e-64 248.8 153 77.1
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 2.7e-64 248.8 154 77.3
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 3.6e-64 248.4 158 74.1
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 3.0e-63 245.4 155 74.8
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 5.1e-63 244.6 155 72.3
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 8.8e-63 243.8 153 74.5
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 1.1e-62 243.4 155 72.3
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 1.5e-62 243.0 159 71.1
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 2.0e-62 242.7 158 73.4
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 3.3e-62 241.9 159 74.8
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 4.4e-62 241.5 170 70.0
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 1.3e-61 240.0 155 73.5
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 1.7e-61 239.6 155 72.9
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 2.2e-61 239.2 154 73.4
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 3.7e-61 238.4 151 76.2
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 4.1e-60 235.0 154 70.1
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 5.3e-60 234.6 157 65.6
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 7.0e-60 234.2 151 76.2
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 9.1e-60 233.8 156 72.4
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 1.2e-59 233.4 154 73.4
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 2.0e-59 232.6 157 66.9
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 4.5e-59 231.5 156 71.2
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 7.7e-59 230.7 149 71.1
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 2.2e-58 229.2 154 69.5
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 2.2e-58 229.2 150 74.7
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 2.2e-58 229.2 150 74.7
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 2.9e-58 228.8 155 71.6
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 6.5e-58 227.6 155 72.9
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 8.5e-58 227.3 150 70.0
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 1.5e-57 226.5 158 70.3
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 2.5e-57 225.7 155 69.0
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 2.5e-57 225.7 154 67.5
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 2.5e-57 225.7 154 68.2
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 2.5e-57 225.7 154 66.9
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 5.5e-57 224.6 150 70.0
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 5.5e-57 224.6 155 71.6
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 5.5e-57 224.6 135 80.0
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 7.2e-57 224.2 154 71.4
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 9.4e-57 223.8 150 71.3
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 9.4e-57 223.8 154 67.5
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 1.2e-56 223.4 155 71.6
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 1.2e-56 223.4 155 68.4
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 1.6e-56 223.0 148 70.9
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 2.1e-56 222.6 150 70.0
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 2.1e-56 222.6 149 69.1
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 2.7e-56 222.2 154 66.2
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 3.6e-56 221.9 149 71.1
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 3.6e-56 221.9 149 72.5
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 4.7e-56 221.5 150 69.3
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 4.7e-56 221.5 158 67.7
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 6.1e-56 221.1 155 70.3
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 6.1e-56 221.1 149 69.8
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 8.0e-56 220.7 155 70.3
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 1.4e-55 219.9 149 70.5
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 1.4e-55 219.9 155 71.0
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 1.8e-55 219.5 154 68.2
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 6.7e-55 217.6 150 69.3
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 2.0e-54 216.1 151 64.9
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 2.6e-54 215.7 155 65.8
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 2.6e-54 215.7 133 73.7
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 3.3e-54 215.3 165 62.4
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 5.7e-54 214.5 159 66.7
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 1.7e-53 213.0 159 66.0
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 2.8e-53 212.2 153 67.3
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 4.8e-53 211.5 155 69.0
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 1.1e-52 210.3 154 66.2
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 1.1e-52 210.3 154 66.2
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 2.4e-52 209.1 155 66.5
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 3.1e-52 208.8 150 68.7
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 3.1e-52 208.8 150 68.0
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 7.7e-51 204.1 154 65.6
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 5.0e-50 201.4 153 63.4
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 2.5e-49 199.1 144 68.1
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 3.2e-49 198.7 179 59.2
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 2.7e-48 195.7 153 58.8
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 3.0e-47 192.2 139 68.3
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 4.1e-44 181.8 153 58.8
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.6e-43 179.9 132 65.9
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 3.8e-42 175.3 151 55.0
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 2.5e-41 172.6 151 54.3
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 6.8e-39 164.5 97 79.4
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 2.8e-37 159.1 152 55.3
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 8.3e-37 157.5 164 48.8
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 2.0e-35 152.9 90 81.1
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 5.0e-34 148.3 93 74.2
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 8.6e-34 147.5 102 70.6
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 2.5e-33 146.0 100 71.0
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 1.6e-32 143.3 146 50.0
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 7.5e-30 134.4 78 80.8
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 1.3e-26 123.6 81 71.6
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 1.3e-26 123.6 81 71.6
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 6.2e-24 114.8 80 65.0
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 2.3e-23 112.8 77 70.1
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 3.1e-23 112.5 81 66.7
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 4.1e-20 102.1 86 59.3
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 7.3e-17 91.3 67 61.2
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 1.6e-16 90.1 132 40.2
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 1.1e-15 87.4 57 70.2
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 2.6e-14 82.8 70 52.9
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 4.3e-09 65.5 78 44.9
Cre17.g705950 Chlamydomonas reinhardtii HOM05D007014 ORTHO05D008894 1.6e-08 63.5 124 32.3
Hund03009 Selenicereus undatus HOM05D004398 ORTHO05D005268 3.4e-06 55.8 91 35.2
Phvul.008G289800 Phaseolus vulgaris HOM05D004398 ORTHO05D005268 4.4e-06 55.5 94 31.9
VMungo0647G1556 Vigna mungo HOM05D004398 ORTHO05D005268 4.4e-06 55.5 94 31.9
Sed0003647 Sechium edule HOM05D004398 ORTHO05D005268 9.9e-06 54.3 91 35.2


User provided reference genes

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