Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 5.0e-51 204.1 103 100.0
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 4.7e-25 117.9 74 78.4
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 7.6e-23 110.5 72 75.0
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 2.2e-22 109.0 74 71.6
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 3.8e-22 108.2 72 70.8
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 3.8e-22 108.2 72 75.0
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 3.8e-22 108.2 72 72.2
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 3.8e-22 108.2 74 68.9
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 6.4e-22 107.5 72 70.8
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 8.4e-22 107.1 74 70.3
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 8.4e-22 107.1 74 70.3
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 1.1e-21 106.7 72 75.0
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 1.4e-21 106.3 72 70.8
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 1.9e-21 105.9 72 69.4
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.4e-21 105.5 74 64.9
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 3.2e-21 105.1 74 67.6
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 3.2e-21 105.1 74 67.6
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 7.1e-21 104.0 72 69.4
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 1.2e-20 103.2 72 69.4
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 1.2e-20 103.2 74 66.2
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 1.2e-20 103.2 71 69.0
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 1.6e-20 102.8 72 70.8
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 1.6e-20 102.8 74 62.2
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.6e-20 102.8 74 62.2
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 1.6e-20 102.8 74 60.8
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 1.6e-20 102.8 72 68.1
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 2.1e-20 102.4 74 62.2
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 2.7e-20 102.1 74 62.2
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.7e-20 102.1 74 62.2
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 4.6e-20 101.3 74 60.8
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 4.6e-20 101.3 74 64.9
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 6.0e-20 100.9 68 69.1
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 7.8e-20 100.5 72 63.9
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 7.8e-20 100.5 72 63.9
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 7.8e-20 100.5 74 63.5
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 1.3e-19 99.8 72 65.3
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.7e-19 99.4 74 64.9
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.7e-19 99.4 72 63.9
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 2.3e-19 99.0 72 66.7
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 2.3e-19 99.0 72 63.9
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 3.0e-19 98.6 72 62.5
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 3.9e-19 98.2 70 64.3
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 5.1e-19 97.8 72 62.5
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 5.1e-19 97.8 74 63.5
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 5.1e-19 97.8 74 63.5
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 6.6e-19 97.4 72 62.5
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 8.7e-19 97.1 72 63.9
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 1.1e-18 96.7 72 62.5
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 1.1e-18 96.7 67 65.7
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 1.1e-18 96.7 72 65.3
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 1.5e-18 96.3 71 62.0
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 1.5e-18 96.3 72 63.9
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 1.9e-18 95.9 74 64.9
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 2.5e-18 95.5 72 62.5
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 3.3e-18 95.1 73 64.4
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 4.3e-18 94.7 74 58.1
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 5.6e-18 94.4 72 61.1
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 5.6e-18 94.4 67 64.2
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 9.6e-18 93.6 72 61.1
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 2.8e-17 92.0 71 63.4
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 3.6e-17 91.7 72 59.7
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 3.6e-17 91.7 74 56.8
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 4.8e-17 91.3 72 58.3
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 8.1e-17 90.5 72 59.7
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 1.4e-16 89.7 72 56.9
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 2.4e-16 89.0 72 61.1
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 2.4e-16 89.0 72 58.3
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 4.0e-16 88.2 72 56.9
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 5.3e-16 87.8 64 65.6
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 9.0e-16 87.0 72 56.9
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 9.0e-16 87.0 72 58.3
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 2.0e-15 85.9 72 55.6
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 2.0e-15 85.9 72 55.6
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 2.0e-15 85.9 72 55.6
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 2.0e-15 85.9 72 54.2
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 2.6e-15 85.5 72 55.6
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 2.6e-15 85.5 72 55.6
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 2.6e-15 85.5 72 55.6
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 2.6e-15 85.5 72 52.8
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 3.4e-15 85.1 72 55.6
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 3.4e-15 85.1 74 56.8
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 4.4e-15 84.7 72 55.6
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 4.4e-15 84.7 72 55.6
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 5.8e-15 84.3 72 54.2
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 1.7e-14 82.8 72 55.6
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 2.2e-14 82.4 71 56.3
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 2.9e-14 82.0 72 55.6
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 3.8e-14 81.6 72 59.7
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 2.4e-13 79.0 65 60.0
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 5.4e-13 77.8 72 51.4
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 7.1e-13 77.4 72 50.0
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 9.3e-13 77.0 72 50.0
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 1.2e-12 76.6 72 52.8
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 3.3e-10 68.6 56 57.1
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 4.3e-10 68.2 71 45.1
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 9.6e-10 67.0 75 49.3
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 1.3e-09 66.6 74 43.2


User provided reference genes

Program Settings