Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029773.2 Olea europaea HOM05D007551 ORTHO05D009424 3.5e-166 589.7 307 100.0
Oeu040609.1 Olea europaea HOM05D007551 ORTHO05D009424 5.3e-138 496.1 306 86.6
Migut.E01387 Erythranthe guttata HOM05D007551 ORTHO05D009424 1.7e-72 278.5 290 52.8
SGA_v2.0_scaffold121G33050 Striga asiatica HOM05D007551 ORTHO05D009424 2.5e-71 274.6 311 52.1
MSTRG.1750 Avicennia marina HOM05D007551 ORTHO05D009424 3.6e-70 270.8 309 53.4
SalBow1G3247 Salvia bowleyana HOM05D007551 ORTHO05D009424 2.4e-69 268.1 312 51.6
SalBow8G4006 Salvia bowleyana HOM05D007551 ORTHO05D009424 2.4e-69 268.1 312 51.6
Sopen11g001880 Solanum pennellii HOM05D007551 ORTHO05D009424 4.6e-65 253.8 307 49.2
Nitab4.5_0000856g0020 Nicotiana tabacum HOM05D007551 ORTHO05D009424 1.7e-64 251.9 307 50.8
Dinv37453 Davidia involucrata HOM05D007551 ORTHO05D009424 3.0e-64 251.1 307 49.5
Nitab4.5_0002667g0100 Nicotiana tabacum HOM05D007551 ORTHO05D009424 8.7e-64 249.6 307 50.5
Solyc11g005940.3 Solanum lycopersicum HOM05D007551 ORTHO05D009424 1.1e-63 249.2 307 48.5
PGSC0003DMG402028683 Solanum tuberosum HOM05D007551 ORTHO05D009424 1.5e-63 248.8 307 49.5
Rhsim04G0146500 Rhododendron simsii HOM05D007551 ORTHO05D009424 4.8e-62 243.8 251 54.6
TAR633G1897 Trochodendron aralioides HOM05D007551 ORTHO05D009424 1.4e-61 242.3 308 49.0
Peaxi162Scf00619g00022 Petunia axillaris HOM05D007551 ORTHO05D009424 1.5e-60 238.8 234 55.1
CAN.G652.9 Capsicum annuum HOM05D007551 ORTHO05D009424 4.5e-60 237.3 305 49.2
Hma1.2p1_0294F.1_g116420 Hydrangea macrophylla HOM05D007551 ORTHO05D009424 2.9e-59 234.6 304 48.0
Cc00_g20060 Coffea canephora HOM05D007551 ORTHO05D009424 3.5e-57 227.6 325 46.2
QL11p054679 Quercus lobata HOM05D007551 ORTHO05D009424 3.5e-57 227.6 308 47.7
TAR362G0203 Trochodendron aralioides HOM05D007551 ORTHO05D009424 3.5e-57 227.6 240 54.6
FvH4_5g24430 Fragaria vesca HOM05D007551 ORTHO05D009424 6.0e-57 226.9 228 53.5
FAN13G0867 Fragaria x ananassa HOM05D007551 ORTHO05D009424 1.3e-56 225.7 305 44.3
Prupe.3G018200 Prunus persica HOM05D007551 ORTHO05D009424 2.3e-56 224.9 305 44.9
Oeu044967.1 Olea europaea HOM05D007551 ORTHO05D009424 3.9e-56 224.2 137 86.1
CiPaw.12G053700 Carya illinoinensis HOM05D007551 ORTHO05D009424 1.6e-54 218.8 305 45.2
GSVIVG01036918001 Vitis vinifera HOM05D007551 ORTHO05D009424 1.1e-53 216.1 250 49.6
Ciclev10000274m.g Citrus clementina HOM05D007551 ORTHO05D009424 1.4e-53 215.7 229 52.4
Lsat_1_v5_gn_6_75081 Lactuca sativa HOM05D007551 ORTHO05D009424 2.4e-53 214.9 268 45.5
Ah.12g056170 Amaranthus hybridus HOM05D000351 ORTHO05D009424 6.9e-53 213.4 238 50.0
EL10Ac5g11872 Beta vulgaris HOM05D007551 ORTHO05D009424 6.9e-53 213.4 247 48.6
Cfa012637 Carpinus fangiana HOM05D007551 ORTHO05D009424 9.0e-53 213.0 228 51.8
Atru.chr6.2125 Acer truncatum HOM05D007551 ORTHO05D009424 1.5e-52 212.2 231 50.2
TWI60G1073 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 4.5e-52 210.7 283 47.3
Nn1g00676 Nelumbo nucifera HOM05D007551 ORTHO05D009424 5.8e-52 210.3 239 50.6
RcHm_v2.0_Chr7g0214821 Rosa chinensis HOM05D007551 ORTHO05D009424 5.8e-52 210.3 227 49.3
ClCG07G011220 Citrullus lanatus HOM05D007551 ORTHO05D009424 7.6e-52 209.9 229 51.5
TWI34G0706 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 7.6e-52 209.9 228 53.5
MD06G1022200 Malus domestica HOM05D007551 ORTHO05D009424 1.7e-51 208.8 244 48.4
Nn6g33703 Nelumbo nucifera HOM05D007551 ORTHO05D009424 3.8e-51 207.6 238 51.3
Sed0007434 Sechium edule HOM05D007551 ORTHO05D009424 7.1e-50 203.4 232 51.7
MELO3C016242.2 Cucumis melo HOM05D007551 ORTHO05D009424 1.6e-49 202.2 228 51.3
CsaV3_4G007030 Cucumis sativus L. HOM05D007551 ORTHO05D009424 1.6e-49 202.2 230 51.3
Sed0011000 Sechium edule HOM05D007551 ORTHO05D009424 4.6e-49 200.7 229 50.7
Sc07g0008330 Simmondsia chinensis HOM05D007551 ORTHO05D009424 1.8e-48 198.7 231 46.3
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 8.7e-48 196.4 229 52.0
Gohir.A12G200366 Gossypium hirsutum HOM05D007551 ORTHO05D009424 7.4e-47 193.4 307 41.4
Gorai.N026600 Gossypium raimondii HOM05D007551 ORTHO05D009424 9.6e-47 193.0 307 41.4
PGR042G1889 Punica granatum HOM05D007551 ORTHO05D009424 1.3e-46 192.6 291 43.6
Haze_08024 Corylus avellana HOM05D007551 ORTHO05D009424 1.6e-46 192.2 209 50.7
FvH4_4g10440 Fragaria vesca HOM05D007551 ORTHO05D009424 4.8e-46 190.7 234 46.2
Glyma.16G058700 Glycine max HOM05D007551 ORTHO05D009424 1.1e-45 189.5 230 46.5
FvH4_4g10410 Fragaria vesca HOM05D007551 ORTHO05D009424 4.0e-45 187.6 234 45.7
VMungo0251G2062 Vigna mungo HOM05D007551 ORTHO05D009424 4.0e-45 187.6 225 46.2
RcHm_v2.0_Chr4g0405931 Rosa chinensis HOM05D007551 ORTHO05D009424 4.5e-44 184.1 233 43.8
PSO210G4217 Papaver somniferum HOM05D007551 ORTHO05D009424 5.8e-44 183.7 254 43.7
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 7.6e-44 183.3 229 48.0
ECA240G1023 Erigeron canadensis HOM05D000046 ORTHO05D000457 7.6e-44 183.3 208 45.7
AL7G34670 Arabidopsis lyrata HOM05D007551 ORTHO05D009424 1.0e-43 183.0 234 45.3
Gohir.D12G203200 Gossypium hirsutum HOM05D007551 ORTHO05D009424 1.7e-43 182.2 307 39.7
Lalb_Chr09g0334421 Lupinus albus HOM05D007551 ORTHO05D009424 2.2e-43 181.8 225 48.4
PSO210G5788 Papaver somniferum HOM05D007551 ORTHO05D009424 6.5e-43 180.3 234 46.2
Manes.17G006200 Manihot esculenta HOM05D007551 ORTHO05D009424 2.5e-42 178.3 262 46.6
RcHm_v2.0_Chr7g0219861 Rosa chinensis HOM05D007551 ORTHO05D009424 2.5e-42 178.3 230 45.2
Eucgr.E01036 Eucalyptus grandis HOM05D007551 ORTHO05D009424 5.5e-42 177.2 318 40.9
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 6.0e-41 173.7 233 43.8
Carub.0007s2177 Capsella rubella HOM05D007551 ORTHO05D009424 1.0e-40 172.9 235 45.5
Lj4g0019089 Lotus japonicus HOM05D007551 ORTHO05D009424 1.8e-40 172.2 223 45.3
Sp7g18060 Schrenkiella parvula HOM05D007551 ORTHO05D009424 2.3e-40 171.8 234 43.6
AT4G19440 Arabidopsis thaliana HOM05D007551 ORTHO05D009424 3.0e-40 171.4 235 46.0
Potri.003G105700 Populus trichocarpa HOM05D007551 ORTHO05D009424 6.7e-40 170.2 274 44.2
BcaB03g11619 Brassica carinata HOM05D007551 ORTHO05D009424 1.1e-39 169.5 231 45.5
Aa31LG6G2050 Aethionema arabicum HOM05D007551 ORTHO05D009424 3.3e-39 167.9 226 44.2
Thhalv10024401m.g Eutrema salsugineum HOM05D007551 ORTHO05D009424 4.3e-39 167.5 232 44.0
AUR62044750 Chenopodium quinoa HOM05D007551 ORTHO05D009424 2.2e-38 165.2 172 52.9
Phvul.003G277400 Phaseolus vulgaris HOM05D007551 ORTHO05D009424 2.2e-38 165.2 225 40.9
Sabra03G0072700 Salix brachista HOM05D007551 ORTHO05D009424 6.3e-38 163.7 267 44.9
Aqoxy2G03897 Aquilegia oxysepala HOM05D007551 ORTHO05D009424 1.7e-35 155.6 180 48.9
CSS0008559 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 2.3e-32 145.2 138 56.5
CSS0048505 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 3.9e-32 144.4 138 56.5
Lj8C372G5 Lonicera japonica HOM05D007551 ORTHO05D009424 4.3e-31 141.0 115 61.7
Cpa.g.c44844 Carica papaya HOM05D007551 ORTHO05D009424 7.4e-31 140.2 157 50.3
FAN04G0939 Fragaria x ananassa HOM05D007551 ORTHO05D009424 6.3e-30 137.1 228 38.2
Cpa.g.sc3.432 Carica papaya HOM05D007551 ORTHO05D009424 2.6e-28 131.7 103 63.1
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 2.9e-27 128.3 200 39.0
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 2.1e-25 122.1 200 37.5
Lalb_Chr05g0229381 Lupinus albus HOM05D007551 ORTHO05D009424 2.1e-25 122.1 126 52.4
Medtr8g071970 Medicago truncatula HOM05D007551 ORTHO05D009424 3.6e-25 121.3 205 40.5
Psat4g109680 Pisum sativum HOM05D007551 ORTHO05D009424 3.9e-24 117.9 180 41.7
TPR.G16813 Trifolium pratense HOM05D007551 ORTHO05D009424 2.6e-23 115.2 185 42.2
HPP92_013860 Vanilla planifolia HOM05D007551 ORTHO05D009424 4.1e-21 107.8 275 30.2
CARHR226230 Cardamine hirsuta HOM05D007551 ORTHO05D009424 1.1e-18 99.8 251 32.7
SalBow8G0178 Salvia bowleyana HOM05D007551 ORTHO05D009424 4.7e-17 94.4 77 62.3
MD16G1287400 Malus domestica HOM05D007551 ORTHO05D009424 5.2e-16 90.9 70 61.4
SEGI_12196 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 4.1e-13 81.3 214 31.8
ATR0626G221 Amborella trichopoda HOM05D007551 ORTHO05D009424 4.5e-12 77.8 184 33.7
Aqoxy1G00452 Aquilegia oxysepala HOM05D007455 ORTHO05D009431 1.7e-11 75.9 183 31.7
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 1.5e-10 72.8 240 29.2
Rhsim13G0211000 Rhododendron simsii HOM05D007455 ORTHO05D009431 3.2e-10 71.6 182 30.2
SEGI_04297 Sequoiadendron giganteum HOM05D007212 ORTHO05D009094 7.2e-10 70.5 219 26.0
Oeu041026.1 Olea europaea HOM05D007212 ORTHO05D009094 9.4e-10 70.1 262 26.0
Atru.BG.247.p Acer truncatum HOM05D007639 ORTHO05D009509 1.6e-09 69.3 188 29.8
FAN17G3133 Fragaria x ananassa HOM05D007551 ORTHO05D009424 2.7e-09 68.6 51 58.8
Lalb_Chr02g0154661 Lupinus albus HOM05D007291 ORTHO05D009038 4.7e-09 67.8 196 29.6
PSO017G5257 Papaver somniferum HOM05D007545 ORTHO05D009579 8.0e-09 67.0 206 28.2
SEGI_02979 Sequoiadendron giganteum HOM05D007551 ORTHO05D006600 8.0e-09 67.0 221 26.2
HPP92_001923 Vanilla planifolia HOM05D007455 ORTHO05D009431 1.0e-08 66.6 190 28.4
Migut.D02115 Erythranthe guttata HOM05D007212 ORTHO05D009094 1.4e-08 66.2 226 25.7
PSO017G0179 Papaver somniferum HOM05D005764 ORTHO05D006600 1.4e-08 66.2 185 30.3
Ca_22472_v3 Cicer arietinum L. HOM05D007551 ORTHO05D009424 1.8e-08 65.9 53 60.4
Rhsim08G0018600 Rhododendron simsii HOM05D001542 ORTHO05D001416 2.3e-08 65.5 205 27.3
HPP92_013845 Vanilla planifolia HOM05D007551 ORTHO05D009424 2.3e-08 65.5 100 35.0
ClCG02G014020 Citrullus lanatus HOM05D005764 ORTHO05D006600 6.7e-08 63.9 189 30.2
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 6.7e-08 63.9 194 29.4
Ca_00776_v3 Cicer arietinum L. HOM05D000091 ORTHO05D009038 1.2e-07 63.2 183 32.8
TPR.G8243 Trifolium pratense HOM05D007291 ORTHO05D009038 1.2e-07 63.2 210 29.5
PSO478G2209 Papaver somniferum HOM05D007545 ORTHO05D009579 1.5e-07 62.8 210 26.7
TAR623G1496 Trochodendron aralioides HOM05D007750 ORTHO05D009803 1.5e-07 62.8 200 28.0
Eucgr.J02064 Eucalyptus grandis HOM05D007212 ORTHO05D009094 2.0e-07 62.4 223 29.6
SalBow7G4426 Salvia bowleyana HOM05D007639 ORTHO05D009509 2.0e-07 62.4 192 27.1
GSVIVG01024955001 Vitis vinifera HOM05D007750 ORTHO05D009803 2.6e-07 62.0 190 28.9
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 3.3e-07 61.6 189 30.2
SHI30104 Sapria himalayana HOM05D007291 ORTHO05D009038 3.3e-07 61.6 197 24.4
SEGI_33147 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 3.3e-07 61.6 189 27.5
SEGI_07640 Sequoiadendron giganteum HOM05D007763 ORTHO05D009537 5.7e-07 60.8 198 26.8
QL04p014212 Quercus lobata HOM05D007455 ORTHO05D009431 7.5e-07 60.5 174 27.0
AUR62036473 Chenopodium quinoa HOM05D007390 ORTHO05D009114 9.7e-07 60.1 189 26.5
Lsat_1_v5_gn_4_84661 Lactuca sativa HOM05D005764 ORTHO05D006600 9.7e-07 60.1 221 25.3
Potri.001G276500 Populus trichocarpa HOM05D007455 ORTHO05D009431 9.7e-07 60.1 172 28.5
Peaxi162Scf01229g00021 Petunia axillaris HOM05D007455 ORTHO05D009431 1.3e-06 59.7 109 37.6
SalBow3G0436 Salvia bowleyana HOM05D007212 ORTHO05D009094 1.3e-06 59.7 224 25.4
PGSC0003DMG401009622 Solanum tuberosum HOM05D007455 ORTHO05D009431 1.3e-06 59.7 190 28.9
Aqoxy1G00124 Aquilegia oxysepala HOM05D004824 ORTHO05D003903 1.7e-06 59.3 180 26.1
CiPaw.01G118600 Carya illinoinensis HOM05D007291 ORTHO05D009038 1.7e-06 59.3 189 28.6
Ca_26721_v3 Cicer arietinum L. HOM05D007291 ORTHO05D009038 1.7e-06 59.3 183 32.2
Manes.12G124600 Manihot esculenta HOM05D003210 ORTHO05D000001 1.7e-06 59.3 226 24.3
PSO339G3988 Papaver somniferum HOM05D007212 ORTHO05D009094 1.7e-06 59.3 191 27.7
CSS0009024 Camellia sinensis var. sinensis HOM05D007956 ORTHO05D009038 2.2e-06 58.9 187 26.7
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 2.2e-06 58.9 232 25.4
vmacro04677 Vaccinium macrocarpon HOM05D004824 ORTHO05D003903 2.2e-06 58.9 169 27.8
CSS0028051 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 2.8e-06 58.5 180 26.7
ClCG01G008820 Citrullus lanatus HOM05D007291 ORTHO05D009038 2.8e-06 58.5 214 26.6
Cc00_g12250 Coffea canephora HOM05D005764 ORTHO05D006600 2.8e-06 58.5 190 26.8
Phvul.004G009900 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 2.8e-06 58.5 233 27.0
CSS0037746 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 3.7e-06 58.2 194 27.8
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 3.7e-06 58.2 210 25.7
ATR0829G190 Amborella trichopoda HOM05D007291 ORTHO05D009038 4.8e-06 57.8 185 27.6
Haze_24099 Corylus avellana HOM05D007750 ORTHO05D009803 4.8e-06 57.8 190 27.4
CsaV3_5G006140 Cucumis sativus L. HOM05D005764 ORTHO05D006600 4.8e-06 57.8 191 28.8
RcHm_v2.0_Chr7g0231271 Rosa chinensis HOM05D007291 ORTHO05D009038 4.8e-06 57.8 196 28.1
HPP92_001299 Vanilla planifolia HOM05D007291 ORTHO05D009038 4.8e-06 57.8 268 25.7
Atru.chr13.2096 Acer truncatum HOM05D007291 ORTHO05D009038 6.3e-06 57.4 185 28.1
MSTRG.10708 Avicennia marina HOM05D007291 ORTHO05D009038 6.3e-06 57.4 231 28.6
Cpa.g.sc116.47 Carica papaya HOM05D007291 ORTHO05D009038 6.3e-06 57.4 213 29.1
ECA246G4229 Erigeron canadensis HOM05D000587 ORTHO05D009114 6.3e-06 57.4 194 29.4
Eucgr.C02447 Eucalyptus grandis HOM05D007455 ORTHO05D009431 6.3e-06 57.4 166 27.7
HanXRQChr05g0162401 Helianthus annuus HOM05D007390 ORTHO05D009114 6.3e-06 57.4 189 28.0
Rhsim13G0082600 Rhododendron simsii HOM05D007750 ORTHO05D009803 6.3e-06 57.4 78 35.9
Sabra04G0061000 Salix brachista HOM05D007291 ORTHO05D009038 6.3e-06 57.4 195 28.2
PGSC0003DMG402030517 Solanum tuberosum HOM05D007426 ORTHO05D009167 6.3e-06 57.4 186 22.6
Gohir.D08G049200 Gossypium hirsutum HOM05D007545 ORTHO05D009579 8.3e-06 57.0 233 26.6
Phvul.004G009945 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 8.3e-06 57.0 231 26.0
vmacro19173 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 8.3e-06 57.0 200 29.5


User provided reference genes

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