Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029744.1 Olea europaea HOM05D006997 ORTHO05D008713 1.1e-110 403.3 196 100.0
Thecc.08G101800 Theobroma cacao HOM05D006997 ORTHO05D008713 1.5e-104 382.9 189 96.3
Hma1.2p1_1613F.1_g293656 Hydrangea macrophylla HOM05D006997 ORTHO05D008713 2.6e-104 382.1 189 97.4
Ciclev10001423m.g Citrus clementina HOM05D006997 ORTHO05D008713 5.7e-104 380.9 189 95.8
Manes.02G149000 Manihot esculenta HOM05D006997 ORTHO05D008713 5.7e-104 380.9 189 96.3
MELO3C003553.2 Cucumis melo HOM05D006997 ORTHO05D008713 7.5e-104 380.6 189 96.3
Dinv07073 Davidia involucrata HOM05D006997 ORTHO05D008713 7.5e-104 380.6 189 96.8
Gorai.002G141200 Gossypium raimondii HOM05D006997 ORTHO05D008713 7.5e-104 380.6 189 95.8
Potri.002G100700 Populus trichocarpa HOM05D006997 ORTHO05D008713 1.3e-103 379.8 189 95.8
GSVIVG01009084001 Vitis vinifera HOM05D006997 ORTHO05D008713 1.3e-103 379.8 189 95.8
Haze_18264 Corylus avellana HOM05D006997 ORTHO05D008713 1.7e-103 379.4 189 96.3
CsaV3_3G047700 Cucumis sativus L. HOM05D006997 ORTHO05D008713 1.7e-103 379.4 189 95.8
QL02p002364 Quercus lobata HOM05D006997 ORTHO05D008713 2.2e-103 379.0 189 95.8
CAN.G857.15 Capsicum annuum HOM05D006997 ORTHO05D008713 2.8e-103 378.6 189 96.3
Duzib116G0677 Durio zibethinus HOM05D006997 ORTHO05D008713 2.8e-103 378.6 189 95.2
CiPaw.15G045900 Carya illinoinensis HOM05D006997 ORTHO05D008713 3.7e-103 378.3 189 95.8
ClCG11G014320 Citrullus lanatus HOM05D006997 ORTHO05D008713 3.7e-103 378.3 189 94.7
Eucgr.F00379 Eucalyptus grandis HOM05D006997 ORTHO05D008713 3.7e-103 378.3 189 95.8
TWI56G0051 Tripterygium wilfordii HOM05D006997 ORTHO05D008713 3.7e-103 378.3 189 95.8
HanXRQChr02g0039281 Helianthus annuus HOM05D006997 ORTHO05D008713 4.8e-103 377.9 189 95.8
Solyc04g074710.3 Solanum lycopersicum HOM05D006997 ORTHO05D008713 4.8e-103 377.9 189 95.8
Sopen04g029680 Solanum pennellii HOM05D006997 ORTHO05D008713 4.8e-103 377.9 189 95.8
PGSC0003DMG400030838 Solanum tuberosum HOM05D006997 ORTHO05D008713 4.8e-103 377.9 189 95.8
Duzib093G0368 Durio zibethinus HOM05D006997 ORTHO05D008713 6.3e-103 377.5 189 95.2
Gohir.A01G132700 Gossypium hirsutum HOM05D006997 ORTHO05D008713 8.2e-103 377.1 189 95.2
Peaxi162Scf00030g02415 Petunia axillaris HOM05D006997 ORTHO05D008713 1.1e-102 376.7 189 95.8
SalBow1G8133 Salvia bowleyana HOM05D006997 ORTHO05D008713 1.1e-102 376.7 189 94.7
Actinidia10345 Actinidia chinensis HOM05D006997 ORTHO05D008713 1.4e-102 376.3 189 95.8
Migut.O00787 Erythranthe guttata HOM05D006997 ORTHO05D008713 1.8e-102 375.9 189 95.2
TAR381G0945 Trochodendron aralioides HOM05D006997 ORTHO05D008713 1.8e-102 375.9 189 94.7
PGR042G3947 Punica granatum HOM05D006997 ORTHO05D008713 3.1e-102 375.2 189 93.1
Nitab4.5_0000786g0050 Nicotiana tabacum HOM05D006997 ORTHO05D008713 4.1e-102 374.8 189 95.2
CANSAT54G2489 Cannabis sativa HOM05D006997 ORTHO05D008713 5.3e-102 374.4 189 95.2
RcHm_v2.0_Chr3g0492071 Rosa chinensis HOM05D006997 ORTHO05D008713 5.3e-102 374.4 189 94.7
Aqoxy5G01920 Aquilegia oxysepala HOM05D006997 ORTHO05D008713 9.1e-102 373.6 189 94.7
ECA247G1028 Erigeron canadensis HOM05D006997 ORTHO05D008713 1.2e-101 373.2 189 94.7
Migut.N02878 Erythranthe guttata HOM05D006997 ORTHO05D008713 1.2e-101 373.2 189 94.2
Ca_20316_v3 Cicer arietinum L. HOM05D006997 ORTHO05D008713 1.6e-101 372.9 189 92.1
Glyma.04G099000 Glycine max HOM05D006997 ORTHO05D008713 1.6e-101 372.9 189 93.7
Nitab4.5_0005108g0030 Nicotiana tabacum HOM05D006997 ORTHO05D008713 2.7e-101 372.1 189 94.7
FvH4_5g36560 Fragaria vesca HOM05D006997 ORTHO05D008713 3.5e-101 371.7 189 93.7
Lj4C96G9 Lonicera japonica HOM05D006997 ORTHO05D008713 3.5e-101 371.7 189 94.2
MBI02_g10710_MAGBIO Magnolia biondii HOM05D006997 ORTHO05D008713 3.5e-101 371.7 189 93.7
Medtr5g099370 Medicago truncatula HOM05D006997 ORTHO05D008713 4.5e-101 371.3 189 91.0
Phvul.009G033100 Phaseolus vulgaris HOM05D006997 ORTHO05D008713 7.7e-101 370.5 189 92.6
FAN08G2563 Fragaria x ananassa HOM05D006997 ORTHO05D008713 1.3e-100 369.8 189 93.1
Glyma.06G100700 Glycine max HOM05D006997 ORTHO05D008713 1.3e-100 369.8 189 93.1
Lj1g0014637 Lotus japonicus HOM05D006997 ORTHO05D008713 1.3e-100 369.8 189 92.6
VMungo1309G1562 Vigna mungo HOM05D006997 ORTHO05D008713 2.2e-100 369.0 189 92.6
Nn5g29994 Nelumbo nucifera HOM05D006997 ORTHO05D008713 3.8e-100 368.2 190 93.7
Actinidia30795 Actinidia chinensis HOM05D006997 ORTHO05D008713 8.5e-100 367.1 190 93.7
MD08G1188600 Malus domestica HOM05D006997 ORTHO05D008713 1.1e-99 366.7 189 92.1
Prupe.1G523100 Prunus persica HOM05D006997 ORTHO05D008713 1.1e-99 366.7 189 91.5
Cc10_g06680 Coffea canephora HOM05D006997 ORTHO05D008713 1.5e-99 366.3 184 94.6
Lalb_Chr08g0242211 Lupinus albus HOM05D006997 ORTHO05D008713 1.9e-99 365.9 190 92.1
Lsat_1_v5_gn_1_3100 Lactuca sativa HOM05D006997 ORTHO05D008713 2.5e-99 365.5 189 92.1
arahy.Tifrunner.gnm1.ann1.50RG73 Arachis hypogaea HOM05D006997 ORTHO05D008713 3.2e-99 365.2 184 93.5
arahy.Tifrunner.gnm1.ann1.M6BDRX Arachis hypogaea HOM05D006997 ORTHO05D008713 3.2e-99 365.2 184 93.5
arahy.Tifrunner.gnm1.ann1.R22A6K Arachis hypogaea HOM05D006997 ORTHO05D008713 3.2e-99 365.2 189 91.5
Sed0013982 Sechium edule HOM05D006997 ORTHO05D008713 5.5e-99 364.4 182 94.5
FAN18G0565 Fragaria x ananassa HOM05D006997 ORTHO05D008713 9.4e-99 363.6 196 89.8
arahy.Tifrunner.gnm1.ann1.2V06JV Arachis hypogaea HOM05D006997 ORTHO05D008713 4.7e-98 361.3 184 92.4
Atru.chr13.1117 Acer truncatum HOM05D006997 ORTHO05D008713 1.0e-97 360.1 202 87.6
FAN13G2131 Fragaria x ananassa HOM05D006997 ORTHO05D008713 1.0e-97 360.1 204 86.3
PSO170G4713 Papaver somniferum HOM05D006997 ORTHO05D008713 1.8e-97 359.4 189 89.4
PSO447G0258 Papaver somniferum HOM05D006997 ORTHO05D008713 1.8e-97 359.4 189 90.5
Rhsim06G0078000 Rhododendron simsii HOM05D006997 ORTHO05D008713 2.3e-97 359.0 202 87.1
arahy.Tifrunner.gnm1.ann1.I3UG1J Arachis hypogaea HOM05D006997 ORTHO05D008713 4.0e-97 358.2 189 90.5
TPR.G18644 Trifolium pratense HOM05D006997 ORTHO05D008713 4.0e-97 358.2 189 89.4
HPP92_005985 Vanilla planifolia HOM05D006997 ORTHO05D008713 4.4e-96 354.8 189 89.4
PSO700G0253 Papaver somniferum HOM05D006997 ORTHO05D008713 1.3e-95 353.2 198 86.4
THA.LOC104806793 Tarenaya hassleriana HOM05D006997 ORTHO05D008713 6.3e-95 350.9 189 86.8
Pp3c2_7910 Physcomitrium patens HOM05D006997 ORTHO05D008713 4.1e-94 348.2 189 86.2
SGA_v2.0_scaffold28G11904 Striga asiatica HOM05D006997 ORTHO05D008713 2.5e-91 339.0 176 92.6
Mapoly0028s0040 Marchantia polymorpha HOM05D006997 ORTHO05D008713 1.2e-88 330.1 189 81.0
Zm00001eb313370 Zea mays HOM05D006997 ORTHO05D008713 9.8e-88 327.0 173 90.2
vmacro21291 Vaccinium macrocarpon HOM05D006997 ORTHO05D008713 6.3e-87 324.3 272 63.2
SMO203G0247 Selaginella moellendorffii HOM05D006997 ORTHO05D008713 7.8e-85 317.4 176 82.4
CSS0033006 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 1.3e-84 316.6 158 95.6
AagrBONN_evm.TU.Sc2ySwM_228.3329 Anthoceros agrestis HOM05D006997 ORTHO05D008713 2.3e-84 315.8 189 76.2
ATR0684G208 Amborella trichopoda HOM05D006997 ORTHO05D008713 1.2e-82 310.1 158 92.4
SHI35102 Sapria himalayana HOM05D006997 ORTHO05D008713 9.8e-80 300.4 185 76.2
arahy.Tifrunner.gnm1.ann1.I4BPU4 Arachis hypogaea HOM05D006997 ORTHO05D008713 1.9e-78 296.2 170 84.1
PRCOL_00000168 Prasinoderma coloniale HOM05D006997 ORTHO05D008713 1.1e-75 287.0 184 73.4
CBR_g19661 Chara braunii HOM05D006997 ORTHO05D008713 1.1e-73 280.4 167 77.8
Hund26989 Selenicereus undatus HOM05D006997 ORTHO05D008713 1.4e-73 280.0 185 76.8
Cre12.g558400 Chlamydomonas reinhardtii HOM05D006997 ORTHO05D008713 8.9e-73 277.3 189 68.3
MD15G1376400 Malus domestica HOM05D006997 ORTHO05D008713 3.0e-68 262.3 180 73.3
MCO01G675 Micromonas commoda HOM05D006997 ORTHO05D008713 8.1e-66 254.2 190 64.2
arahy.Tifrunner.gnm1.ann1.U0EC22 Arachis hypogaea HOM05D006997 ORTHO05D008713 5.2e-65 251.5 189 68.8
Cpa.g.sc36.182 Carica papaya HOM05D006997 ORTHO05D008713 3.0e-60 235.7 184 70.7
Psat2g000280 Pisum sativum HOM05D006997 ORTHO05D008713 1.1e-54 217.2 108 93.5
Os09g0469900 Oryza sativa ssp. japonica HOM05D006997 ORTHO05D008713 9.3e-46 187.6 99 86.9
CSS0036565 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 1.0e-44 184.1 92 96.7
RcHm_v2.0_Chr7g0242241 Rosa chinensis HOM05D006997 ORTHO05D008713 2.8e-42 176.0 92 92.4
MCO07G662 Micromonas commoda HOM05D006997 ORTHO05D008713 2.7e-29 132.9 212 33.0
MCO07G606 Micromonas commoda HOM05D006997 ORTHO05D008713 3.9e-28 129.0 212 32.1
RcHm_v2.0_Chr7g0242231 Rosa chinensis HOM05D006997 ORTHO05D008713 1.1e-27 127.5 67 88.1
CDE10G0159 Ceratophyllum demersum HOM05D006997 ORTHO05D008713 3.1e-25 119.4 136 51.5
DCAR_012882 Daucus carota HOM05D006997 ORTHO05D008713 4.5e-24 115.5 79 75.9
Lj6P222T9 Lonicera japonica HOM05D006997 ORTHO05D008713 5.5e-22 108.6 64 76.6
arahy.Tifrunner.gnm1.ann1.L1DSY1 Arachis hypogaea HOM05D006997 ORTHO05D008713 1.2e-21 107.5 59 81.4
COL.COLO4_12006 Corchorus olitorius HOM05D006997 ORTHO05D008713 1.8e-20 103.6 48 97.9
Gohir.D01G115600 Gossypium hirsutum HOM05D006997 ORTHO05D008713 8.7e-20 101.3 48 93.8
SEGI_11145 Sequoiadendron giganteum HOM05D006997 ORTHO05D008713 2.2e-18 96.7 48 89.6
Lj6P211T7 Lonicera japonica HOM05D006997 ORTHO05D008713 1.2e-16 90.9 67 64.2
arahy.Tifrunner.gnm1.ann1.G6707F Arachis hypogaea HOM05D006997 ORTHO05D008713 2.8e-10 69.7 33 97.0
Phvul.001G070300 Phaseolus vulgaris HOM05D006997 ORTHO05D008713 2.4e-09 66.6 29 93.1
Os10g0141900 Oryza sativa ssp. japonica HOM05D007440 ORTHO05D009418 5.3e-09 65.5 191 26.2
ATR1089G110 Amborella trichopoda HOM05D007440 ORTHO05D009418 3.8e-07 59.3 161 24.8
CiPaw.03G017000 Carya illinoinensis HOM05D007440 ORTHO05D009418 2.5e-06 56.6 189 28.6
Aqoxy6G00075 Aquilegia oxysepala HOM05D007440 ORTHO05D009418 3.2e-06 56.2 146 26.7


User provided reference genes

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