Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029730.1 Olea europaea HOM05D003707 ORTHO05D004309 1.1e-131 473.4 258 100.0
Oeu024817.1 Olea europaea HOM05D003707 ORTHO05D004309 1.2e-69 267.3 198 75.3
SalBow2G0015 Salvia bowleyana HOM05D003707 ORTHO05D004309 1.5e-51 207.2 185 60.5
SalBow2G2952 Salvia bowleyana HOM05D003707 ORTHO05D004309 1.5e-51 207.2 185 60.5
SGA_v2.0_scaffold4G02188 Striga asiatica HOM05D003707 ORTHO05D004309 4.8e-50 202.2 179 60.9
MSTRG.24439 Avicennia marina HOM05D003707 ORTHO05D004309 1.4e-49 200.7 175 61.1
Migut.N02874 Erythranthe guttata HOM05D003707 ORTHO05D004309 2.6e-48 196.4 170 64.1
Hma1.2p1_1180F.1_g264680 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 2.6e-48 196.4 178 60.1
Nitab4.5_0003374g0030 Nicotiana tabacum HOM05D003707 ORTHO05D004309 7.6e-48 194.9 181 59.7
TWI56G1284 Tripterygium wilfordii HOM05D003707 ORTHO05D004309 3.2e-46 189.5 176 60.8
Cc00_g22270 Coffea canephora HOM05D003707 ORTHO05D004309 5.5e-46 188.7 177 58.2
Lj4C96G4 Lonicera japonica HOM05D003707 ORTHO05D004309 5.5e-46 188.7 181 56.9
Sopen04g029730 Solanum pennellii HOM05D003707 ORTHO05D004309 3.5e-45 186.0 173 57.8
Nitab4.5_0009374g0030 Nicotiana tabacum HOM05D003707 ORTHO05D004309 4.6e-45 185.7 181 58.6
QL02p002269 Quercus lobata HOM05D003707 ORTHO05D004309 1.8e-44 183.7 175 55.4
CSS0029872 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 3.0e-44 183.0 180 54.4
Duzib093G2197 Durio zibethinus HOM05D003707 ORTHO05D004309 3.0e-44 183.0 175 56.6
Solyc04g074760.3 Solanum lycopersicum HOM05D003707 ORTHO05D004309 3.0e-44 183.0 173 57.2
PGSC0003DMG400030841 Solanum tuberosum HOM05D003707 ORTHO05D004309 3.0e-44 183.0 175 55.4
Prupe.1G524200 Prunus persica HOM05D003707 ORTHO05D004309 3.9e-44 182.6 180 57.8
Hma1.2p1_1568F.1_g291110 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 5.1e-44 182.2 169 59.8
Thecc.08G101000 Theobroma cacao HOM05D003707 ORTHO05D004309 2.5e-43 179.9 176 55.7
GSVIVG01009092001 Vitis vinifera HOM05D003707 ORTHO05D004309 7.4e-43 178.3 176 54.5
Actinidia10349 Actinidia chinensis HOM05D003707 ORTHO05D004309 1.6e-42 177.2 170 56.5
Atru.chr13.1112 Acer truncatum HOM05D003707 ORTHO05D004309 2.2e-42 176.8 178 55.1
MSTRG.22171 Avicennia marina HOM05D003707 ORTHO05D004309 2.2e-42 176.8 176 56.2
CAN.G1173.6 Capsicum annuum HOM05D003707 ORTHO05D004309 2.2e-42 176.8 175 53.7
Duzib041G0396 Durio zibethinus HOM05D003707 ORTHO05D004309 3.7e-42 176.0 175 56.0
Cfa017898 Carpinus fangiana HOM05D003707 ORTHO05D004309 4.8e-42 175.6 173 56.1
Rhsim06G0077200 Rhododendron simsii HOM05D003707 ORTHO05D004309 2.4e-41 173.3 175 54.3
CiPaw.16G032500 Carya illinoinensis HOM05D003707 ORTHO05D004309 3.1e-41 172.9 175 54.9
COL.COLO4_11998 Corchorus olitorius HOM05D003707 ORTHO05D004309 4.1e-41 172.6 176 52.3
Gorai.010G037300 Gossypium raimondii HOM05D003707 ORTHO05D004309 4.1e-41 172.6 175 54.3
MD08G1190000 Malus domestica HOM05D003707 ORTHO05D004309 6.9e-41 171.8 180 54.4
vmacro11166 Vaccinium macrocarpon HOM05D003707 ORTHO05D004309 6.9e-41 171.8 182 53.3
Gohir.D06G033800 Gossypium hirsutum HOM05D003707 ORTHO05D004309 2.6e-40 169.9 175 53.1
MD15G1377500 Malus domestica HOM05D003707 ORTHO05D004309 3.4e-40 169.5 180 53.9
Ciclev10001810m.g Citrus clementina HOM05D003707 ORTHO05D004309 4.5e-40 169.1 176 55.7
Potri.002G101400 Populus trichocarpa HOM05D003707 ORTHO05D004309 5.9e-40 168.7 175 56.6
Hund16884 Selenicereus undatus HOM05D003707 ORTHO05D004309 7.7e-40 168.3 176 52.3
Gohir.A06G032900 Gossypium hirsutum HOM05D003707 ORTHO05D004309 1.0e-39 167.9 173 53.8
arahy.Tifrunner.gnm1.ann1.NXYL2L Arachis hypogaea HOM05D003707 ORTHO05D004309 1.3e-39 167.5 180 55.0
Eucgr.F00380 Eucalyptus grandis HOM05D003707 ORTHO05D004309 2.2e-39 166.8 172 54.1
arahy.Tifrunner.gnm1.ann1.K5H584 Arachis hypogaea HOM05D003707 ORTHO05D004309 3.8e-39 166.0 180 55.0
Actinidia29599 Actinidia chinensis HOM05D003707 ORTHO05D004309 6.5e-39 165.2 176 52.3
Hma1.2p1_0526F.1_g172810 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 8.5e-39 164.9 180 51.7
AUR62027820 Chenopodium quinoa HOM05D003707 ORTHO05D004309 1.4e-38 164.1 176 51.7
HanXRQChr10g0278171 Helianthus annuus HOM05D003707 ORTHO05D004309 1.9e-38 163.7 171 53.8
Sabra02G0079500 Salix brachista HOM05D003707 ORTHO05D004309 1.9e-38 163.7 177 56.5
HanXRQChr05g0163201 Helianthus annuus HOM05D003707 ORTHO05D004309 2.5e-38 163.3 193 49.2
Lsat_1_v5_gn_6_105560 Lactuca sativa HOM05D003707 ORTHO05D004309 5.5e-38 162.2 182 49.5
Nn4g24800 Nelumbo nucifera HOM05D003707 ORTHO05D004309 7.2e-38 161.8 169 53.8
DCAR_005285 Daucus carota HOM05D003707 ORTHO05D004309 1.2e-37 161.0 165 56.4
ECA246G0538 Erigeron canadensis HOM05D003707 ORTHO05D004309 1.2e-37 161.0 168 54.8
EL10Ac1g01138 Beta vulgaris HOM05D003707 ORTHO05D004309 2.1e-37 160.2 176 52.3
MBI06_g34539_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 1.4e-36 157.5 178 50.6
Manes.18G063100 Manihot esculenta HOM05D003707 ORTHO05D004309 1.8e-36 157.1 180 51.7
FvH4_5g36300 Fragaria vesca HOM05D003707 ORTHO05D004309 3.0e-36 156.4 178 51.7
Lalb_Chr04g0253021 Lupinus albus HOM05D003707 ORTHO05D004309 3.9e-36 156.0 180 54.4
AUR62018979 Chenopodium quinoa HOM05D003707 ORTHO05D004309 6.7e-36 155.2 174 50.0
Lj1g0011682 Lotus japonicus HOM05D003707 ORTHO05D004309 1.1e-35 154.5 168 49.4
Gohir.A05G223200 Gossypium hirsutum HOM05D003707 ORTHO05D004309 1.5e-35 154.1 169 50.3
TWI12G0071 Tripterygium wilfordii HOM05D003707 ORTHO05D004309 1.5e-35 154.1 177 53.1
CiPaw.15G045200 Carya illinoinensis HOM05D003707 ORTHO05D004309 2.0e-35 153.7 180 50.6
PSO063G2842 Papaver somniferum HOM05D003707 ORTHO05D004309 2.5e-35 153.3 174 50.6
Haze_18252 Corylus avellana HOM05D003707 ORTHO05D004309 3.3e-35 152.9 171 53.2
Glyma.06G100100 Glycine max HOM05D003707 ORTHO05D004309 5.7e-35 152.1 182 49.5
RcHm_v2.0_Chr7g0238321 Rosa chinensis HOM05D003707 ORTHO05D004309 1.3e-34 151.0 184 51.6
PSO782G1937 Papaver somniferum HOM05D003707 ORTHO05D004309 4.8e-34 149.1 174 50.0
Dinv07080 Davidia involucrata HOM05D003707 ORTHO05D004309 6.3e-34 148.7 183 49.2
CSS0014867 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 8.2e-34 148.3 179 47.5
Glyma.14G177700 Glycine max HOM05D003707 ORTHO05D004309 1.1e-33 147.9 167 51.5
CSS0001361 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 1.4e-33 147.5 179 47.5
Gohir.D05G225900 Gossypium hirsutum HOM05D003707 ORTHO05D004309 1.4e-33 147.5 169 49.1
Gorai.009G233400 Gossypium raimondii HOM05D003707 ORTHO05D004309 1.8e-33 147.1 169 49.1
Psat5g050280 Pisum sativum HOM05D003707 ORTHO05D004309 2.4e-33 146.7 206 44.2
Peaxi162Scf00139g00014 Petunia axillaris HOM05D003707 ORTHO05D004309 4.1e-33 146.0 173 49.1
FAN04G1986 Fragaria x ananassa HOM05D003707 ORTHO05D004309 5.3e-33 145.6 178 50.0
Ca_16005_v3 Cicer arietinum L. HOM05D003707 ORTHO05D004309 6.9e-33 145.2 175 51.4
PGR031G0663 Punica granatum HOM05D003707 ORTHO05D004309 9.1e-33 144.8 175 49.1
Glyma.02G209600 Glycine max HOM05D003707 ORTHO05D004309 3.4e-32 142.9 163 50.9
unitig_578.g16186 Utricularia gibba HOM05D003707 ORTHO05D004309 5.9e-32 142.1 174 47.1
CsaV3_3G047770 Cucumis sativus L. HOM05D003707 ORTHO05D004309 5.0e-31 139.0 176 45.5
Psat2g069400 Pisum sativum HOM05D003707 ORTHO05D004309 8.5e-31 138.3 170 51.8
Cpa.g.sc36.188 Carica papaya HOM05D003707 ORTHO05D004309 1.1e-30 137.9 175 46.9
Sed0003858 Sechium edule HOM05D003707 ORTHO05D004309 1.1e-30 137.9 176 44.9
THA.LOC104816564 Tarenaya hassleriana HOM05D003707 ORTHO05D004309 1.1e-30 137.9 168 51.8
TPR.G6353 Trifolium pratense HOM05D003707 ORTHO05D004309 4.2e-30 136.0 210 41.0
Aqoxy3G04171 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 1.2e-29 134.4 166 47.6
VMungo0647G1227 Vigna mungo HOM05D003707 ORTHO05D004309 2.7e-29 133.3 203 44.3
Medtr3g099600 Medicago truncatula HOM05D003707 ORTHO05D004309 3.6e-29 132.9 203 42.4
PGR031G2053 Punica granatum HOM05D003707 ORTHO05D004309 4.7e-29 132.5 165 49.7
VMungo1309G1468 Vigna mungo HOM05D003707 ORTHO05D004309 7.9e-29 131.7 166 47.0
Aa31LG9G14730 Aethionema arabicum HOM05D003707 ORTHO05D004309 1.0e-28 131.3 171 48.0
ECA247G2086 Erigeron canadensis HOM05D003707 ORTHO05D004309 2.3e-28 130.2 170 51.8
AL6G41440 Arabidopsis lyrata HOM05D003707 ORTHO05D004309 6.7e-28 128.6 173 46.2
Sc23g0000420 Simmondsia chinensis HOM05D003707 ORTHO05D004309 1.5e-27 127.5 192 43.2
TPR.G12497 Trifolium pratense HOM05D003707 ORTHO05D004309 1.5e-27 127.5 180 48.3
Sed0001081 Sechium edule HOM05D003707 ORTHO05D004309 2.0e-27 127.1 177 43.5
MELO3C003545.2 Cucumis melo HOM05D003707 ORTHO05D004309 9.7e-27 124.8 176 42.0
AT4G09060 Arabidopsis thaliana HOM05D003707 ORTHO05D004309 1.7e-26 124.0 172 45.3
Actinidia33120 Actinidia chinensis HOM05D003707 ORTHO05D004309 2.2e-26 123.6 166 44.0
Phvul.009G033700 Phaseolus vulgaris HOM05D003707 ORTHO05D004309 2.4e-25 120.2 161 47.2
Carub.0006s2764 Capsella rubella HOM05D003707 ORTHO05D004309 3.1e-25 119.8 174 45.4
unitig_8.g4846 Utricularia gibba HOM05D003707 ORTHO05D004309 3.1e-25 119.8 108 53.7
Phvul.008G177200 Phaseolus vulgaris HOM05D003707 ORTHO05D004309 4.1e-25 119.4 161 47.2
RcHm_v2.0_Chr3g0481861 Rosa chinensis HOM05D003707 ORTHO05D004309 4.1e-25 119.4 134 54.5
Lalb_Chr11g0065241 Lupinus albus HOM05D003707 ORTHO05D004309 7.0e-25 118.6 141 50.4
Ca_16033_v3 Cicer arietinum L. HOM05D003707 ORTHO05D004309 2.0e-24 117.1 219 37.4
MD08G1189700 Malus domestica HOM05D003707 ORTHO05D004309 2.6e-24 116.7 109 55.0
RcHm_v2.0_Chr5g0045611 Rosa chinensis HOM05D003707 ORTHO05D004309 7.7e-24 115.2 135 53.3
FAN13G1833 Fragaria x ananassa HOM05D003707 ORTHO05D004309 2.9e-23 113.2 132 47.7
FAN18G3842 Fragaria x ananassa HOM05D003707 ORTHO05D004309 3.8e-23 112.8 128 48.4
BraA03t12047Z Brassica rapa HOM05D003707 ORTHO05D004309 1.5e-22 110.9 166 42.8
CARHR260110 Cardamine hirsuta HOM05D003707 ORTHO05D004309 3.2e-22 109.8 159 44.7
BcaC01g04732 Brassica carinata HOM05D003707 ORTHO05D004309 4.2e-22 109.4 175 40.6
C03p34360 Brassica napus HOM05D003707 ORTHO05D004309 4.2e-22 109.4 165 42.4
BolC3t15746H Brassica oleracea HOM05D003707 ORTHO05D004309 4.2e-22 109.4 165 42.4
Glyma.04G098500 Glycine max HOM05D003707 ORTHO05D004309 9.4e-22 108.2 137 47.4
A03p28420 Brassica napus HOM05D003707 ORTHO05D004309 1.6e-21 107.5 167 41.3
AL1G26650 Arabidopsis lyrata HOM05D003707 ORTHO05D004309 2.7e-21 106.7 142 45.1
Sp6g08460 Schrenkiella parvula HOM05D003707 ORTHO05D004309 6.1e-21 105.5 167 41.3
Thhalv10008342m.g Eutrema salsugineum HOM05D003707 ORTHO05D004309 1.4e-20 104.4 145 43.4
AT1G14680 Arabidopsis thaliana HOM05D003707 ORTHO05D004309 1.8e-20 104.0 143 44.1
Duzib116G0740 Durio zibethinus HOM05D003707 ORTHO05D004309 1.8e-20 104.0 105 54.3
Carub.0001s1444 Capsella rubella HOM05D003707 ORTHO05D004309 2.3e-20 103.6 143 44.1
Hund26994 Selenicereus undatus HOM05D003707 ORTHO05D004309 2.3e-20 103.6 128 43.0
BcaB01g02805 Brassica carinata HOM05D003707 ORTHO05D004309 3.0e-20 103.2 191 39.3
Sp1g13060 Schrenkiella parvula HOM05D003707 ORTHO05D004309 4.0e-20 102.8 140 42.9
ClCG11G014370 Citrullus lanatus HOM05D003707 ORTHO05D004309 6.7e-20 102.1 173 41.6
CARHR015180 Cardamine hirsuta HOM05D003707 ORTHO05D004309 1.7e-18 97.4 144 41.7
BcaB01g01380 Brassica carinata HOM05D003707 ORTHO05D004309 6.3e-18 95.5 212 35.8
CANSAT25G0959 Cannabis sativa HOM05D003707 ORTHO05D004309 2.7e-16 90.1 158 37.3
Medtr5g064800 Medicago truncatula HOM05D009584 ORTHO05D011650 1.7e-15 87.4 144 43.1
HPP92_025845 Vanilla planifolia HOM05D003707 ORTHO05D004309 1.7e-15 87.4 142 42.3
CDE05G1426 Ceratophyllum demersum HOM05D003707 ORTHO05D004309 1.5e-14 84.3 111 41.4
Thhalv10028816m.g Eutrema salsugineum HOM05D003707 ORTHO05D004309 1.5e-14 84.3 128 42.2
Os02g0831400 Oryza sativa ssp. japonica HOM05D003707 ORTHO05D004309 4.7e-13 79.3 114 44.7
A06p10740 Brassica napus HOM05D003707 ORTHO05D004309 2.3e-12 77.0 123 41.5
BraA06t24253Z Brassica rapa HOM05D003707 ORTHO05D004309 2.3e-12 77.0 123 41.5
MBI03_g47917_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 6.8e-12 75.5 151 35.1
ATR0618G286 Amborella trichopoda HOM05D003707 ORTHO05D004309 3.4e-11 73.2 91 42.9
RcHm_v2.0_Chr5g0040961 Rosa chinensis HOM05D003707 ORTHO05D004309 3.4e-11 73.2 83 49.4
BcaB02g06540 Brassica carinata HOM05D003707 ORTHO05D004309 1.3e-10 71.2 122 40.2
C05p12640 Brassica napus HOM05D003707 ORTHO05D004309 1.3e-10 71.2 122 39.3
BolC5t30008H Brassica oleracea HOM05D000624 ORTHO05D000495 1.3e-10 71.2 122 39.3
BcaC05g25387 Brassica carinata HOM05D003707 ORTHO05D004309 1.7e-10 70.9 131 38.2
A09p29580 Brassica napus HOM05D003707 ORTHO05D004309 1.7e-10 70.9 178 32.6
BraA09t38526Z Brassica rapa HOM05D003707 ORTHO05D004309 1.7e-10 70.9 178 32.6
C09p37650 Brassica napus HOM05D003707 ORTHO05D004309 2.2e-10 70.5 116 39.7
BolC9t56595H Brassica oleracea HOM05D003707 ORTHO05D004309 2.2e-10 70.5 116 39.7
MBI03_g38469_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 4.5e-08 62.8 158 30.4
BcaC04g20946 Brassica carinata HOM05D003707 ORTHO05D004309 7.7e-08 62.0 96 40.6
MD08G1190200 Malus domestica HOM05D003707 ORTHO05D004309 5.0e-07 59.3 66 53.0


User provided reference genes

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