Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029729.1 Olea europaea HOM05D003707 ORTHO05D004309 5.8e-86 320.9 162 100.0
Oeu024817.1 Olea europaea HOM05D003707 ORTHO05D004309 5.3e-71 271.2 156 87.2
CAN.G1173.6 Capsicum annuum HOM05D003707 ORTHO05D004309 5.3e-55 218.0 155 69.7
Sopen04g029730 Solanum pennellii HOM05D003707 ORTHO05D004309 5.9e-54 214.5 155 68.4
Nitab4.5_0009374g0030 Nicotiana tabacum HOM05D003707 ORTHO05D004309 1.7e-53 213.0 155 69.7
Migut.N02874 Erythranthe guttata HOM05D003707 ORTHO05D004309 2.2e-53 212.6 155 69.0
Nitab4.5_0003374g0030 Nicotiana tabacum HOM05D003707 ORTHO05D004309 3.8e-53 211.8 155 69.7
Duzib093G2197 Durio zibethinus HOM05D003707 ORTHO05D004309 3.2e-52 208.8 154 68.2
Duzib041G0396 Durio zibethinus HOM05D003707 ORTHO05D004309 4.2e-52 208.4 154 66.9
Solyc04g074760.3 Solanum lycopersicum HOM05D003707 ORTHO05D004309 7.2e-52 207.6 155 66.5
Gohir.A06G032900 Gossypium hirsutum HOM05D003707 ORTHO05D004309 1.0e-50 203.8 154 66.2
Hma1.2p1_1180F.1_g264680 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 1.0e-50 203.8 154 66.9
Cfa017898 Carpinus fangiana HOM05D003707 ORTHO05D004309 1.3e-50 203.4 148 68.2
Gohir.D05G225900 Gossypium hirsutum HOM05D003707 ORTHO05D004309 3.0e-50 202.2 154 64.9
Gorai.009G233400 Gossypium raimondii HOM05D003707 ORTHO05D004309 3.0e-50 202.2 154 64.9
Gohir.A05G223200 Gossypium hirsutum HOM05D003707 ORTHO05D004309 6.7e-50 201.1 154 64.9
MSTRG.22171 Avicennia marina HOM05D003707 ORTHO05D004309 1.5e-49 199.9 156 65.4
Haze_18252 Corylus avellana HOM05D003707 ORTHO05D004309 1.9e-49 199.5 148 67.6
TWI12G0071 Tripterygium wilfordii HOM05D003707 ORTHO05D004309 1.9e-49 199.5 154 66.9
Lj4C96G4 Lonicera japonica HOM05D003707 ORTHO05D004309 2.5e-49 199.1 152 65.8
CSS0029872 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 2.8e-48 195.7 152 66.4
Hma1.2p1_1568F.1_g291110 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 3.7e-48 195.3 154 63.6
PGSC0003DMG400030841 Solanum tuberosum HOM05D003707 ORTHO05D004309 3.1e-47 192.2 155 63.2
Rhsim06G0077200 Rhododendron simsii HOM05D003707 ORTHO05D004309 4.1e-47 191.8 154 64.3
TWI56G1284 Tripterygium wilfordii HOM05D003707 ORTHO05D004309 3.4e-46 188.7 148 66.2
vmacro11166 Vaccinium macrocarpon HOM05D003707 ORTHO05D004309 2.9e-45 185.7 142 68.3
Cpa.g.sc36.188 Carica papaya HOM05D003707 ORTHO05D004309 8.5e-45 184.1 148 63.5
SalBow2G0015 Salvia bowleyana HOM05D003707 ORTHO05D004309 2.5e-44 182.6 150 64.7
SalBow2G2952 Salvia bowleyana HOM05D003707 ORTHO05D004309 2.5e-44 182.6 150 64.7
Thecc.08G101000 Theobroma cacao HOM05D003707 ORTHO05D004309 3.2e-44 182.2 154 61.0
unitig_578.g16186 Utricularia gibba HOM05D003707 ORTHO05D004309 7.2e-44 181.0 152 62.5
Manes.18G063100 Manihot esculenta HOM05D003707 ORTHO05D004309 2.1e-43 179.5 152 60.5
Lsat_1_v5_gn_6_105560 Lactuca sativa HOM05D003707 ORTHO05D004309 3.6e-43 178.7 156 59.6
GSVIVG01009092001 Vitis vinifera HOM05D003707 ORTHO05D004309 3.6e-43 178.7 123 73.2
HanXRQChr05g0163201 Helianthus annuus HOM05D003707 ORTHO05D004309 4.6e-43 178.3 156 59.0
CiPaw.15G045200 Carya illinoinensis HOM05D003707 ORTHO05D004309 6.1e-43 177.9 141 63.8
ECA246G0538 Erigeron canadensis HOM05D003707 ORTHO05D004309 6.1e-43 177.9 154 62.3
PSO782G1937 Papaver somniferum HOM05D003707 ORTHO05D004309 6.1e-43 177.9 156 60.3
THA.LOC104816564 Tarenaya hassleriana HOM05D003707 ORTHO05D004309 7.9e-43 177.6 152 61.8
Thhalv10028816m.g Eutrema salsugineum HOM05D003707 ORTHO05D004309 1.4e-42 176.8 148 60.8
Gohir.D06G033800 Gossypium hirsutum HOM05D003707 ORTHO05D004309 1.4e-42 176.8 127 68.5
Gorai.010G037300 Gossypium raimondii HOM05D003707 ORTHO05D004309 1.4e-42 176.8 127 68.5
QL02p002269 Quercus lobata HOM05D003707 ORTHO05D004309 3.9e-42 175.3 152 59.9
unitig_8.g4846 Utricularia gibba HOM05D003707 ORTHO05D004309 6.7e-42 174.5 152 61.8
PGR031G2053 Punica granatum HOM05D003707 ORTHO05D004309 8.8e-42 174.1 148 61.5
Sed0001081 Sechium edule HOM05D003707 ORTHO05D004309 1.5e-41 173.3 152 59.9
EL10Ac1g01138 Beta vulgaris HOM05D003707 ORTHO05D004309 4.3e-41 171.8 152 57.9
Duzib114G0708 Durio zibethinus HOM05D003707 ORTHO05D004309 4.3e-41 171.8 152 60.5
FAN04G1986 Fragaria x ananassa HOM05D003707 ORTHO05D004309 9.7e-41 170.6 125 68.0
Prupe.1G524200 Prunus persica HOM05D003707 ORTHO05D004309 9.7e-41 170.6 123 66.7
Cc00_g22270 Coffea canephora HOM05D003707 ORTHO05D004309 1.3e-40 170.2 156 55.8
BcaB02g06540 Brassica carinata HOM05D003707 ORTHO05D004309 1.7e-40 169.9 155 52.9
FAN13G1833 Fragaria x ananassa HOM05D003707 ORTHO05D004309 2.2e-40 169.5 125 67.2
MD15G1377500 Malus domestica HOM05D003707 ORTHO05D004309 3.7e-40 168.7 123 66.7
FAN18G3842 Fragaria x ananassa HOM05D003707 ORTHO05D004309 6.3e-40 167.9 125 66.4
Potri.002G101400 Populus trichocarpa HOM05D003707 ORTHO05D004309 6.3e-40 167.9 158 56.3
CiPaw.16G032500 Carya illinoinensis HOM05D003707 ORTHO05D004309 8.2e-40 167.5 148 61.5
RcHm_v2.0_Chr3g0481851 Rosa chinensis HOM05D003707 ORTHO05D004309 8.2e-40 167.5 145 60.0
FvH4_5g36300 Fragaria vesca HOM05D003707 ORTHO05D004309 1.8e-39 166.4 123 66.7
MD08G1190000 Malus domestica HOM05D003707 ORTHO05D004309 1.8e-39 166.4 152 55.9
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 2.4e-39 166.0 141 60.3
BcaB01g02805 Brassica carinata HOM05D003707 ORTHO05D004309 3.1e-39 165.6 150 57.3
PSO063G2842 Papaver somniferum HOM05D003707 ORTHO05D004309 3.1e-39 165.6 156 57.7
Sabra02G0079500 Salix brachista HOM05D003707 ORTHO05D004309 6.9e-39 164.5 165 53.9
Glyma.06G100100 Glycine max HOM05D003707 ORTHO05D004309 1.2e-38 163.7 148 56.1
Sed0003858 Sechium edule HOM05D003707 ORTHO05D004309 2.6e-38 162.5 123 66.7
ClCG11G014370 Citrullus lanatus HOM05D003707 ORTHO05D004309 3.4e-38 162.2 123 65.0
CARHR260110 Cardamine hirsuta HOM05D003707 ORTHO05D004309 4.5e-38 161.8 148 54.7
Sp6g08460 Schrenkiella parvula HOM05D003707 ORTHO05D004309 4.5e-38 161.8 123 64.2
MELO3C003545.2 Cucumis melo HOM05D003707 ORTHO05D004309 7.7e-38 161.0 123 65.0
Aa31LG9G14730 Aethionema arabicum HOM05D003707 ORTHO05D004309 1.7e-37 159.8 152 54.6
RcHm_v2.0_Chr7g0238321 Rosa chinensis HOM05D003707 ORTHO05D004309 1.7e-37 159.8 120 65.8
A09p29580 Brassica napus HOM05D003707 ORTHO05D004309 2.9e-37 159.1 139 60.4
BraA09t38526Z Brassica rapa HOM05D003707 ORTHO05D004309 2.9e-37 159.1 139 60.4
Actinidia29599 Actinidia chinensis HOM05D003707 ORTHO05D004309 5.0e-37 158.3 148 58.1
CsaV3_3G047770 Cucumis sativus L. HOM05D003707 ORTHO05D004309 5.0e-37 158.3 123 63.4
Peaxi162Scf00139g00014 Petunia axillaris HOM05D003707 ORTHO05D004309 8.5e-37 157.5 162 54.9
C05p12640 Brassica napus HOM05D003707 ORTHO05D004309 3.2e-36 155.6 123 61.0
Glyma.02G209600 Glycine max HOM05D003707 ORTHO05D004309 7.2e-36 154.5 148 56.1
BraA06t24253Z Brassica rapa HOM05D003707 ORTHO05D004309 1.6e-35 153.3 123 61.0
DCAR_005285 Daucus carota HOM05D003707 ORTHO05D004309 2.1e-35 152.9 123 60.2
Dinv07080 Davidia involucrata HOM05D003707 ORTHO05D004309 2.7e-35 152.5 154 54.5
Glyma.14G177700 Glycine max HOM05D003707 ORTHO05D004309 3.6e-35 152.1 123 62.6
Lalb_Chr11g0065241 Lupinus albus HOM05D003707 ORTHO05D004309 3.6e-35 152.1 145 57.2
A06p10740 Brassica napus HOM05D003707 ORTHO05D004309 6.1e-35 151.4 123 60.2
Carub.0001s1444 Capsella rubella HOM05D003707 ORTHO05D004309 7.9e-35 151.0 125 62.4
Sp1g13060 Schrenkiella parvula HOM05D003707 ORTHO05D004309 1.0e-34 150.6 142 57.0
SGA_v2.0_scaffold4G02188 Striga asiatica HOM05D003707 ORTHO05D004309 1.0e-34 150.6 154 55.2
HanXRQChr17g0556331 Helianthus annuus HOM05D003707 ORTHO05D004309 1.8e-34 149.8 148 54.7
Glyma.04G098500 Glycine max HOM05D003707 ORTHO05D004309 2.3e-34 149.4 148 52.0
AT1G14680 Arabidopsis thaliana HOM05D003707 ORTHO05D004309 3.0e-34 149.1 123 60.2
TPR.G12497 Trifolium pratense HOM05D003707 ORTHO05D004309 3.9e-34 148.7 150 52.0
arahy.Tifrunner.gnm1.ann1.K5H584 Arachis hypogaea HOM05D003707 ORTHO05D004309 1.5e-33 146.7 148 53.4
ECA247G2086 Erigeron canadensis HOM05D003707 ORTHO05D004309 1.5e-33 146.7 161 49.7
Thhalv10008342m.g Eutrema salsugineum HOM05D003707 ORTHO05D004309 2.0e-33 146.4 123 61.0
arahy.Tifrunner.gnm1.ann1.NXYL2L Arachis hypogaea HOM05D003707 ORTHO05D004309 2.6e-33 146.0 148 53.4
HanXRQChr10g0278171 Helianthus annuus HOM05D003707 ORTHO05D004309 5.7e-33 144.8 156 51.3
Actinidia10349 Actinidia chinensis HOM05D003707 ORTHO05D004309 7.4e-33 144.4 156 52.6
Atru.chr13.1112 Acer truncatum HOM05D003707 ORTHO05D004309 1.3e-32 143.7 148 54.1
CDE02G0255 Ceratophyllum demersum HOM05D003707 ORTHO05D004309 1.7e-32 143.3 149 49.0
MBI06_g46882_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 3.7e-32 142.1 155 49.0
MBI06_g47948_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 4.8e-32 141.7 155 49.0
Psat2g069400 Pisum sativum HOM05D003707 ORTHO05D004309 6.3e-32 141.4 154 48.1
Ca_16005_v3 Cicer arietinum L. HOM05D003707 ORTHO05D004309 1.1e-31 140.6 154 48.7
RcHm_v2.0_Chr5g0049351 Rosa chinensis HOM05D003707 ORTHO05D004309 1.4e-31 140.2 151 54.3
Phvul.009G033700 Phaseolus vulgaris HOM05D003707 ORTHO05D004309 4.1e-31 138.7 148 50.7
BraA03t12047Z Brassica rapa HOM05D003707 ORTHO05D004309 9.1e-31 137.5 150 51.3
CSS0001361 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 1.6e-30 136.7 156 50.0
CSS0014867 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 1.6e-30 136.7 156 50.0
Ciclev10001810m.g Citrus clementina HOM05D003707 ORTHO05D004309 1.6e-30 136.7 152 52.0
BcaC05g25387 Brassica carinata HOM05D003707 ORTHO05D004309 2.0e-30 136.3 123 56.9
CARHR015180 Cardamine hirsuta HOM05D003707 ORTHO05D004309 3.5e-30 135.6 123 57.7
VMungo1309G1468 Vigna mungo HOM05D003707 ORTHO05D004309 5.9e-30 134.8 171 43.3
Phvul.008G177200 Phaseolus vulgaris HOM05D003707 ORTHO05D004309 1.0e-29 134.0 148 52.7
AL6G41440 Arabidopsis lyrata HOM05D003707 ORTHO05D004309 1.3e-29 133.7 144 49.3
RcHm_v2.0_Chr7g0238301 Rosa chinensis HOM05D003707 ORTHO05D004309 2.9e-29 132.5 130 56.2
VMungo0647G1227 Vigna mungo HOM05D003707 ORTHO05D004309 2.9e-29 132.5 148 50.7
Nn4g24800 Nelumbo nucifera HOM05D003707 ORTHO05D004309 1.9e-28 129.8 120 59.2
MSTRG.24439 Avicennia marina HOM05D003707 ORTHO05D004309 2.5e-28 129.4 93 71.0
Carub.0006s2764 Capsella rubella HOM05D003707 ORTHO05D004309 2.5e-28 129.4 119 56.3
AL1G26650 Arabidopsis lyrata HOM05D003707 ORTHO05D004309 3.2e-28 129.0 122 55.7
AT4G09060 Arabidopsis thaliana HOM05D003707 ORTHO05D004309 4.2e-28 128.6 119 56.3
Eucgr.F00380 Eucalyptus grandis HOM05D003707 ORTHO05D004309 5.5e-28 128.3 123 53.7
Hund16884 Selenicereus undatus HOM05D003707 ORTHO05D004309 2.1e-27 126.3 152 46.7
BcaB01g01380 Brassica carinata HOM05D003707 ORTHO05D004309 2.7e-27 125.9 144 52.1
MBI03_g38469_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 6.1e-27 124.8 157 43.9
PGR031G0663 Punica granatum HOM05D003707 ORTHO05D004309 1.1e-25 120.6 122 55.7
C03p34360 Brassica napus HOM05D003707 ORTHO05D004309 2.0e-25 119.8 123 52.8
BolC3t15746H Brassica oleracea HOM05D003707 ORTHO05D004309 2.0e-25 119.8 123 52.8
BcaC01g04732 Brassica carinata HOM05D003707 ORTHO05D004309 2.6e-25 119.4 123 52.8
A03p28420 Brassica napus HOM05D003707 ORTHO05D004309 5.7e-25 118.2 123 52.0
Lj1g0011682 Lotus japonicus HOM05D003707 ORTHO05D004309 1.3e-24 117.1 148 43.2
Lalb_Chr04g0253021 Lupinus albus HOM05D003707 ORTHO05D004309 3.7e-24 115.5 123 50.4
Hund26994 Selenicereus undatus HOM05D003707 ORTHO05D004309 4.8e-24 115.2 152 45.4
MD08G1190200 Malus domestica HOM05D003707 ORTHO05D004309 4.1e-23 112.1 89 59.6
Aqoxy3G04171 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 5.3e-23 111.7 92 62.0
EL10Ac4g09478 Beta vulgaris HOM05D029458 ORTHO05D004309 2.2e-21 106.3 79 65.8
ATR0618G286 Amborella trichopoda HOM05D003707 ORTHO05D004309 1.5e-20 103.6 145 42.8
MD08G1189700 Malus domestica HOM05D003707 ORTHO05D004309 2.5e-20 102.8 62 74.2
RcHm_v2.0_Chr5g0045621 Rosa chinensis HOM05D003707 ORTHO05D004309 3.2e-20 102.4 151 43.7
C08p45530 Brassica napus HOM05D000624 ORTHO05D000495 4.2e-20 102.1 138 44.2
BolC8t52105H Brassica oleracea HOM05D000624 ORTHO05D000495 4.2e-20 102.1 138 44.2
BcaC07g41551 Brassica carinata HOM05D003707 ORTHO05D032288 5.5e-20 101.7 138 43.5
Cpa.g.sc36.189 Carica papaya HOM05D003707 ORTHO05D004309 1.2e-19 100.5 148 43.9
Medtr3g099600 Medicago truncatula HOM05D003707 ORTHO05D004309 1.6e-19 100.1 120 47.5
Ca_16033_v3 Cicer arietinum L. HOM05D003707 ORTHO05D004309 6.1e-19 98.2 120 45.0
TPR.G6353 Trifolium pratense HOM05D003707 ORTHO05D004309 8.0e-19 97.8 120 46.7
HPP92_025845 Vanilla planifolia HOM05D003707 ORTHO05D004309 1.8e-18 96.7 133 41.4
CANSAT25G0959 Cannabis sativa HOM05D003707 ORTHO05D004309 6.8e-18 94.7 146 41.8
BolC5t30008H Brassica oleracea HOM05D000624 ORTHO05D000495 5.7e-17 91.7 60 71.7
ClCG08G011330 Citrullus lanatus HOM05D003707 ORTHO05D004309 8.3e-16 87.8 148 40.5
MBI03_g47917_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 1.4e-15 87.0 157 35.0
Haze_21792 Corylus avellana HOM05D003707 ORTHO05D004309 7.0e-15 84.7 84 56.0
Psat5g050280 Pisum sativum HOM05D003707 ORTHO05D004309 9.1e-15 84.3 97 46.4
Hma1.2p1_0526F.1_g172800 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 1.2e-14 84.0 46 80.4
COL.COLO4_11998 Corchorus olitorius HOM05D003707 ORTHO05D004309 9.5e-12 74.3 170 32.9
Zm00001eb259540 Zea mays HOM05D003707 ORTHO05D004309 3.6e-11 72.4 163 33.1
BcaB02g06537 Brassica carinata HOM05D003707 ORTHO05D004309 2.6e-09 66.2 53 58.5
RcHm_v2.0_Chr5g0044811 Rosa chinensis HOM05D003707 ORTHO05D004309 4.4e-09 65.5 58 58.6
BraA09t41558Z Brassica rapa HOM05D065654 ORTHO05D032288 9.2e-07 57.8 127 37.0
AUR62027820 Chenopodium quinoa HOM05D003707 ORTHO05D004309 9.2e-07 57.8 84 40.5
A09p61960 Brassica napus HOM05D065654 ORTHO05D032288 1.6e-06 57.0 127 36.2
MBI12_g20562_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 4.5e-06 55.5 50 56.0
AUR62018979 Chenopodium quinoa HOM05D003707 ORTHO05D004309 5.9e-06 55.1 84 39.3


User provided reference genes

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