Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029662.1 Olea europaea HOM05D009091 ORTHO05D003768 4.9e-85 317.8 162 100.0
RcHm_v2.0_Chr4g0433611 Rosa chinensis HOM05D009091 ORTHO05D003768 1.6e-30 136.7 162 46.9
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.0e-21 107.5 156 41.0
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 1.0e-21 107.5 146 41.1
FAN08G3223 Fragaria x ananassa HOM05D009091 ORTHO05D003768 2.2e-21 106.3 147 43.5
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.5e-20 103.6 162 41.4
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 3.2e-20 102.4 142 43.0
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 1.0e-18 97.4 139 37.4
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 8.8e-18 94.4 139 36.7
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-17 94.0 155 40.0
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 1.2e-17 94.0 154 39.6
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 4.4e-17 92.0 164 38.4
RcHm_v2.0_Chr4g0420561 Rosa chinensis HOM05D009091 ORTHO05D003768 7.5e-17 91.3 134 41.8
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 2.2e-16 89.7 50 86.0
RcHm_v2.0_Chr3g0496631 Rosa chinensis HOM05D009091 ORTHO05D003768 2.8e-16 89.4 95 48.4
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 3.7e-16 89.0 148 39.2
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 4.8e-16 88.6 133 42.9
RcHm_v2.0_Chr7g0231331 Rosa chinensis HOM05D009091 ORTHO05D003768 4.8e-16 88.6 127 41.7
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 7.0e-15 84.7 163 33.7
Oeu050751.1 Olea europaea HOM05D009091 ORTHO05D003768 2.7e-14 82.8 123 39.8
Oeu016711.1 Olea europaea HOM05D023826 ORTHO05D003768 3.5e-14 82.4 132 39.4
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.3e-13 80.5 136 39.0
Oeu048290.1 Olea europaea HOM05D009091 ORTHO05D003768 1.3e-13 80.5 129 36.4
FAN22G1616 Fragaria x ananassa HOM05D009091 ORTHO05D003768 2.9e-13 79.3 144 40.3
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 5.0e-13 78.6 158 34.2
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 6.5e-13 78.2 149 37.6
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.5e-12 76.3 108 42.6
PSO339G2856 Papaver somniferum HOM05D008526 ORTHO05D010380 4.2e-12 75.5 146 34.2
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 3.6e-11 72.4 131 30.5
CSS0021689 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 8.0e-11 71.2 148 35.8
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.0e-10 70.9 120 33.3
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.0e-10 70.9 132 36.4
PSO339G6242 Papaver somniferum HOM05D008526 ORTHO05D010380 1.8e-10 70.1 141 34.0
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 2.3e-10 69.7 92 39.1
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 3.0e-10 69.3 93 38.7
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 2.0e-09 66.6 136 30.9
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.0e-09 66.6 132 32.6
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.6e-09 66.2 132 31.1
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.6e-09 66.2 130 34.6
Atru.chr9.1118 Acer truncatum HOM05D007314 ORTHO05D003768 3.4e-09 65.9 88 39.8
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.4e-09 65.9 130 33.8
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 4.4e-09 65.5 140 34.3
Rhsim05G0198600 Rhododendron simsii HOM05D000030 ORTHO05D003768 7.5e-09 64.7 135 34.1
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.7e-08 63.5 132 30.3
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.7e-08 63.5 131 32.1
FvH4_5g18423 Fragaria vesca HOM05D009091 ORTHO05D000062 2.2e-08 63.2 147 35.4
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.2e-08 63.2 130 33.8
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 2.8e-08 62.8 139 32.4
Sed0001469 Sechium edule HOM05D007314 ORTHO05D003768 4.9e-08 62.0 92 34.8
Sed0011465 Sechium edule HOM05D007314 ORTHO05D003768 4.9e-08 62.0 92 34.8
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 6.3e-08 61.6 148 31.1
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 8.3e-08 61.2 152 29.6
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-07 60.8 121 33.9
TAR633G2694 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-07 60.5 130 33.1
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.4e-07 59.7 155 27.1
BolC4t24885H Brassica oleracea HOM05D031530 ORTHO05D023934 3.1e-07 59.3 92 32.6
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.1e-07 59.3 132 32.6
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.1e-07 59.3 132 32.6
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.1e-07 59.3 132 32.6
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 3.1e-07 59.3 134 30.6
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 3.1e-07 59.3 133 30.8
TWI53G0470 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.1e-07 59.3 130 33.8
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.1e-07 58.9 132 32.6
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.1e-07 58.9 125 33.6
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.1e-07 58.9 125 33.6
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.4e-07 58.5 145 31.0
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 7.0e-07 58.2 153 28.8
RcHm_v2.0_Chr1g0357501 Rosa chinensis HOM05D009091 ORTHO05D003768 7.0e-07 58.2 86 40.7
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 9.2e-07 57.8 130 30.0
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 9.2e-07 57.8 133 30.8
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 9.2e-07 57.8 141 28.4
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.2e-06 57.4 138 29.7
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.0e-06 56.6 132 30.3
MBI15_g19197_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.7e-06 56.2 135 28.9
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 2.7e-06 56.2 135 28.9
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 2.7e-06 56.2 131 29.0
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 4.5e-06 55.5 135 32.6
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 5.9e-06 55.1 129 28.7
Aqoxy1G02807 Aquilegia oxysepala HOM05D008321 ORTHO05D003768 5.9e-06 55.1 129 31.8
A09p31580 Brassica napus HOM05D008309 ORTHO05D010308 7.7e-06 54.7 132 33.3
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 7.7e-06 54.7 132 33.3
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 7.7e-06 54.7 119 30.3


User provided reference genes

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