Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029553.1 Olea europaea HOM05D004225 ORTHO05D004728 4.0e-188 661.4 361 100.0
MSTRG.5924 Avicennia marina HOM05D004225 ORTHO05D004728 1.0e-82 311.2 362 52.5
Rhsim03G0054800 Rhododendron simsii HOM05D004225 ORTHO05D004728 4.8e-80 302.4 363 50.7
vmacro07548 Vaccinium macrocarpon HOM05D004225 ORTHO05D004728 5.8e-78 295.4 363 49.9
Dinv25097 Davidia involucrata HOM05D004225 ORTHO05D004728 4.2e-76 289.3 365 48.2
SalBow3G0054 Salvia bowleyana HOM05D004225 ORTHO05D004728 4.2e-76 289.3 367 49.9
Cfa017675 Carpinus fangiana HOM05D004225 ORTHO05D004728 4.6e-75 285.8 364 48.6
Thecc.05G246800 Theobroma cacao HOM05D004225 ORTHO05D004728 4.6e-75 285.8 367 48.8
GSVIVG01022462001 Vitis vinifera HOM05D004225 ORTHO05D004728 7.9e-75 285.0 367 49.3
Duzib128G0769 Durio zibethinus HOM05D004225 ORTHO05D004728 1.0e-74 284.6 369 49.1
Actinidia37791 Actinidia chinensis HOM05D004225 ORTHO05D004728 2.3e-74 283.5 367 47.7
Haze_20474 Corylus avellana HOM05D004225 ORTHO05D004728 3.9e-74 282.7 364 48.9
CiPaw.10G126100 Carya illinoinensis HOM05D004225 ORTHO05D004728 1.1e-73 281.2 368 48.9
COL.COLO4_32974 Corchorus olitorius HOM05D004225 ORTHO05D004728 1.6e-72 277.3 367 47.4
Potri.013G055300 Populus trichocarpa HOM05D004225 ORTHO05D004728 2.8e-72 276.6 363 48.8
QL07p018789 Quercus lobata HOM05D004225 ORTHO05D004728 2.8e-72 276.6 367 47.1
Atru.chr2.1407 Acer truncatum HOM05D004225 ORTHO05D004728 3.6e-72 276.2 369 48.2
Duzib177G1146 Durio zibethinus HOM05D004225 ORTHO05D004728 1.1e-71 274.6 367 47.4
Cc06_g07240 Coffea canephora HOM05D004225 ORTHO05D004728 1.8e-71 273.9 364 47.3
MD12G1006900 Malus domestica HOM05D004225 ORTHO05D004728 1.8e-71 273.9 366 47.0
MD14G1004600 Malus domestica HOM05D004225 ORTHO05D004728 2.4e-71 273.5 363 47.1
Actinidia03947 Actinidia chinensis HOM05D004225 ORTHO05D004728 5.3e-71 272.3 363 47.1
Ciclev10018636m.g Citrus clementina HOM05D004225 ORTHO05D004728 5.3e-71 272.3 370 47.0
Prupe.7G007400 Prunus persica HOM05D004225 ORTHO05D004728 6.9e-71 271.9 371 46.6
Migut.J00760 Erythranthe guttata HOM05D004225 ORTHO05D004728 1.2e-70 271.2 368 46.7
Manes.09G139100 Manihot esculenta HOM05D004225 ORTHO05D004728 1.5e-70 270.8 366 47.5
Nitab4.5_0022463g0010 Nicotiana tabacum HOM05D004225 ORTHO05D004728 1.1e-68 264.6 365 46.0
Nitab4.5_0001355g0010 Nicotiana tabacum HOM05D004225 ORTHO05D004728 9.3e-68 261.5 365 45.8
RcHm_v2.0_Chr3g0496671 Rosa chinensis HOM05D004225 ORTHO05D004728 2.3e-66 256.9 371 46.9
Sabra13G0049600 Salix brachista HOM05D004225 ORTHO05D004728 2.3e-66 256.9 364 49.5
Ca_08286_v3 Cicer arietinum L. HOM05D004225 ORTHO05D004728 1.1e-65 254.6 372 44.6
MBI11_g07706_MAGBIO Magnolia biondii HOM05D004225 ORTHO05D004728 1.5e-65 254.2 370 45.9
SGA_v2.0_scaffold112G31648 Striga asiatica HOM05D004225 ORTHO05D004728 3.3e-65 253.1 365 44.9
VMungo1383G3152 Vigna mungo HOM05D004225 ORTHO05D004728 3.3e-65 253.1 368 45.9
Gorai.007G259700 Gossypium raimondii HOM05D004225 ORTHO05D004728 4.3e-65 252.7 367 45.5
Medtr7g086050 Medicago truncatula HOM05D004225 ORTHO05D004728 9.6e-65 251.5 372 44.9
Gohir.D11G244200 Gossypium hirsutum HOM05D004225 ORTHO05D004728 1.6e-64 250.8 367 45.2
Phvul.001G113200 Phaseolus vulgaris HOM05D004225 ORTHO05D004728 1.6e-64 250.8 369 46.1
Glyma.16G038900 Glycine max HOM05D004225 ORTHO05D004728 3.7e-64 249.6 371 45.6
Peaxi162Scf00061g00247 Petunia axillaris HOM05D004225 ORTHO05D004728 3.7e-64 249.6 367 44.7
CSS0022490 Camellia sinensis var. sinensis HOM05D004225 ORTHO05D004728 3.1e-63 246.5 365 43.0
Glyma.19G113700 Glycine max HOM05D004225 ORTHO05D004728 4.0e-63 246.1 367 45.0
CANSAT78G2348 Cannabis sativa HOM05D004225 ORTHO05D004728 2.6e-62 243.4 366 44.0
DCAR_020662 Daucus carota HOM05D004225 ORTHO05D004728 4.5e-62 242.7 384 42.7
TAR633G0301 Trochodendron aralioides HOM05D004225 ORTHO05D004728 5.8e-62 242.3 369 43.1
CSS0005542 Camellia sinensis var. sinensis HOM05D004225 ORTHO05D004728 1.3e-61 241.1 365 42.5
Cpa.g.sc161.2 Carica papaya HOM05D004225 ORTHO05D004728 2.2e-61 240.4 364 44.0
TWI60G0668 Tripterygium wilfordii HOM05D004225 ORTHO05D004728 3.8e-61 239.6 366 44.0
Gohir.A11G233000 Gossypium hirsutum HOM05D004225 ORTHO05D004728 2.5e-60 236.9 367 43.9
Lj2A418T70 Lonicera japonica HOM05D004225 ORTHO05D004728 7.1e-60 235.3 376 42.0
FvH4_1g28360 Fragaria vesca HOM05D004225 ORTHO05D004728 1.0e-58 231.5 367 43.9
TWI32G0579 Tripterygium wilfordii HOM05D004225 ORTHO05D004728 1.3e-58 231.1 369 43.4
ECA238G0084 Erigeron canadensis HOM05D004225 ORTHO05D004728 1.8e-58 230.7 366 44.8
Lalb_Chr14g0364611 Lupinus albus HOM05D004225 ORTHO05D004728 1.8e-58 230.7 371 41.8
Eucgr.A02119 Eucalyptus grandis HOM05D004225 ORTHO05D004728 2.3e-58 230.3 366 41.0
CAN.G170.116 Capsicum annuum HOM05D004225 ORTHO05D004728 3.9e-58 229.6 365 43.3
FAN19G2926 Fragaria x ananassa HOM05D000495 ORTHO05D004728 3.9e-58 229.6 367 43.6
PSO339G3394 Papaver somniferum HOM05D004225 ORTHO05D004728 6.7e-58 228.8 375 42.4
Sp3g02770 Schrenkiella parvula HOM05D004225 ORTHO05D004728 6.7e-58 228.8 369 40.4
ClCG02G007850 Citrullus lanatus HOM05D004225 ORTHO05D004728 8.7e-58 228.4 375 42.4
EL10Ac5g11767 Beta vulgaris HOM05D004225 ORTHO05D004728 1.9e-57 227.3 366 42.6
Aqoxy1G00553 Aquilegia oxysepala HOM05D004225 ORTHO05D004728 2.5e-57 226.9 370 42.7
MELO3C024751.2 Cucumis melo HOM05D004225 ORTHO05D004728 2.5e-57 226.9 373 41.8
FAN23G2269 Fragaria x ananassa HOM05D004225 ORTHO05D004728 4.3e-57 226.1 373 43.7
Solyc01g056570.3 Solanum lycopersicum HOM05D004225 ORTHO05D004728 5.7e-57 225.7 365 41.9
PSO384G1703 Papaver somniferum HOM05D004225 ORTHO05D004728 1.3e-56 224.6 375 42.1
Hund10817 Selenicereus undatus HOM05D004225 ORTHO05D004728 1.3e-56 224.6 363 43.3
Thhalv10019953m.g Eutrema salsugineum HOM05D004225 ORTHO05D004728 2.8e-56 223.4 372 39.5
Sed0003216 Sechium edule HOM05D004225 ORTHO05D004728 2.8e-56 223.4 375 41.6
PGSC0003DMG400005593 Solanum tuberosum HOM05D004225 ORTHO05D004728 4.8e-56 222.6 364 44.0
AT3G03790 Arabidopsis thaliana HOM05D004225 ORTHO05D004728 3.1e-55 219.9 374 40.4
HanXRQChr14g0453121 Helianthus annuus HOM05D004225 ORTHO05D004728 3.1e-55 219.9 381 41.5
arahy.Tifrunner.gnm1.ann1.MX8T8B Arachis hypogaea HOM05D004225 ORTHO05D004728 4.1e-55 219.5 376 40.7
Ah.12g059700 Amaranthus hybridus HOM05D004225 ORTHO05D004728 5.3e-55 219.2 365 41.4
arahy.Tifrunner.gnm1.ann1.4I2AVL Arachis hypogaea HOM05D004225 ORTHO05D004728 9.0e-55 218.4 376 40.4
Sopen01g020500 Solanum pennellii HOM05D004225 ORTHO05D004728 9.0e-55 218.4 364 40.7
THA.LOC104820785 Tarenaya hassleriana HOM05D004225 ORTHO05D004728 1.2e-54 218.0 375 42.9
CsaV3_2G035890 Cucumis sativus L. HOM05D004225 ORTHO05D004728 2.0e-54 217.2 373 41.3
PGR042G0202 Punica granatum HOM05D004225 ORTHO05D004728 2.0e-54 217.2 368 42.4
Sc01g0005150 Simmondsia chinensis HOM05D004225 ORTHO05D004728 1.0e-53 214.9 368 41.0
AUR62039726 Chenopodium quinoa HOM05D004225 ORTHO05D004728 2.9e-53 213.4 366 39.9
BraA05t23099Z Brassica rapa HOM05D004225 ORTHO05D004728 1.9e-52 210.7 372 39.0
Carub.0003s0296 Capsella rubella HOM05D004225 ORTHO05D004728 1.9e-52 210.7 372 39.8
Lsat_1_v5_gn_2_103941 Lactuca sativa HOM05D004225 ORTHO05D004728 1.9e-52 210.7 382 41.6
Aa31LG5G14340 Aethionema arabicum HOM05D004225 ORTHO05D004728 4.2e-52 209.5 364 40.4
AL3G13620 Arabidopsis lyrata HOM05D004225 ORTHO05D004728 5.5e-52 209.1 374 38.5
Nn2g14481 Nelumbo nucifera HOM05D004225 ORTHO05D004728 2.7e-51 206.8 370 40.0
Lj1g0011347 Lotus japonicus HOM05D004225 ORTHO05D004728 2.3e-50 203.8 368 40.5
CARHR077860 Cardamine hirsuta HOM05D004225 ORTHO05D004728 8.7e-50 201.8 375 39.7
BolC5t34981H Brassica oleracea HOM05D004225 ORTHO05D004728 4.3e-49 199.5 377 38.7
BcaC05g29906 Brassica carinata HOM05D004225 ORTHO05D004728 5.7e-49 199.1 377 38.7
A05p43600 Brassica napus HOM05D004225 ORTHO05D004728 7.4e-49 198.7 372 38.7
unitig_27.g24735 Utricularia gibba HOM05D004225 ORTHO05D004728 4.8e-48 196.1 366 40.7
Psat3g087760 Pisum sativum HOM05D004225 ORTHO05D004728 4.5e-46 189.5 258 46.1
FAN26G1663 Fragaria x ananassa HOM05D004225 ORTHO05D004728 5.9e-46 189.1 350 40.3
Zm00001eb300770 Zea mays HOM05D004225 ORTHO05D004728 1.3e-45 188.0 381 36.7
C05p63190 Brassica napus HOM05D004225 ORTHO05D004728 2.2e-45 187.2 372 37.6
HPP92_028052 Vanilla planifolia HOM05D004225 ORTHO05D004728 6.5e-45 185.7 370 37.8
Gohir.A13G165100 Gossypium hirsutum HOM05D004225 ORTHO05D004728 3.9e-42 176.4 334 37.7
Gorai.013G194200 Gossypium raimondii HOM05D004225 ORTHO05D004728 2.0e-41 174.1 372 36.8
ATR0697G085 Amborella trichopoda HOM05D004225 ORTHO05D004728 2.2e-40 170.6 394 36.3
TPR.G39963 Trifolium pratense HOM05D004225 ORTHO05D004728 4.8e-40 169.5 189 51.3
BcaC05g30250 Brassica carinata HOM05D004225 ORTHO05D004728 1.1e-39 168.3 378 35.7
AUR62036278 Chenopodium quinoa HOM05D004225 ORTHO05D004728 3.1e-39 166.8 365 34.8
Gohir.D13G168000 Gossypium hirsutum HOM05D004225 ORTHO05D004728 1.1e-33 148.3 352 35.2
SHI13905 Sapria himalayana HOM05D004225 ORTHO05D004728 6.3e-32 142.5 372 33.1
BcaC05g30283 Brassica carinata HOM05D004225 ORTHO05D004728 9.1e-31 138.7 193 47.2
SEGI_41481 Sequoiadendron giganteum HOM05D004225 ORTHO05D004728 1.4e-26 124.8 431 31.8
Dinv11924 Davidia involucrata HOM05D004225 ORTHO05D004728 8.8e-26 122.1 189 42.9
Pp3c8_24330 Physcomitrium patens HOM05D004225 ORTHO05D004728 1.0e-18 98.6 378 29.1
Psat3g087720 Pisum sativum HOM05D004225 ORTHO05D004728 1.8e-15 87.8 129 44.2
AagrBONN_evm.TU.Sc2ySwM_228.1834 Anthoceros agrestis HOM05D004225 ORTHO05D004728 2.4e-15 87.4 412 27.9
Mapoly0082s0025 Marchantia polymorpha HOM05D004225 ORTHO05D004728 2.4e-15 87.4 437 27.0
TPR.G31024 Trifolium pratense HOM05D004225 ORTHO05D004728 4.1e-15 86.7 146 39.7
SMO367G1027 Selaginella moellendorffii HOM05D004225 ORTHO05D004728 7.7e-14 82.4 381 26.8
CDE10G0988 Ceratophyllum demersum HOM05D004225 ORTHO05D004728 4.4e-09 66.6 192 32.8
Os07g0165200 Oryza sativa ssp. japonica HOM05D004225 ORTHO05D004728 2.2e-08 64.3 120 36.7


User provided reference genes

Program Settings