Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029438.1 Olea europaea HOM05D004655 ORTHO05D005567 5.1e-63 244.2 119 100.0
SGA_v2.0_scaffold70G23458 Striga asiatica HOM05D004655 ORTHO05D005567 2.3e-15 85.9 107 48.6
FvH4_6g44420 Fragaria vesca HOM05D004655 ORTHO05D005567 6.7e-15 84.3 123 43.1
FAN14G2207 Fragaria x ananassa HOM05D004655 ORTHO05D005567 6.7e-15 84.3 123 43.1
Prupe.3G228700 Prunus persica HOM05D004655 ORTHO05D005567 6.7e-15 84.3 129 40.3
Duzib052G1220 Durio zibethinus HOM05D004655 ORTHO05D005567 8.8e-15 84.0 98 48.0
FAN02G3511 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.5e-14 83.2 128 39.8
FAN05G4368 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.5e-14 83.2 128 39.8
FAN09G1462 Fragaria x ananassa HOM05D004655 ORTHO05D005567 2.0e-14 82.8 126 41.3
RcHm_v2.0_Chr2g0161411 Rosa chinensis HOM05D004655 ORTHO05D005567 2.0e-14 82.8 109 47.7
FAN02G1121 Fragaria x ananassa HOM05D004655 ORTHO05D005567 2.5e-14 82.4 128 39.1
Ca_20707_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 3.3e-14 82.0 87 50.6
Manes.13G152400 Manihot esculenta HOM05D004655 ORTHO05D005567 3.3e-14 82.0 127 40.2
C08p41940 Brassica napus HOM05D004655 ORTHO05D005567 4.3e-14 81.6 113 41.6
Aqoxy1G03905 Aquilegia oxysepala HOM05D004655 ORTHO05D005567 5.7e-14 81.3 80 52.5
Migut.H01014 Erythranthe guttata HOM05D004655 ORTHO05D005567 5.7e-14 81.3 120 42.5
Potri.019G117900 Populus trichocarpa HOM05D004655 ORTHO05D005567 7.4e-14 80.9 128 39.1
Lj1C737G5 Lonicera japonica HOM05D004655 ORTHO05D005567 9.7e-14 80.5 109 50.5
Sc12g0002690 Simmondsia chinensis HOM05D004655 ORTHO05D005567 9.7e-14 80.5 122 44.3
Zm00001eb324100 Zea mays HOM05D004655 ORTHO05D005567 9.7e-14 80.5 75 57.3
Actinidia12466 Actinidia chinensis HOM05D004655 ORTHO05D005567 1.3e-13 80.1 125 41.6
Actinidia18535 Actinidia chinensis HOM05D004655 ORTHO05D005567 1.3e-13 80.1 125 41.6
Aa31LG8G17800 Aethionema arabicum HOM05D004655 ORTHO05D005567 1.3e-13 80.1 47 78.7
CANSAT64G1156 Cannabis sativa HOM05D004655 ORTHO05D005567 1.3e-13 80.1 127 39.4
Thhalv10002049m.g Eutrema salsugineum HOM05D004655 ORTHO05D005567 1.3e-13 80.1 47 76.6
Pp3c19_17570 Physcomitrium patens HOM05D004655 ORTHO05D005567 1.3e-13 80.1 73 56.2
CARHR111640 Cardamine hirsuta HOM05D004655 ORTHO05D005567 1.7e-13 79.7 74 55.4
ClCG00G002920 Citrullus lanatus HOM05D004655 ORTHO05D005567 1.7e-13 79.7 47 76.6
ClCG02G001360 Citrullus lanatus HOM05D004655 ORTHO05D005567 1.7e-13 79.7 47 76.6
SalBow7G2858 Salvia bowleyana HOM05D004655 ORTHO05D005567 1.7e-13 79.7 58 65.5
Haze_13070 Corylus avellana HOM05D004655 ORTHO05D005567 2.2e-13 79.3 118 43.2
AL3G54160 Arabidopsis lyrata HOM05D004655 ORTHO05D005567 2.8e-13 79.0 74 55.4
AT2G20890 Arabidopsis thaliana HOM05D004655 ORTHO05D005567 2.8e-13 79.0 74 55.4
BcaC07g41186 Brassica carinata HOM05D004655 ORTHO05D005567 2.8e-13 79.0 47 74.5
A09p58650 Brassica napus HOM05D004655 ORTHO05D005567 2.8e-13 79.0 47 74.5
BolC8t51757H Brassica oleracea HOM05D004655 ORTHO05D005567 2.8e-13 79.0 47 74.5
BraA09t41251Z Brassica rapa HOM05D004655 ORTHO05D005567 2.8e-13 79.0 47 74.5
Carub.0003s3556 Capsella rubella HOM05D004655 ORTHO05D005567 2.8e-13 79.0 47 76.6
CsaV3_7G004070 Cucumis sativus L. HOM05D004655 ORTHO05D005567 2.8e-13 79.0 49 71.4
Cpa.g.sc34.80 Carica papaya HOM05D004655 ORTHO05D005567 3.7e-13 78.6 125 38.4
CiPaw.03G168300 Carya illinoinensis HOM05D004655 ORTHO05D005567 3.7e-13 78.6 47 76.6
Dinv15502 Davidia involucrata HOM05D004655 ORTHO05D005567 3.7e-13 78.6 43 81.4
Hma1.2p1_0662F.1_g198360 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 3.7e-13 78.6 43 81.4
Sp3g34160 Schrenkiella parvula HOM05D004655 ORTHO05D005567 3.7e-13 78.6 47 74.5
THA.LOC104804073 Tarenaya hassleriana HOM05D004655 ORTHO05D005567 3.7e-13 78.6 74 54.1
arahy.Tifrunner.gnm1.ann1.YR7HYJ Arachis hypogaea HOM05D004655 ORTHO05D005567 4.8e-13 78.2 42 83.3
MSTRG.14176 Avicennia marina HOM05D004655 ORTHO05D005567 6.3e-13 77.8 114 42.1
Lsat_1_v5_gn_3_40720 Lactuca sativa HOM05D004655 ORTHO05D005567 6.3e-13 77.8 126 38.1
Glyma.06G299100 Glycine max HOM05D004655 ORTHO05D005567 8.2e-13 77.4 48 72.9
Glyma.12G106600 Glycine max HOM05D004655 ORTHO05D005567 8.2e-13 77.4 48 72.9
Lalb_Chr01g0005451 Lupinus albus HOM05D004655 ORTHO05D005567 8.2e-13 77.4 80 51.2
Os07g0558500 Oryza sativa ssp. japonica HOM05D004655 ORTHO05D005567 8.2e-13 77.4 43 81.4
BcaB08g34948 Brassica carinata HOM05D004655 ORTHO05D005567 1.1e-12 77.0 42 78.6
CSS0017466 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 1.1e-12 77.0 48 75.0
CAN.G508.2 Capsicum annuum HOM05D004655 ORTHO05D005567 1.1e-12 77.0 69 56.5
CiPaw.04G122300 Carya illinoinensis HOM05D004655 ORTHO05D005567 1.1e-12 77.0 78 51.3
MD09G1097200 Malus domestica HOM05D004655 ORTHO05D005567 1.1e-12 77.0 42 81.0
Phvul.011G110700 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 1.1e-12 77.0 48 72.9
Sabra19G0118300 Salix brachista HOM05D004655 ORTHO05D005567 1.1e-12 77.0 124 37.9
Sabra19G0135300 Salix brachista HOM05D004655 ORTHO05D005567 1.1e-12 77.0 124 37.9
SGA_v2.0_scaffold34G13911 Striga asiatica HOM05D004655 ORTHO05D005567 1.1e-12 77.0 42 83.3
VMungo1127G2245 Vigna mungo HOM05D004655 ORTHO05D005567 1.1e-12 77.0 48 72.9
arahy.Tifrunner.gnm1.ann1.XZ54ZU Arachis hypogaea HOM05D004655 ORTHO05D005567 1.4e-12 76.6 42 81.0
COL.COLO4_13659 Corchorus olitorius HOM05D004655 ORTHO05D005567 1.4e-12 76.6 43 79.1
MELO3C018772.2 Cucumis melo HOM05D004655 ORTHO05D005567 1.4e-12 76.6 47 72.3
Duzib248G0290 Durio zibethinus HOM05D004655 ORTHO05D005567 1.4e-12 76.6 43 79.1
Sed0025834 Sechium edule HOM05D004655 ORTHO05D005567 1.4e-12 76.6 47 72.3
Thecc.02G170400 Theobroma cacao HOM05D004655 ORTHO05D005567 1.4e-12 76.6 48 72.9
Sc12g0003940 Simmondsia chinensis HOM05D004655 ORTHO05D005567 1.8e-12 76.3 58 63.8
Ciclev10016098m.g Citrus clementina HOM05D004655 ORTHO05D005567 2.4e-12 75.9 122 39.3
MD17G1085500 Malus domestica HOM05D004655 ORTHO05D005567 2.4e-12 75.9 42 78.6
unitig_21.g20001 Utricularia gibba HOM05D004655 ORTHO05D005567 2.4e-12 75.9 47 72.3
GSVIVG01029990001 Vitis vinifera HOM05D004655 ORTHO05D005567 2.4e-12 75.9 43 79.1
Zm00001eb106830 Zea mays HOM05D004655 ORTHO05D005567 2.4e-12 75.9 43 81.4
HanXRQChr06g0171121 Helianthus annuus HOM05D004655 ORTHO05D005567 3.1e-12 75.5 69 55.1
Potri.013G148400 Populus trichocarpa HOM05D004655 ORTHO05D005567 3.1e-12 75.5 140 35.0
CSS0020863 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 4.1e-12 75.1 48 72.9
Gohir.A04G106100 Gossypium hirsutum HOM05D004655 ORTHO05D005567 4.1e-12 75.1 75 53.3
Gohir.D04G146200 Gossypium hirsutum HOM05D004655 ORTHO05D005567 4.1e-12 75.1 75 53.3
Gorai.012G132100 Gossypium raimondii HOM05D004655 ORTHO05D005567 4.1e-12 75.1 75 53.3
Lalb_Chr22g0356311 Lupinus albus HOM05D004655 ORTHO05D005567 4.1e-12 75.1 80 51.2
Nn1g06795 Nelumbo nucifera HOM05D004655 ORTHO05D005567 4.1e-12 75.1 43 76.7
Nn1g06798 Nelumbo nucifera HOM05D004655 ORTHO05D005567 4.1e-12 75.1 43 76.7
Psat7g149680 Pisum sativum HOM05D004655 ORTHO05D005567 4.1e-12 75.1 47 72.3
QL08p036998 Quercus lobata HOM05D004655 ORTHO05D005567 4.1e-12 75.1 47 72.3
SMO266G0053 Selaginella moellendorffii HOM05D004655 ORTHO05D005567 4.1e-12 75.1 73 54.8
SEGI_32441 Sequoiadendron giganteum HOM05D004655 ORTHO05D005567 4.1e-12 75.1 43 74.4
PGSC0003DMG400018330 Solanum tuberosum HOM05D004655 ORTHO05D005567 4.1e-12 75.1 55 65.5
TWI75G0473 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 4.1e-12 75.1 75 50.7
AUR62032763 Chenopodium quinoa HOM05D004655 ORTHO05D005567 5.3e-12 74.7 42 78.6
Duzib132G0437 Durio zibethinus HOM05D004655 ORTHO05D005567 5.3e-12 74.7 48 70.8
Duzib132G0466 Durio zibethinus HOM05D004655 ORTHO05D005567 5.3e-12 74.7 48 70.8
Sopen07g028730 Solanum pennellii HOM05D004655 ORTHO05D005567 5.3e-12 74.7 55 63.6
Ah.01g014420 Amaranthus hybridus HOM05D004655 ORTHO05D005567 6.9e-12 74.3 69 55.1
ATR0693G119 Amborella trichopoda HOM05D004655 ORTHO05D005567 6.9e-12 74.3 48 70.8
EL10Ac9g20731 Beta vulgaris HOM05D004655 ORTHO05D005567 6.9e-12 74.3 42 78.6
AUR62037119 Chenopodium quinoa HOM05D004655 ORTHO05D005567 6.9e-12 74.3 42 78.6
Ca_01544_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 6.9e-12 74.3 47 70.2
Glyma.12G200200 Glycine max HOM05D004655 ORTHO05D005567 6.9e-12 74.3 47 68.1
Glyma.13G302100 Glycine max HOM05D004655 ORTHO05D005567 6.9e-12 74.3 47 68.1
arahy.Tifrunner.gnm1.ann1.S2JPPU Arachis hypogaea HOM05D004655 ORTHO05D005567 9.1e-12 73.9 75 50.7
Dinv13829 Davidia involucrata HOM05D004655 ORTHO05D005567 9.1e-12 73.9 43 76.7
Mapoly0010s0156 Marchantia polymorpha HOM05D004655 ORTHO05D005567 9.1e-12 73.9 43 79.1
TWI36G0222 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 9.1e-12 73.9 42 76.2
Medtr4g045980 Medicago truncatula HOM05D004655 ORTHO05D005567 1.2e-11 73.6 80 50.0
TPR.G21652 Trifolium pratense HOM05D004655 ORTHO05D005567 1.2e-11 73.6 80 50.0
CSS0004933 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 1.5e-11 73.2 48 70.8
ECA246G4617 Erigeron canadensis HOM05D004655 ORTHO05D005567 1.5e-11 73.2 75 49.3
Eucgr.A01774 Eucalyptus grandis HOM05D004655 ORTHO05D005567 1.5e-11 73.2 47 70.2
Medtr2g089795 Medicago truncatula HOM05D004655 ORTHO05D005567 1.5e-11 73.2 48 68.8
AagrBONN_evm.TU.Sc2ySwM_344.251 Anthoceros agrestis HOM05D004655 ORTHO05D005567 2.0e-11 72.8 109 39.4
Cfa014528 Carpinus fangiana HOM05D004655 ORTHO05D005567 2.0e-11 72.8 42 78.6
Lj3g0013026 Lotus japonicus HOM05D004655 ORTHO05D005567 2.0e-11 72.8 42 76.2
MBI18_g27693_MAGBIO Magnolia biondii HOM05D004655 ORTHO05D005567 2.0e-11 72.8 48 66.7
Nn1g03859 Nelumbo nucifera HOM05D004655 ORTHO05D005567 2.0e-11 72.8 43 72.1
Phvul.005G108600 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 2.0e-11 72.8 47 68.1
PGR042G1100 Punica granatum HOM05D004655 ORTHO05D005567 2.0e-11 72.8 55 61.8
VMungo1080G0396 Vigna mungo HOM05D004655 ORTHO05D005567 2.0e-11 72.8 47 68.1
arahy.Tifrunner.gnm1.ann1.81TW8H Arachis hypogaea HOM05D004655 ORTHO05D005567 2.6e-11 72.4 75 49.3
DCAR_019200 Daucus carota HOM05D004655 ORTHO05D005567 2.6e-11 72.4 43 72.1
Lj3g0017119 Lotus japonicus HOM05D004655 ORTHO05D005567 3.4e-11 72.0 42 76.2
TAR627G0814 Trochodendron aralioides HOM05D004655 ORTHO05D005567 4.5e-11 71.6 69 50.7
TAR629G1482 Trochodendron aralioides HOM05D004655 ORTHO05D005567 4.5e-11 71.6 43 72.1
Ah.01g005210 Amaranthus hybridus HOM05D004655 ORTHO05D005567 5.9e-11 71.2 42 73.8
PSO541G1277 Papaver somniferum HOM05D004655 ORTHO05D005567 5.9e-11 71.2 90 47.8
AUR62037125 Chenopodium quinoa HOM05D001718 ORTHO05D008006 7.7e-11 70.9 42 73.8
PSO675G0243 Papaver somniferum HOM05D004655 ORTHO05D005567 7.7e-11 70.9 42 76.2
Rhsim06G0153100 Rhododendron simsii HOM05D004655 ORTHO05D005567 7.7e-11 70.9 48 68.8
SalBow1G2826 Salvia bowleyana HOM05D004655 ORTHO05D005567 7.7e-11 70.9 69 50.7
HPP92_012362 Vanilla planifolia HOM05D004655 ORTHO05D005567 7.7e-11 70.9 75 49.3
Atru.chr6.3084 Acer truncatum HOM05D004655 ORTHO05D005567 1.0e-10 70.5 47 66.0
DCAR_012973 Daucus carota HOM05D004655 ORTHO05D005567 1.0e-10 70.5 43 72.1
Cc05_g06070 Coffea canephora HOM05D004655 ORTHO05D005567 1.3e-10 70.1 43 69.8
Hma1.2p1_0565F.1_g179650 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 1.7e-10 69.7 75 50.7
Psat5g269080 Pisum sativum HOM05D004655 ORTHO05D005567 1.7e-10 69.7 47 63.8
AUR62032764 Chenopodium quinoa HOM05D001718 ORTHO05D008006 2.2e-10 69.3 42 71.4
TPR.G18073 Trifolium pratense HOM05D004655 ORTHO05D005567 2.2e-10 69.3 47 66.0
CDE05G0437 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 3.8e-10 68.6 76 47.4
Pp3c21_14540 Physcomitrium patens HOM05D004655 ORTHO05D005567 3.8e-10 68.6 47 70.2
CDE05G0433 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 8.5e-10 67.4 75 48.0
vmacro12257 Vaccinium macrocarpon HOM05D004655 ORTHO05D005567 1.4e-09 66.6 81 44.4
CBR_g78876 Chara braunii HOM05D004655 ORTHO05D005567 1.2e-08 63.5 40 70.0
Oeu037167.1 Olea europaea HOM05D004655 ORTHO05D005567 1.0e-07 60.5 35 77.1
Peaxi162Scf00007g02516 Petunia axillaris HOM05D004655 ORTHO05D005567 2.0e-06 56.2 56 51.8
MCO07G428 Micromonas commoda HOM05D004655 ORTHO05D005567 5.7e-06 54.7 69 42.0


User provided reference genes

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