Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 6.8e-60 233.8 119 100.0
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 1.2e-43 179.9 119 74.8
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 4.9e-42 174.5 126 74.6
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 4.9e-42 174.5 124 76.6
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 1.6e-40 169.5 128 69.5
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 6.0e-40 167.5 123 74.0
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 7.9e-40 167.2 124 75.0
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 6.7e-39 164.1 123 76.4
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 9.6e-38 160.2 125 72.8
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 6.2e-37 157.5 125 72.8
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 9.0e-36 153.7 127 68.5
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 2.6e-35 152.1 124 68.5
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 2.6e-35 152.1 122 62.3
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 3.4e-35 151.8 119 68.9
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 5.8e-35 151.0 123 69.1
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.3e-34 149.8 123 65.9
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 1.3e-34 149.8 123 68.3
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 1.3e-34 149.8 123 61.0
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 1.7e-34 149.4 123 68.3
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 1.7e-34 149.4 121 64.5
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 2.2e-34 149.1 122 69.7
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 2.2e-34 149.1 121 69.4
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 2.9e-34 148.7 117 63.2
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 2.9e-34 148.7 123 67.5
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 3.8e-34 148.3 122 60.7
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 4.9e-34 147.9 120 67.5
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 6.5e-34 147.5 127 65.4
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 6.5e-34 147.5 125 66.4
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 2.5e-33 145.6 126 67.5
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 3.2e-33 145.2 124 60.5
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 4.2e-33 144.8 127 66.1
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 5.5e-33 144.4 127 66.9
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 5.5e-33 144.4 123 67.5
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 5.5e-33 144.4 121 63.6
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 5.5e-33 144.4 121 63.6
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 7.1e-33 144.1 128 63.3
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 7.1e-33 144.1 124 65.3
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 7.1e-33 144.1 123 68.3
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 7.1e-33 144.1 126 65.1
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 9.3e-33 143.7 125 63.2
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 2.7e-32 142.1 125 65.6
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 3.5e-32 141.7 132 62.1
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 1.0e-31 140.2 119 66.4
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 1.0e-31 140.2 119 66.4
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 1.8e-31 139.4 111 72.1
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 1.8e-31 139.4 123 65.9
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 2.3e-31 139.0 122 64.8
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 3.9e-31 138.3 122 65.6
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 6.7e-31 137.5 126 61.9
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 1.5e-30 136.3 117 63.2
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 1.9e-30 136.0 125 64.0
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 1.9e-30 136.0 124 66.9
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 1.9e-30 136.0 132 61.4
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 2.5e-30 135.6 119 62.2
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 3.3e-30 135.2 123 60.2
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 3.3e-30 135.2 117 63.2
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 3.3e-30 135.2 131 64.9
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 4.3e-30 134.8 117 61.5
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 4.3e-30 134.8 117 61.5
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 9.6e-30 133.7 125 61.6
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 9.6e-30 133.7 116 69.0
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 1.3e-29 133.3 125 59.2
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 1.3e-29 133.3 119 63.0
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 3.7e-29 131.7 120 64.2
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 4.8e-29 131.3 117 57.3
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 6.2e-29 131.0 117 61.5
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 1.1e-28 130.2 122 62.3
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 1.1e-28 130.2 119 62.2
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 1.8e-28 129.4 115 61.7
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 1.8e-28 129.4 118 61.9
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 1.8e-28 129.4 118 62.7
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 2.4e-28 129.0 122 62.3
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 2.4e-28 129.0 109 67.9
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 3.1e-28 128.6 110 65.5
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 4.1e-28 128.3 119 60.5
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 5.3e-28 127.9 110 65.5
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 1.2e-27 126.7 118 61.0
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 2.0e-27 125.9 124 57.3
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 2.6e-27 125.6 118 58.5
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 3.4e-27 125.2 119 58.8
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 4.5e-27 124.8 110 66.4
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 4.5e-27 124.8 111 66.7
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 4.5e-27 124.8 123 49.6
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 5.8e-27 124.4 123 61.0
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 5.8e-27 124.4 111 56.8
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 5.8e-27 124.4 129 60.5
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 5.8e-27 124.4 129 60.5
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 7.6e-27 124.0 109 65.1
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 7.6e-27 124.0 127 60.6
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 1.0e-26 123.6 126 57.1
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 1.0e-26 123.6 117 53.8
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.3e-26 123.2 112 63.4
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 2.2e-26 122.5 113 62.8
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 2.9e-26 122.1 122 56.6
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 3.8e-26 121.7 122 59.8
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 3.8e-26 121.7 120 57.5
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 3.8e-26 121.7 120 57.5
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 5.0e-26 121.3 120 55.8
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 5.0e-26 121.3 120 55.8
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 5.0e-26 121.3 108 63.0
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 6.5e-26 120.9 123 54.5
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 6.5e-26 120.9 110 64.5
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.1e-25 120.2 111 55.9
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 1.1e-25 120.2 119 50.4
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.1e-25 120.2 120 56.7
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 1.1e-25 120.2 120 60.0
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 1.1e-25 120.2 119 59.7
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 1.1e-25 120.2 124 58.9
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 1.9e-25 119.4 117 51.3
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 1.9e-25 119.4 117 51.3
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 1.9e-25 119.4 117 51.3
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 1.9e-25 119.4 117 51.3
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 1.9e-25 119.4 117 51.3
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 2.5e-25 119.0 122 61.5
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 3.2e-25 118.6 116 51.7
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 3.2e-25 118.6 117 53.8
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 7.2e-25 117.5 112 63.4
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 9.3e-25 117.1 125 59.2
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 9.3e-25 117.1 111 65.8
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 1.2e-24 116.7 117 53.0
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 1.2e-24 116.7 117 53.0
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 1.6e-24 116.3 117 52.1
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 1.6e-24 116.3 117 53.0
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 1.6e-24 116.3 116 62.1
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 2.1e-24 115.9 112 63.4
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 2.1e-24 115.9 112 63.4
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 2.1e-24 115.9 115 57.4
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 2.1e-24 115.9 117 52.1
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 2.1e-24 115.9 117 52.1
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 2.7e-24 115.5 123 59.3
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 3.5e-24 115.2 123 54.5
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 3.5e-24 115.2 115 49.6
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 3.5e-24 115.2 107 58.9
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 6.1e-24 114.4 115 50.4
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 6.1e-24 114.4 103 56.3
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 7.9e-24 114.0 119 48.7
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 7.9e-24 114.0 119 48.7
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 7.9e-24 114.0 115 50.4
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 1.0e-23 113.6 112 60.7
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 1.3e-23 113.2 123 53.7
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 1.8e-23 112.8 121 54.5
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 1.8e-23 112.8 121 54.5
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 1.8e-23 112.8 121 54.5
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 1.8e-23 112.8 114 60.5
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 1.8e-23 112.8 119 56.3
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 3.0e-23 112.1 127 47.2
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 3.9e-23 111.7 127 47.2
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 3.9e-23 111.7 127 47.2
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 3.9e-23 111.7 122 58.2
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 3.9e-23 111.7 137 46.0
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 5.1e-23 111.3 112 58.9
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 8.7e-23 110.5 123 53.7
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.5e-22 109.8 121 43.8
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 3.3e-22 108.6 129 46.5
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 5.7e-22 107.8 105 57.1
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 7.4e-22 107.5 123 46.3
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 9.7e-22 107.1 129 47.3
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 1.3e-21 106.7 114 57.0
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 2.8e-21 105.5 124 44.4
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 4.8e-21 104.8 102 53.9
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 8.2e-21 104.0 124 43.5
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 1.4e-20 103.2 122 44.3
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 1.4e-20 103.2 104 54.8
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 9.0e-20 100.5 112 50.0
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 1.2e-19 100.1 150 37.3
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 3.4e-19 98.6 123 48.0
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 4.5e-19 98.2 85 64.7
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 2.2e-18 95.9 103 45.6
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 1.9e-17 92.8 115 44.3
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 5.5e-17 91.3 67 65.7
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 1.6e-16 89.7 111 52.3
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 5.7e-14 81.3 141 37.6
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 7.4e-14 80.9 157 35.7
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 9.7e-14 80.5 119 44.5
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 2.2e-13 79.3 97 44.3
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 4.8e-13 78.2 150 34.7
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 2.4e-12 75.9 113 41.6
Pp3c10_24000 Physcomitrium patens HOM05D003630 ORTHO05D004151 6.5e-10 67.8 155 31.0
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.4e-09 66.6 89 38.2
AagrBONN_evm.TU.Sc2ySwM_362.1976 Anthoceros agrestis HOM05D003630 ORTHO05D004151 9.4e-09 63.9 63 49.2
Pp3c20_21690 Physcomitrium patens HOM05D003630 ORTHO05D004151 9.4e-09 63.9 155 31.0
Pp3c23_13750 Physcomitrium patens HOM05D003630 ORTHO05D004151 9.4e-09 63.9 163 28.8
Pp3c24_1050 Physcomitrium patens HOM05D003630 ORTHO05D004151 1.4e-07 60.1 152 25.0
ATR0681G069 Amborella trichopoda HOM05D002144 ORTHO05D002170 1.1e-06 57.0 118 32.2
MBI19_g38000_MAGBIO Magnolia biondii HOM05D002144 ORTHO05D002170 5.7e-06 54.7 118 31.4


User provided reference genes

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