Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029332.2 Olea europaea HOM05D006657 ORTHO05D005964 0.0e+00 1166.8 588 100.0
Oeu055400.1 Olea europaea HOM05D006657 ORTHO05D005964 1.0e-212 743.8 541 72.5
Dinv17292 Davidia involucrata HOM05D006657 ORTHO05D005964 1.5e-75 288.1 568 36.4
MSTRG.26967 Avicennia marina HOM05D006657 ORTHO05D005964 2.4e-73 280.8 557 36.4
SalBow4G2342 Salvia bowleyana HOM05D006657 ORTHO05D005964 5.4e-73 279.6 537 38.0
SalBow4G2934 Salvia bowleyana HOM05D006657 ORTHO05D005964 2.0e-72 277.7 537 38.0
Dinv29204 Davidia involucrata HOM05D006657 ORTHO05D005964 8.0e-69 265.8 555 35.9
Migut.F00140 Erythranthe guttata HOM05D006657 ORTHO05D005964 6.8e-68 262.7 547 36.0
Cc07_g20200 Coffea canephora HOM05D006657 ORTHO05D005964 8.3e-58 229.2 535 34.8
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 4.7e-53 213.4 536 31.9
Actinidia34275 Actinidia chinensis HOM05D006657 ORTHO05D005964 5.1e-47 193.4 544 31.6
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 2.5e-46 191.0 509 31.0
PGSC0003DMG400000558 Solanum tuberosum HOM05D006657 ORTHO05D005964 2.8e-45 187.6 546 32.8
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 2.4e-44 184.5 552 33.0
Sopen03g021870 Solanum pennellii HOM05D006657 ORTHO05D005964 7.6e-43 179.5 551 32.5
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 1.1e-41 175.6 512 30.5
Solyc03g080140.3 Solanum lycopersicum HOM05D006657 ORTHO05D005964 1.4e-41 175.3 551 31.9
SGA_v2.0_scaffold44G16853 Striga asiatica HOM05D006657 ORTHO05D005964 5.4e-41 173.3 530 31.3
Nitab4.5_0000021g0080 Nicotiana tabacum HOM05D006657 ORTHO05D005964 4.6e-40 170.2 526 32.7
Peaxi162Scf00912g00114 Petunia axillaris HOM05D006657 ORTHO05D005964 1.3e-39 168.7 528 32.4
Nitab4.5_0006821g0010 Nicotiana tabacum HOM05D006657 ORTHO05D005964 8.7e-39 166.0 530 32.6
Rhsim09G0210400 Rhododendron simsii HOM05D006657 ORTHO05D005964 1.9e-38 164.9 525 29.9
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 3.3e-38 164.1 517 31.7
vmacro10166 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 2.1e-37 161.4 526 29.1
QL09p006779 Quercus lobata HOM05D006657 ORTHO05D005964 9.0e-36 156.0 495 31.5
Cfa016147 Carpinus fangiana HOM05D006657 ORTHO05D005964 2.9e-34 151.0 503 30.2
Haze_00307 Corylus avellana HOM05D006657 ORTHO05D005964 1.9e-33 148.3 503 30.2
DCAR_008990 Daucus carota HOM05D006657 ORTHO05D005964 1.9e-33 148.3 514 28.6
Ciclev10018632m.g Citrus clementina HOM05D006657 ORTHO05D005964 4.2e-33 147.1 507 30.0
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 4.2e-33 147.1 569 27.1
Rhsim03G0216600 Rhododendron simsii HOM05D006657 ORTHO05D005964 2.1e-32 144.8 523 29.1
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 4.6e-32 143.7 542 28.4
Duzib205G0597 Durio zibethinus HOM05D006657 ORTHO05D005964 2.5e-30 137.9 567 27.3
SGA_v2.0_scaffold18G08476 Striga asiatica HOM05D006657 ORTHO05D005964 3.3e-30 137.5 457 29.8
Atru.chr12.2479 Acer truncatum HOM05D006657 ORTHO05D005964 9.6e-30 136.0 413 29.3
Thecc.03G210000 Theobroma cacao HOM05D006657 ORTHO05D005964 1.3e-29 135.6 551 28.3
CiPaw.05G206100 Carya illinoinensis HOM05D006657 ORTHO05D005964 2.1e-29 134.8 525 29.7
Manes.01G044100 Manihot esculenta HOM05D006657 ORTHO05D005964 2.4e-28 131.3 509 27.7
Potri.015G003700 Populus trichocarpa HOM05D006657 ORTHO05D005964 3.1e-28 131.0 534 28.3
Sabra12G0008600 Salix brachista HOM05D006657 ORTHO05D005964 9.0e-28 129.4 575 27.3
Sabra12G0004100 Salix brachista HOM05D006657 ORTHO05D005964 1.5e-27 128.6 570 27.4
Duzib084G0166 Durio zibethinus HOM05D006657 ORTHO05D005964 4.5e-27 127.1 526 25.7
Duzib068G0081 Durio zibethinus HOM05D006657 ORTHO05D005964 3.8e-26 124.0 534 27.5
RcHm_v2.0_Chr1g0383041 Rosa chinensis HOM05D006657 ORTHO05D005964 8.4e-26 122.9 436 29.8
FvH4_7g33030 Fragaria vesca HOM05D006657 ORTHO05D005964 1.9e-25 121.7 503 28.6
FAN03G1526 Fragaria x ananassa HOM05D006657 ORTHO05D005964 5.5e-25 120.2 508 28.3
FAN10G1617 Fragaria x ananassa HOM05D006657 ORTHO05D005964 9.3e-25 119.4 491 29.1
DCAR_020382 Daucus carota HOM05D006657 ORTHO05D005964 2.3e-23 114.8 514 25.9
FAN10G2847 Fragaria x ananassa HOM05D006657 ORTHO05D005964 3.9e-23 114.0 504 28.0
Sabra15G0002400 Salix brachista HOM05D006657 ORTHO05D005964 3.9e-23 114.0 532 26.5
TAR629G2606 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.5e-22 112.1 446 28.5
COL.COLO4_14382 Corchorus olitorius HOM05D006657 ORTHO05D005964 2.5e-22 111.3 520 23.3
Lj1A1029T62 Lonicera japonica HOM05D006657 ORTHO05D005964 2.5e-22 111.3 243 32.1
MD01G1229500 Malus domestica HOM05D006657 ORTHO05D005964 1.3e-21 109.0 512 27.9
Potri.012G007000 Populus trichocarpa HOM05D006657 ORTHO05D005964 1.1e-20 105.9 524 25.4
TWI23G1261 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 4.0e-20 104.0 534 26.6
Prupe.2G320100 Prunus persica HOM05D006657 ORTHO05D005964 1.2e-19 102.4 515 27.4
MD07G1301500 Malus domestica HOM05D006657 ORTHO05D005964 5.5e-17 93.6 505 25.7
Cpa.g.sc3.164 Carica papaya HOM05D006657 ORTHO05D005964 1.0e-15 89.4 380 26.1
TWI14G0251 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 2.3e-15 88.2 545 25.1
Gorai.004G125800 Gossypium raimondii HOM05D006657 ORTHO05D005964 1.6e-13 82.0 541 24.8
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea HOM05D006657 ORTHO05D005964 2.8e-13 81.3 365 26.3
CsaV3_4G008600 Cucumis sativus L. HOM05D006657 ORTHO05D005964 6.3e-13 80.1 482 24.9
Gohir.A08G105800 Gossypium hirsutum HOM05D006657 ORTHO05D005964 3.1e-12 77.8 537 24.8
Sed0019147 Sechium edule HOM05D006657 ORTHO05D005964 3.1e-12 77.8 435 25.1
Gohir.D08G117100 Gossypium hirsutum HOM05D006657 ORTHO05D005964 2.0e-11 75.1 533 24.0
Ca_16789_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 2.6e-11 74.7 527 24.1
Ca_16805_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 2.6e-11 74.7 527 24.1
Medtr3g093000 Medicago truncatula HOM05D006657 ORTHO05D005964 4.5e-11 73.9 520 23.5
Lalb_Chr23g0272001 Lupinus albus HOM05D006657 ORTHO05D005964 7.6e-11 73.2 390 24.6
CANSAT21G0900 Cannabis sativa HOM05D006657 ORTHO05D005964 1.0e-10 72.8 543 24.3
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 1.7e-10 72.0 365 25.5
TPR.G33400 Trifolium pratense HOM05D006657 ORTHO05D005964 2.2e-10 71.6 301 26.6
Psat5g071280 Pisum sativum HOM05D006657 ORTHO05D005964 2.9e-10 71.2 331 29.0
QL02p027097 Quercus lobata HOM05D013249 ORTHO05D011012 1.9e-09 68.6 500 23.0
Lalb_Chr11g0067471 Lupinus albus HOM05D006657 ORTHO05D005964 3.2e-09 67.8 430 23.0
Glyma.06G138000 Glycine max HOM05D006657 ORTHO05D005964 2.1e-08 65.1 377 26.5
MBI12_g20086_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 2.1e-08 65.1 299 24.7
PGR042G1854 Punica granatum HOM05D006657 ORTHO05D005964 2.1e-08 65.1 559 24.9
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 3.5e-08 64.3 522 22.8
CDE02G0079 Ceratophyllum demersum HOM05D006657 ORTHO05D005964 7.9e-08 63.2 522 23.0
Lsat_1_v5_gn_2_134840 Lactuca sativa HOM05D006657 ORTHO05D005964 1.8e-07 62.0 185 28.1
CDE04G2546 Ceratophyllum demersum HOM05D006657 ORTHO05D005964 2.3e-07 61.6 342 24.9
Glyma.04G227100 Glycine max HOM05D006657 ORTHO05D005964 1.1e-06 59.3 378 25.1
MBI04_g37612_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 1.9e-06 58.5 280 25.7
AUR62005972 Chenopodium quinoa HOM05D006657 ORTHO05D005964 5.7e-06 57.0 423 24.6
MBI04_g41177_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 5.7e-06 57.0 280 25.7
Sabra16G0305400 Salix brachista HOM05D011672 ORTHO05D011012 5.7e-06 57.0 317 25.2
Lj1g0002697 Lotus japonicus HOM05D006657 ORTHO05D005964 7.4e-06 56.6 337 25.5
Potri.001G452300 Populus trichocarpa HOM05D011672 ORTHO05D011012 7.4e-06 56.6 321 23.7


User provided reference genes

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