Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029299.1 Olea europaea HOM05D001214 ORTHO05D001029 2.4e-37 158.3 77 100.0
Oeu042779.1 Olea europaea HOM05D001214 ORTHO05D001029 1.1e-13 79.7 52 73.1
Oeu008547.1 Olea europaea HOM05D001214 ORTHO05D001029 1.9e-10 68.9 53 67.9
Lj2A765T11 Lonicera japonica HOM05D001214 ORTHO05D001029 3.0e-08 61.6 49 55.1
Ah.07g204010 Amaranthus hybridus HOM05D001214 ORTHO05D001029 5.1e-08 60.8 52 53.8
Hma1.2p1_0511F.1_g169140 Hydrangea macrophylla HOM05D001214 ORTHO05D001029 5.1e-08 60.8 52 59.6
Actinidia00084 Actinidia chinensis HOM05D001214 ORTHO05D001029 8.8e-08 60.1 52 55.8
Dinv38377 Davidia involucrata HOM05D001214 ORTHO05D001029 1.1e-07 59.7 52 55.8
Aa31LG8G10040 Aethionema arabicum HOM05D001214 ORTHO05D001029 1.5e-07 59.3 52 55.8
Lj2A765T10 Lonicera japonica HOM05D001214 ORTHO05D001029 1.5e-07 59.3 49 53.1
Hma1.2p1_0511F.1_g169130 Hydrangea macrophylla HOM05D001214 ORTHO05D001029 2.6e-07 58.5 52 55.8
C07p13650 Brassica napus HOM05D001214 ORTHO05D001029 3.3e-07 58.2 60 51.7
Dinv44474 Davidia involucrata HOM05D001214 ORTHO05D001029 3.3e-07 58.2 52 57.7
Ah.07g204040 Amaranthus hybridus HOM05D001214 ORTHO05D001029 4.4e-07 57.8 47 51.1
ATR0626G380 Amborella trichopoda HOM05D001214 ORTHO05D001029 4.4e-07 57.8 46 56.5
Eucgr.H03614 Eucalyptus grandis HOM05D001214 ORTHO05D001029 4.4e-07 57.8 52 55.8
AUR62002638 Chenopodium quinoa HOM05D001214 ORTHO05D001029 5.7e-07 57.4 52 51.9
Sc13g0003870 Simmondsia chinensis HOM05D001214 ORTHO05D001029 5.7e-07 57.4 47 51.1
Thecc.04G220300 Theobroma cacao HOM05D001214 ORTHO05D001029 7.4e-07 57.0 52 53.8
Peaxi162Scf00095g00921 Petunia axillaris HOM05D001214 ORTHO05D001029 9.7e-07 56.6 46 47.8
BcaC06g35543 Brassica carinata HOM05D001214 ORTHO05D001029 1.3e-06 56.2 52 53.8
BolC7t41860H Brassica oleracea HOM05D001214 ORTHO05D001029 1.3e-06 56.2 52 53.8
BraA07t28671Z Brassica rapa HOM05D001214 ORTHO05D001029 1.3e-06 56.2 52 53.8
PSO210G7415 Papaver somniferum HOM05D001214 ORTHO05D001029 1.3e-06 56.2 52 50.0
MD13G1181800 Malus domestica HOM05D001214 ORTHO05D001029 1.7e-06 55.8 52 51.9
PSO223G0073 Papaver somniferum HOM05D000052 ORTHO05D000046 1.7e-06 55.8 52 51.9
PSO478G3529 Papaver somniferum HOM05D001214 ORTHO05D001029 1.7e-06 55.8 47 57.4
PSO832G2910 Papaver somniferum HOM05D001214 ORTHO05D001029 1.7e-06 55.8 47 51.1
Peaxi162Scf00095g00920 Petunia axillaris HOM05D001214 ORTHO05D001029 1.7e-06 55.8 53 54.7
Aqoxy5G00538 Aquilegia oxysepala HOM05D001214 ORTHO05D001029 2.2e-06 55.5 52 53.8
Lj3A760T34 Lonicera japonica HOM05D001214 ORTHO05D001029 2.2e-06 55.5 46 56.5
Lj3C760G9 Lonicera japonica HOM05D001214 ORTHO05D001029 2.2e-06 55.5 46 56.5
RcHm_v2.0_Chr4g0418591 Rosa chinensis HOM05D001214 ORTHO05D001029 2.2e-06 55.5 54 48.1
TWI53G0482 Tripterygium wilfordii HOM05D001214 ORTHO05D001029 2.2e-06 55.5 47 53.2
A07p08800 Brassica napus HOM05D001214 ORTHO05D001029 2.8e-06 55.1 66 47.0
Cc00_g16390 Coffea canephora HOM05D001214 ORTHO05D001029 2.8e-06 55.1 52 51.9
PSO210G7171 Papaver somniferum HOM05D001214 ORTHO05D001029 2.8e-06 55.1 47 51.1
BcaB06g26515 Brassica carinata HOM05D001214 ORTHO05D001029 3.7e-06 54.7 52 53.8
CSS0004711 Camellia sinensis var. sinensis HOM05D001214 ORTHO05D001029 3.7e-06 54.7 52 55.8
Thhalv10021427m.g Eutrema salsugineum HOM05D001214 ORTHO05D001029 3.7e-06 54.7 52 50.0
Hund12208 Selenicereus undatus HOM05D001214 ORTHO05D001029 3.7e-06 54.7 52 50.0
THA.LOC104804767 Tarenaya hassleriana HOM05D001214 ORTHO05D001029 3.7e-06 54.7 48 52.1
AL3G38270 Arabidopsis lyrata HOM05D001214 ORTHO05D001029 4.8e-06 54.3 52 51.9
Cfa015565 Carpinus fangiana HOM05D001214 ORTHO05D001029 4.8e-06 54.3 52 51.9
Ciclev10006579m.g Citrus clementina HOM05D001214 ORTHO05D001029 4.8e-06 54.3 52 51.9
Sp3g21270 Schrenkiella parvula HOM05D001214 ORTHO05D001029 4.8e-06 54.3 52 50.0
GSVIVG01017876001 Vitis vinifera HOM05D001214 ORTHO05D001029 4.8e-06 54.3 52 50.0
CiPaw.01G158800 Carya illinoinensis HOM05D001214 ORTHO05D001029 6.3e-06 53.9 52 53.8
Eucgr.B01151 Eucalyptus grandis HOM05D001214 ORTHO05D001029 6.3e-06 53.9 52 50.0
vmacro08266 Vaccinium macrocarpon HOM05D001214 ORTHO05D001029 6.3e-06 53.9 52 50.0
Carub.0003s2381 Capsella rubella HOM05D001214 ORTHO05D001029 8.2e-06 53.5 52 51.9
Carub.0003s2382 Capsella rubella HOM05D001214 ORTHO05D001029 8.2e-06 53.5 46 52.2
Cc03_g03000 Coffea canephora HOM05D001214 ORTHO05D001029 8.2e-06 53.5 52 50.0
Gohir.A02G028400 Gossypium hirsutum HOM05D001214 ORTHO05D001029 8.2e-06 53.5 52 48.1
Gohir.D02G036100 Gossypium hirsutum HOM05D001214 ORTHO05D001029 8.2e-06 53.5 52 48.1
Gorai.005G040200 Gossypium raimondii HOM05D001214 ORTHO05D001029 8.2e-06 53.5 52 48.1
TAR362G0562 Trochodendron aralioides HOM05D001214 ORTHO05D001029 8.2e-06 53.5 57 45.6
GSVIVG01011091001 Vitis vinifera HOM05D001214 ORTHO05D001029 8.2e-06 53.5 52 51.9


User provided reference genes

Program Settings