Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029260.1 Olea europaea HOM05D005803 ORTHO05D008090 1.1e-95 353.6 219 100.0
Hma1.2p1_0698F.1_g205430 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 6.9e-82 307.8 208 79.3
Hma1.2p1_0698F.1_g205440 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 9.0e-82 307.4 207 79.2
Rhsim04G0218200 Rhododendron simsii HOM05D005803 ORTHO05D008090 3.8e-80 302.0 210 87.6
TWI09G0274 Tripterygium wilfordii HOM05D005803 ORTHO05D008090 4.9e-80 301.6 208 78.8
CSS0017376 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 8.4e-80 300.8 208 77.4
CSS0035312 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 8.4e-80 300.8 208 77.4
Nn3g21354 Nelumbo nucifera HOM05D005803 ORTHO05D008090 1.1e-79 300.4 208 76.9
Ciclev10004654m.g Citrus clementina HOM05D005803 ORTHO05D008090 1.4e-79 300.1 208 77.4
Peaxi162Scf00386g00615 Petunia axillaris HOM05D005803 ORTHO05D008090 1.4e-79 300.1 208 82.7
GSVIVG01017783001 Vitis vinifera HOM05D005803 ORTHO05D008090 1.4e-79 300.1 208 76.4
ClCG06G005310 Citrullus lanatus HOM05D005803 ORTHO05D008090 2.4e-79 299.3 208 76.9
Cc03_g02160 Coffea canephora HOM05D005803 ORTHO05D008090 3.2e-79 298.9 208 89.9
Sopen01g029400 Solanum pennellii HOM05D005803 ORTHO05D008090 4.2e-79 298.5 208 76.0
CsaV3_6G017350 Cucumis sativus L. HOM05D005803 ORTHO05D008090 5.4e-79 298.1 208 76.4
MSTRG.3937 Avicennia marina HOM05D005803 ORTHO05D008090 9.3e-79 297.4 208 89.9
Actinidia40241 Actinidia chinensis HOM05D005803 ORTHO05D008090 1.2e-78 297.0 208 87.5
RcHm_v2.0_Chr4g0421441 Rosa chinensis HOM05D005803 ORTHO05D008090 2.1e-78 296.2 208 76.4
Dinv44408 Davidia involucrata HOM05D005803 ORTHO05D008090 6.0e-78 294.7 208 89.4
Potri.008G215100 Populus trichocarpa HOM05D005803 ORTHO05D008090 6.0e-78 294.7 208 76.4
Ah.13g074480 Amaranthus hybridus HOM05D005803 ORTHO05D008090 7.9e-78 294.3 214 73.8
Nitab4.5_0000829g0230 Nicotiana tabacum HOM05D005803 ORTHO05D008090 1.7e-77 293.1 207 79.2
Potri.010G022100 Populus trichocarpa HOM05D005803 ORTHO05D008090 2.3e-77 292.7 212 73.6
Nitab4.5_0000644g0090 Nicotiana tabacum HOM05D005803 ORTHO05D008090 3.0e-77 292.4 208 78.8
EL10Ac3g06553 Beta vulgaris HOM05D005803 ORTHO05D008090 3.9e-77 292.0 208 75.5
CiPaw.01G151500 Carya illinoinensis HOM05D005803 ORTHO05D008090 3.9e-77 292.0 208 75.0
MD16G1173300 Malus domestica HOM05D005803 ORTHO05D008090 3.9e-77 292.0 209 77.0
Sabra08G0155700 Salix brachista HOM05D005803 ORTHO05D008090 5.1e-77 291.6 208 75.5
Cpa.g.sc1214.2 Carica papaya HOM05D005803 ORTHO05D008090 5.6e-76 288.1 208 74.0
Haze_01246 Corylus avellana HOM05D005803 ORTHO05D008090 5.6e-76 288.1 208 74.5
Thecc.04G279700 Theobroma cacao HOM05D005803 ORTHO05D008090 5.6e-76 288.1 208 74.5
Prupe.1G140200 Prunus persica HOM05D005803 ORTHO05D008090 9.6e-76 287.3 208 75.5
PGR031G1735 Punica granatum HOM05D005803 ORTHO05D008090 9.6e-76 287.3 210 74.3
CANSAT78G2259 Cannabis sativa HOM05D005803 ORTHO05D008090 1.3e-75 287.0 208 73.6
Cfa015360 Carpinus fangiana HOM05D005803 ORTHO05D008090 1.3e-75 287.0 208 74.5
Lalb_Chr18g0055621 Lupinus albus HOM05D005803 ORTHO05D008090 1.6e-75 286.6 208 73.1
SGA_v2.0_scaffold57G20231 Striga asiatica HOM05D005803 ORTHO05D008090 1.6e-75 286.6 252 65.5
MD13G1171800 Malus domestica HOM05D005803 ORTHO05D008090 2.1e-75 286.2 209 75.6
Gohir.A10G161600 Gossypium hirsutum HOM05D005803 ORTHO05D008090 2.4e-74 282.7 208 74.0
Lj6g0003207 Lotus japonicus HOM05D005803 ORTHO05D008090 2.4e-74 282.7 208 74.0
Manes.15G015300 Manihot esculenta HOM05D005803 ORTHO05D008090 2.4e-74 282.7 208 74.5
Aqoxy5G00678 Aquilegia oxysepala HOM05D005803 ORTHO05D008090 2.6e-73 279.3 208 70.2
THA.LOC104820247 Tarenaya hassleriana HOM05D005803 ORTHO05D008090 2.6e-73 279.3 212 70.3
Migut.G00189 Erythranthe guttata HOM05D005803 ORTHO05D008090 5.8e-73 278.1 209 85.2
CAN.G223.20 Capsicum annuum HOM05D005803 ORTHO05D008090 3.8e-72 275.4 208 76.4
Sc19g0005000 Simmondsia chinensis HOM05D005803 ORTHO05D008090 6.4e-72 274.6 211 71.1
HanXRQChr13g0410111 Helianthus annuus HOM05D005803 ORTHO05D008090 8.4e-72 274.2 208 82.2
QL06p007721 Quercus lobata HOM05D005803 ORTHO05D008090 5.5e-71 271.6 209 69.9
Aa31LG5G20510 Aethionema arabicum HOM05D005803 ORTHO05D008090 7.1e-71 271.2 208 69.7
PSO210G1989 Papaver somniferum HOM05D005803 ORTHO05D008090 1.2e-70 270.4 210 81.0
PSO832G0201 Papaver somniferum HOM05D005803 ORTHO05D008090 1.2e-70 270.4 210 81.0
TAR365G0996 Trochodendron aralioides HOM05D005803 ORTHO05D008090 2.7e-70 269.2 188 88.3
Medtr2g019850 Medicago truncatula HOM05D005803 ORTHO05D008090 6.0e-70 268.1 208 78.8
Duzib151G0664 Durio zibethinus HOM05D005803 ORTHO05D008090 7.9e-70 267.7 208 71.6
Gohir.D10G168100 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.0e-69 267.3 212 69.3
Glyma.13G216500 Glycine max HOM05D005803 ORTHO05D008090 1.3e-69 266.9 208 70.7
Glyma.15G096000 Glycine max HOM05D005803 ORTHO05D008090 1.3e-69 266.9 208 70.7
Sed0014775 Sechium edule HOM05D005803 ORTHO05D008090 2.3e-69 266.2 208 70.7
VMungo0540G0998 Vigna mungo HOM05D005803 ORTHO05D008090 2.3e-69 266.2 208 70.2
Gorai.011G187600 Gossypium raimondii HOM05D005803 ORTHO05D008090 3.0e-69 265.8 208 70.2
Lsat_1_v5_gn_5_69681 Lactuca sativa HOM05D005803 ORTHO05D008090 3.0e-69 265.8 210 73.3
Psat1g187960 Pisum sativum HOM05D005803 ORTHO05D008090 3.0e-69 265.8 208 70.2
Ca_00559_v3 Cicer arietinum L. HOM05D005803 ORTHO05D008090 5.1e-69 265.0 208 69.7
DCAR_027096 Daucus carota HOM05D005803 ORTHO05D008090 8.7e-69 264.2 208 70.2
ATR0706G085 Amborella trichopoda HOM05D005803 ORTHO05D008090 1.5e-68 263.5 211 65.9
Eucgr.B01277 Eucalyptus grandis HOM05D005803 ORTHO05D008090 1.5e-68 263.5 208 69.7
TPR.G1478 Trifolium pratense HOM05D005803 ORTHO05D008090 3.3e-68 262.3 208 69.2
Phvul.006G162900 Phaseolus vulgaris HOM05D005803 ORTHO05D008090 4.3e-68 261.9 208 68.3
AUR62042651 Chenopodium quinoa HOM05D005803 ORTHO05D008090 2.1e-67 259.6 186 73.1
AL4G36390 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 2.8e-67 259.2 208 68.3
FAN07G1352 Fragaria x ananassa HOM05D005803 ORTHO05D008090 3.7e-67 258.8 208 69.2
FAN12G0977 Fragaria x ananassa HOM05D005803 ORTHO05D008090 3.7e-67 258.8 208 69.2
FAN12G3070 Fragaria x ananassa HOM05D005803 ORTHO05D008090 3.7e-67 258.8 208 69.2
FAN22G2255 Fragaria x ananassa HOM05D005803 ORTHO05D008090 3.7e-67 258.8 208 69.2
HPP92_015179 Vanilla planifolia HOM05D005803 ORTHO05D008090 3.7e-67 258.8 218 64.2
Carub.0004s2114 Capsella rubella HOM05D005803 ORTHO05D008090 1.1e-66 257.3 208 67.8
Sp4g21440 Schrenkiella parvula HOM05D005803 ORTHO05D008090 1.8e-66 256.5 208 66.8
MELO3C021349.2 Cucumis melo HOM05D005803 ORTHO05D008090 2.4e-66 256.1 233 62.2
BcaB02g09144 Brassica carinata HOM05D005803 ORTHO05D008090 4.0e-66 255.4 208 66.3
BcaC02g12039 Brassica carinata HOM05D005803 ORTHO05D008090 4.0e-66 255.4 208 66.3
A05p07190 Brassica napus HOM05D005803 ORTHO05D008090 4.0e-66 255.4 208 66.3
C04p08600 Brassica napus HOM05D005803 ORTHO05D008090 4.0e-66 255.4 208 66.3
BraA05t19684Z Brassica rapa HOM05D005803 ORTHO05D008090 4.0e-66 255.4 208 66.3
ECA240G4135 Erigeron canadensis HOM05D005803 ORTHO05D008090 4.0e-66 255.4 200 81.5
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 5.3e-66 255.0 207 66.2
Os05g0149900 Oryza sativa ssp. japonica HOM05D005803 ORTHO05D008090 2.6e-65 252.7 208 66.3
AT2G39090 Arabidopsis thaliana HOM05D005803 ORTHO05D008090 1.3e-64 250.4 208 66.3
vmacro22476 Vaccinium macrocarpon HOM05D005803 ORTHO05D008090 1.7e-64 250.0 222 64.9
arahy.Tifrunner.gnm1.ann1.7QB25Q Arachis hypogaea HOM05D005803 ORTHO05D008090 2.9e-64 249.2 208 66.3
arahy.Tifrunner.gnm1.ann1.FSUI8I Arachis hypogaea HOM05D005803 ORTHO05D008090 2.9e-64 249.2 208 66.3
CARHR133850 Cardamine hirsuta HOM05D005803 ORTHO05D008090 1.4e-63 246.9 208 64.9
unitig_26.g9058 Utricularia gibba HOM05D005803 ORTHO05D008090 9.3e-63 244.2 212 64.2
AUR62043505 Chenopodium quinoa HOM05D005803 ORTHO05D008090 1.2e-62 243.8 208 67.3
MBI19_g01944_MAGBIO Magnolia biondii HOM05D005803 ORTHO05D008090 1.2e-62 243.8 183 78.1
SMO119G0467 Selaginella moellendorffii HOM05D005803 ORTHO05D008090 5.7e-60 235.0 212 70.8
Thhalv10017916m.g Eutrema salsugineum HOM05D005803 ORTHO05D008090 1.1e-58 230.7 179 69.3
Lj6C671G13 Lonicera japonica HOM05D005803 ORTHO05D008090 6.5e-56 221.5 160 73.1
Mapoly0073s0077 Marchantia polymorpha HOM05D005803 ORTHO05D008090 1.1e-55 220.7 218 56.9
CDE06G0920 Ceratophyllum demersum HOM05D005803 ORTHO05D008090 2.1e-54 216.5 213 58.7
COL.COLO4_13910 Corchorus olitorius HOM05D005803 ORTHO05D008090 1.0e-53 214.2 159 71.1
Pp3c23_6980 Physcomitrium patens HOM05D005803 ORTHO05D008090 1.8e-53 213.4 213 55.4
Atru.chr4.2785 Acer truncatum HOM05D005803 ORTHO05D008090 3.9e-53 212.2 161 69.6
FvH4_4g17530 Fragaria vesca HOM05D005803 ORTHO05D008090 7.4e-52 208.0 159 68.6
AagrBONN_evm.TU.Sc2ySwM_228.1968 Anthoceros agrestis HOM05D005803 ORTHO05D008090 9.1e-50 201.1 212 53.3
CBR_g37168 Chara braunii HOM05D005803 ORTHO05D000048 2.1e-46 189.9 206 51.9
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 1.1e-36 157.5 141 61.0
C06p17250 Brassica napus HOM05D005803 ORTHO05D020090 1.4e-29 134.0 157 52.2
BolC6t36924H Brassica oleracea HOM05D005803 ORTHO05D020090 1.4e-29 134.0 157 52.2
BcaC07g41552 Brassica carinata HOM05D000238 ORTHO05D020090 3.1e-26 122.9 71 84.5
BcaC09g48072 Brassica carinata HOM05D005803 ORTHO05D020090 1.2e-25 120.9 71 83.1
C04p44010 Brassica napus HOM05D005803 ORTHO05D020090 7.7e-25 118.2 157 45.9
MCO16G459 Micromonas commoda HOM05D005803 ORTHO05D008090 5.0e-24 115.5 200 35.5
SEGI_25333 Sequoiadendron giganteum HOM05D005803 ORTHO05D020090 5.5e-23 112.1 77 68.8
BcaC08g44302 Brassica carinata HOM05D005803 ORTHO05D020090 3.0e-21 106.3 58 89.7
Hma1.2p1_2251F.1_g318140 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 3.3e-07 59.7 33 81.8
SEGI_03047 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 4.7e-06 55.8 47 68.1


User provided reference genes

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