Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029114.1 Olea europaea HOM05D007382 ORTHO05D009012 1.3e-91 339.7 174 100.0
Migut.J00393 Erythranthe guttata HOM05D007382 ORTHO05D009012 2.5e-50 202.6 166 63.9
MSTRG.19120 Avicennia marina HOM05D007382 ORTHO05D009012 4.7e-49 198.4 143 65.7
Nitab4.5_0007103g0020 Nicotiana tabacum HOM05D007382 ORTHO05D009012 1.5e-47 193.4 155 63.2
Hma1.2p1_0111F.1_g053520 Hydrangea macrophylla HOM05D007382 ORTHO05D009012 2.0e-47 193.0 157 62.4
Nitab4.5_0000202g0370 Nicotiana tabacum HOM05D007382 ORTHO05D009012 2.6e-47 192.6 155 62.6
Dinv37282 Davidia involucrata HOM05D007382 ORTHO05D009012 1.1e-45 187.2 154 64.3
Hma1.2p1_0111F.1_g053480 Hydrangea macrophylla HOM05D007382 ORTHO05D009012 5.3e-45 184.9 165 60.0
CSS0017861 Camellia sinensis var. sinensis HOM05D007382 ORTHO05D009012 1.0e-43 180.6 148 61.5
CAN.G435.4 Capsicum annuum HOM05D007382 ORTHO05D009012 3.8e-43 178.7 139 63.3
Peaxi162Scf00472g00081 Petunia axillaris HOM05D007382 ORTHO05D009012 3.8e-43 178.7 156 59.6
HanXRQChr07g0195861 Helianthus annuus HOM05D007382 ORTHO05D009012 1.9e-42 176.4 145 61.4
SGA_v2.0_scaffold126G33863 Striga asiatica HOM05D007382 ORTHO05D009012 3.2e-42 175.6 163 55.8
GSVIVG01025574001 Vitis vinifera HOM05D002855 ORTHO05D009676 1.2e-41 173.7 158 56.3
TAR369G0081 Trochodendron aralioides HOM05D007382 ORTHO05D009012 2.1e-41 172.9 170 55.9
Potri.006G216000 Populus trichocarpa HOM05D007382 ORTHO05D009012 4.7e-41 171.8 165 57.6
Prupe.6G245200 Prunus persica HOM05D007382 ORTHO05D009012 1.0e-40 170.6 169 53.3
QL07p045887 Quercus lobata HOM05D007382 ORTHO05D009012 1.0e-40 170.6 141 60.3
CiPaw.10G139200 Carya illinoinensis HOM05D007382 ORTHO05D009012 1.4e-40 170.2 166 56.6
Ciclev10012925m.g Citrus clementina HOM05D007382 ORTHO05D009012 1.4e-40 170.2 140 62.1
Sabra06G0166500 Salix brachista HOM05D007382 ORTHO05D009012 2.3e-40 169.5 166 58.4
Haze_20685 Corylus avellana HOM05D007382 ORTHO05D009012 6.7e-40 167.9 171 55.0
HanXRQChr10g0297271 Helianthus annuus HOM05D007382 ORTHO05D009012 1.2e-39 167.2 143 58.7
Nn2g10574 Nelumbo nucifera HOM05D007382 ORTHO05D009012 1.2e-39 167.2 161 54.7
Nn3g20330 Nelumbo nucifera HOM05D007382 ORTHO05D009012 2.0e-39 166.4 131 61.1
Lsat_1_v5_gn_2_111101 Lactuca sativa HOM05D007382 ORTHO05D009012 2.6e-39 166.0 145 59.3
Cfa017470 Carpinus fangiana HOM05D007382 ORTHO05D009012 3.3e-39 165.6 169 55.0
Lsat_1_v5_gn_2_110741 Lactuca sativa HOM05D007382 ORTHO05D009012 7.5e-39 164.5 145 58.6
Sopen10g033880 Solanum pennellii HOM05D007382 ORTHO05D009012 1.3e-38 163.7 153 57.5
CANSAT80G2903 Cannabis sativa HOM05D007382 ORTHO05D009012 2.8e-38 162.5 130 60.8
Sc01g0003740 Simmondsia chinensis HOM05D007382 ORTHO05D009012 1.4e-37 160.2 164 54.3
Duzib093G1372 Durio zibethinus HOM05D007382 ORTHO05D009012 2.4e-37 159.5 123 62.6
PGSC0003DMG401010988 Solanum tuberosum HOM05D007382 ORTHO05D009012 2.4e-37 159.5 153 56.2
AUR62042292 Chenopodium quinoa HOM05D002855 ORTHO05D009012 3.1e-37 159.1 149 57.0
Cc06_g15490 Coffea canephora HOM05D007382 ORTHO05D009012 3.1e-37 159.1 140 56.4
COL.COLO4_10307 Corchorus olitorius HOM05D007382 ORTHO05D009012 7.0e-37 157.9 141 58.2
MD12G1130200 Malus domestica HOM05D007382 ORTHO05D009012 1.2e-36 157.1 169 50.3
ECA238G1385 Erigeron canadensis HOM05D007382 ORTHO05D009012 1.6e-36 156.8 142 56.3
Manes.09G071800 Manihot esculenta HOM05D007382 ORTHO05D009012 1.6e-36 156.8 181 49.7
Lsat_1_v5_gn_2_110841 Lactuca sativa HOM05D007382 ORTHO05D009012 2.0e-36 156.4 145 55.9
Solyc10g084440.3 Solanum lycopersicum HOM05D007382 ORTHO05D009012 2.0e-36 156.4 153 55.6
MBI04_g28758_MAGBIO Magnolia biondii HOM05D007382 ORTHO05D009012 2.7e-36 156.0 152 55.9
MBI04_g38440_MAGBIO Magnolia biondii HOM05D007382 ORTHO05D009012 3.5e-36 155.6 152 55.9
PGSC0003DMG400038088 Solanum tuberosum HOM05D007382 ORTHO05D009012 5.9e-36 154.8 132 58.3
Eucgr.A01209 Eucalyptus grandis HOM05D007382 ORTHO05D009012 1.7e-35 153.3 155 52.3
Gohir.D04G117000 Gossypium hirsutum HOM05D007382 ORTHO05D009012 2.9e-35 152.5 149 55.0
Gorai.009G421900 Gossypium raimondii HOM05D007382 ORTHO05D009012 2.9e-35 152.5 149 55.0
MELO3C003080.2 Cucumis melo HOM05D007382 ORTHO05D009012 8.5e-35 151.0 165 50.3
AUR62036838 Chenopodium quinoa HOM05D007382 ORTHO05D009012 1.1e-34 150.6 170 51.2
Gohir.A04G077800 Gossypium hirsutum HOM05D007382 ORTHO05D009012 1.1e-34 150.6 149 55.0
PSO384G2862 Papaver somniferum HOM05D007382 ORTHO05D009012 1.1e-34 150.6 201 47.3
Thecc.05G050100 Theobroma cacao HOM05D007382 ORTHO05D009012 1.1e-34 150.6 155 51.6
EL10Ac7g17270 Beta vulgaris HOM05D007382 ORTHO05D009012 1.5e-34 150.2 176 50.0
CsaV3_4G024470 Cucumis sativus L. HOM05D007382 ORTHO05D009012 1.9e-34 149.8 164 50.6
FAN05G3594 Fragaria x ananassa HOM05D007382 ORTHO05D009012 1.9e-34 149.8 162 53.7
PGSC0003DMG400037466 Solanum tuberosum HOM05D007382 ORTHO05D009012 1.6e-33 146.7 132 56.1
Glyma.03G175900 Glycine max HOM05D007382 ORTHO05D009012 2.1e-33 146.4 148 49.3
Sed0019756 Sechium edule HOM05D007382 ORTHO05D009012 2.1e-33 146.4 145 49.7
Sopen07g005520 Solanum pennellii HOM05D007382 ORTHO05D009012 2.7e-33 146.0 121 59.5
Solyc07g014660.3 Solanum lycopersicum HOM05D007382 ORTHO05D009012 4.7e-33 145.2 124 58.1
FvH4_6g14870 Fragaria vesca HOM05D007382 ORTHO05D009012 1.4e-32 143.7 153 52.9
FAN09G0189 Fragaria x ananassa HOM05D007382 ORTHO05D009012 1.4e-32 143.7 153 52.9
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.4e-32 143.7 153 52.9
FAN14G4413 Fragaria x ananassa HOM05D002855 ORTHO05D009012 1.4e-32 143.7 153 52.9
Glyma.19G176400 Glycine max HOM05D007382 ORTHO05D009012 5.2e-32 141.7 139 52.5
Sopen09g026050 Solanum pennellii HOM05D007382 ORTHO05D009012 8.8e-32 141.0 133 54.9
TWI77G0838 Tripterygium wilfordii HOM05D007382 ORTHO05D009012 8.8e-32 141.0 126 57.1
Sed0025265 Sechium edule HOM05D007382 ORTHO05D009012 1.2e-31 140.6 145 49.7
Hund10951 Selenicereus undatus HOM05D007382 ORTHO05D009012 1.2e-31 140.6 177 44.1
Ah.08g212080 Amaranthus hybridus HOM05D007382 ORTHO05D009012 3.4e-31 139.0 176 46.6
AL5G39780 Arabidopsis lyrata HOM05D007382 ORTHO05D009012 3.4e-31 139.0 134 50.7
Ca_08808_v3 Cicer arietinum L. HOM05D007382 ORTHO05D009012 3.4e-31 139.0 148 48.6
ClCG04G008690 Citrullus lanatus HOM05D007382 ORTHO05D009012 3.4e-31 139.0 165 46.7
RcHm_v2.0_Chr3g0468081 Rosa chinensis HOM05D007382 ORTHO05D009012 4.4e-31 138.7 153 51.0
Carub.0005s2494 Capsella rubella HOM05D007382 ORTHO05D009012 7.5e-31 137.9 119 54.6
Sp5g04630 Schrenkiella parvula HOM05D007382 ORTHO05D009012 1.3e-30 137.1 120 52.5
Aa31LG10G12820 Aethionema arabicum HOM05D007382 ORTHO05D009012 3.7e-30 135.6 151 45.7
Medtr7g100230 Medicago truncatula HOM05D007382 ORTHO05D009012 2.4e-29 132.9 145 47.6
Phvul.001G173000 Phaseolus vulgaris HOM05D007382 ORTHO05D009012 5.4e-29 131.7 137 48.9
Medtr7g100200 Medicago truncatula HOM05D007382 ORTHO05D009012 9.1e-29 131.0 144 50.7
BcaC02g09988 Brassica carinata HOM05D007382 ORTHO05D009012 1.6e-28 130.2 133 46.6
BcaB02g08277 Brassica carinata HOM05D007382 ORTHO05D009012 2.0e-28 129.8 120 50.8
Lj1g0005181 Lotus japonicus HOM05D007382 ORTHO05D009012 2.0e-28 129.8 130 52.3
VMungo1383G3160 Vigna mungo HOM05D007382 ORTHO05D009012 2.0e-28 129.8 136 48.5
CARHR168440 Cardamine hirsuta HOM05D007382 ORTHO05D009012 2.7e-28 129.4 108 56.5
Psat7g058560 Pisum sativum HOM05D007382 ORTHO05D009012 2.7e-28 129.4 140 45.7
unitig_744.g24666 Utricularia gibba HOM05D007382 ORTHO05D009012 1.0e-27 127.5 153 46.4
TPR.G21464 Trifolium pratense HOM05D007382 ORTHO05D009012 1.7e-27 126.7 168 45.2
Aqoxy5G00351 Aquilegia oxysepala HOM05D007382 ORTHO05D009012 2.9e-27 125.9 152 46.1
ATR0709G053 Amborella trichopoda HOM05D007382 ORTHO05D009012 1.1e-26 124.0 167 46.1
AT3G58090 Arabidopsis thaliana HOM05D000180 ORTHO05D000099 1.9e-26 123.2 106 55.7
CDE05G2022 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 2.5e-26 122.9 129 48.8
Zm00001eb148770 Zea mays HOM05D007382 ORTHO05D009012 7.2e-26 121.3 150 46.7
PGSC0003DMG400035622 Solanum tuberosum HOM05D007382 ORTHO05D009012 4.7e-25 118.6 121 47.9
CiPaw.15G123900 Carya illinoinensis HOM05D007382 ORTHO05D009012 3.0e-24 115.9 147 47.6
BolC4t24990H Brassica oleracea HOM05D000180 ORTHO05D000099 1.2e-23 114.0 116 48.3
C04p34300 Brassica napus HOM05D000180 ORTHO05D000099 2.6e-23 112.8 116 48.3
HPP92_019795 Vanilla planifolia HOM05D007382 ORTHO05D009012 3.4e-23 112.5 113 51.3
A04p02730 Brassica napus HOM05D000180 ORTHO05D000099 7.5e-23 111.3 102 52.0
BraA04t15999Z Brassica rapa HOM05D000180 ORTHO05D000099 7.5e-23 111.3 102 52.0
AUR62043938 Chenopodium quinoa HOM05D002855 ORTHO05D004406 9.8e-23 110.9 139 46.0
Os01g0835600 Oryza sativa ssp. japonica HOM05D007382 ORTHO05D009012 1.3e-22 110.5 113 48.7
SEGI_34495 Sequoiadendron giganteum HOM05D007382 ORTHO05D009012 3.5e-20 102.4 175 39.4
VMungo1080G1211 Vigna mungo HOM05D007382 ORTHO05D009012 7.8e-20 101.3 78 56.4
Lalb_Chr20g0113021 Lupinus albus HOM05D007382 ORTHO05D009012 1.0e-16 90.9 91 49.5
CDE09G1151 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 2.3e-16 89.7 136 41.2
Lalb_Chr25g0289341 Lupinus albus HOM05D007382 ORTHO05D009012 5.8e-15 85.1 86 50.0
CDE12G0689 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 9.2e-13 77.8 93 45.2
SEGI_03776 Sequoiadendron giganteum HOM05D016889 ORTHO05D009012 8.6e-11 71.2 105 40.0
ATR0665G317 Amborella trichopoda HOM05D007382 ORTHO05D009012 1.4e-08 63.9 52 55.8
SMO147G0006 Selaginella moellendorffii HOM05D016889 ORTHO05D026570 1.4e-08 63.9 132 34.1
ATR0829G079 Amborella trichopoda HOM05D016889 ORTHO05D026570 3.1e-08 62.8 56 50.0
CBR_g41746 Chara braunii HOM05D007382 ORTHO05D009012 1.2e-07 60.8 81 38.3
Pp3c14_21840 Physcomitrium patens HOM05D016889 ORTHO05D009012 4.4e-07 58.9 142 30.3
Duzib168G2332 Durio zibethinus HOM05D001312 ORTHO05D001832 3.7e-06 55.8 51 56.9


User provided reference genes

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