Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029101.1 Olea europaea HOM05D000065 ORTHO05D290982 7.3e-29 129.8 62 100.0
Oeu032070.1 Olea europaea HOM05D006479 ORTHO05D008310 8.6e-22 106.3 52 98.1
Migut.D00711 Erythranthe guttata HOM05D006479 ORTHO05D008310 1.1e-13 79.3 52 65.4
ECA247G3581 Erigeron canadensis HOM05D000339 ORTHO05D010107 3.6e-12 74.3 50 64.0
Peaxi162Scf00978g00119 Petunia axillaris HOM05D000065 ORTHO05D010107 4.0e-11 70.9 52 57.7
Ciclev10014249m.g Citrus clementina HOM05D006479 ORTHO05D008310 5.2e-11 70.5 48 60.4
Nitab4.5_0008289g0030 Nicotiana tabacum HOM05D000065 ORTHO05D010107 8.9e-11 69.7 52 57.7
Atru.chr3.2920 Acer truncatum HOM05D000065 ORTHO05D010107 2.0e-10 68.6 51 62.7
Solyc11g072040.2 Solanum lycopersicum HOM05D000065 ORTHO05D010107 2.0e-10 68.6 52 57.7
Sopen11g029690 Solanum pennellii HOM05D000065 ORTHO05D010107 2.0e-10 68.6 52 57.7
PGSC0003DMG400027399 Solanum tuberosum HOM05D000065 ORTHO05D010107 2.0e-10 68.6 52 57.7
Nitab4.5_0002567g0060 Nicotiana tabacum HOM05D000065 ORTHO05D010107 5.8e-10 67.0 52 55.8
PGR119G1636 Punica granatum HOM05D000065 ORTHO05D010107 9.8e-10 66.2 49 59.2
GSVIVG01037436001 Vitis vinifera HOM05D006479 ORTHO05D008310 1.3e-09 65.9 48 58.3
HanXRQChr08g0230581 Helianthus annuus HOM05D000065 ORTHO05D010107 2.9e-09 64.7 50 56.0
Lalb_Chr10g0105881 Lupinus albus HOM05D000065 ORTHO05D010107 2.9e-09 64.7 49 57.1
QL01p020445 Quercus lobata HOM05D000065 ORTHO05D010107 2.9e-09 64.7 51 54.9
Lsat_1_v5_gn_9_21260 Lactuca sativa HOM05D000065 ORTHO05D010107 3.7e-09 64.3 51 51.0
SGA_v2.0_scaffold79G25621 Striga asiatica HOM05D000079 ORTHO05D009750 3.7e-09 64.3 51 52.9
TWI79G0313 Tripterygium wilfordii HOM05D000065 ORTHO05D010107 3.7e-09 64.3 51 54.9
SalBow6G2124 Salvia bowleyana HOM05D000065 ORTHO05D010107 4.9e-09 63.9 58 48.3
Medtr5g087690 Medicago truncatula HOM05D000065 ORTHO05D010107 6.4e-09 63.5 47 59.6
Psat2g022960 Pisum sativum HOM05D000065 ORTHO05D010107 6.4e-09 63.5 47 57.4
Prupe.6G152900 Prunus persica HOM05D000065 ORTHO05D010107 1.1e-08 62.8 50 54.0
CAN.G280.15 Capsicum annuum HOM05D000065 ORTHO05D010107 1.4e-08 62.4 47 59.6
Dinv32104 Davidia involucrata HOM05D003022 ORTHO05D003363 1.9e-08 62.0 49 55.1
Cpa.g.sc103.79 Carica papaya HOM05D000065 ORTHO05D010107 4.1e-08 60.8 50 54.0
Manes.04G055600 Manihot esculenta HOM05D000065 ORTHO05D010107 4.1e-08 60.8 51 52.9
Potri.009G157800 Populus trichocarpa HOM05D000065 ORTHO05D010107 4.1e-08 60.8 51 54.9
TPR.G11681 Trifolium pratense HOM05D000065 ORTHO05D010107 5.4e-08 60.5 47 57.4
Lj2C906G3 Lonicera japonica HOM05D000065 ORTHO05D010107 7.1e-08 60.1 49 59.2
Glyma.02G273900 Glycine max HOM05D000065 ORTHO05D010107 9.2e-08 59.7 49 53.1
FAN06G5102 Fragaria x ananassa HOM05D000065 ORTHO05D010107 1.2e-07 59.3 48 52.1
TAR636G1998 Trochodendron aralioides HOM05D000065 ORTHO05D010107 1.6e-07 58.9 49 51.0
Aqoxy1G00135 Aquilegia oxysepala HOM05D000065 ORTHO05D010107 2.1e-07 58.5 49 49.0
Ca_06149_v3 Cicer arietinum L. HOM05D006479 ORTHO05D008310 2.7e-07 58.2 47 53.2
CsaV3_4G017390 Cucumis sativus L. HOM05D000065 ORTHO05D010107 2.7e-07 58.2 48 50.0
LjContig00564g0021350 Lotus japonicus HOM05D000065 ORTHO05D010107 2.7e-07 58.2 48 52.1
FAN01G2852 Fragaria x ananassa HOM05D000065 ORTHO05D010107 3.5e-07 57.8 48 50.0
FAN06G4200 Fragaria x ananassa HOM05D000065 ORTHO05D010107 3.5e-07 57.8 48 50.0
FAN10G3785 Fragaria x ananassa HOM05D000065 ORTHO05D010107 3.5e-07 57.8 48 50.0
MD00G1178200 Malus domestica HOM05D000065 ORTHO05D010107 3.5e-07 57.8 48 52.1
Nn6g34577 Nelumbo nucifera HOM05D000065 ORTHO05D010107 3.5e-07 57.8 51 43.1
RcHm_v2.0_Chr1g0333821 Rosa chinensis HOM05D000065 ORTHO05D010107 3.5e-07 57.8 50 50.0
VMungo0647G0920 Vigna mungo HOM05D000065 ORTHO05D010107 3.5e-07 57.8 49 49.0
CANSAT54G0711 Cannabis sativa HOM05D000065 ORTHO05D010107 4.6e-07 57.4 49 51.0
Sabra09G0123400 Salix brachista HOM05D000065 ORTHO05D010107 4.6e-07 57.4 51 52.9
Hma1.2p1_0218F.1_g092530 Hydrangea macrophylla HOM05D000065 ORTHO05D010107 6.0e-07 57.0 46 54.3
Phvul.008G208114 Phaseolus vulgaris HOM05D000065 ORTHO05D010107 1.0e-06 56.2 49 46.9
arahy.Tifrunner.gnm1.ann1.IK0X0N Arachis hypogaea HOM05D000065 ORTHO05D010107 1.3e-06 55.8 48 50.0
PSO339G5735 Papaver somniferum HOM05D000065 ORTHO05D010107 1.3e-06 55.8 50 48.0
PSO384G1437 Papaver somniferum HOM05D000065 ORTHO05D010107 1.3e-06 55.8 50 48.0
PSO384G2278 Papaver somniferum HOM05D000065 ORTHO05D010107 1.3e-06 55.8 50 48.0
arahy.Tifrunner.gnm1.ann1.VJ8A09 Arachis hypogaea HOM05D000065 ORTHO05D010107 1.7e-06 55.5 48 47.9
COL.COLO4_25289 Corchorus olitorius HOM05D000065 ORTHO05D010107 1.7e-06 55.5 48 52.1
MBI13_g00571_MAGBIO Magnolia biondii HOM05D000065 ORTHO05D010107 1.7e-06 55.5 49 44.9
Thecc.09G263500 Theobroma cacao HOM05D000065 ORTHO05D010107 1.7e-06 55.5 50 44.0
Cfa010250 Carpinus fangiana HOM05D006479 ORTHO05D008310 3.0e-06 54.7 48 47.9
Haze_23642 Corylus avellana HOM05D000065 ORTHO05D010107 3.0e-06 54.7 48 47.9
FAN01G0208 Fragaria x ananassa HOM05D000065 ORTHO05D010107 3.0e-06 54.7 48 50.0
PSO384G0934 Papaver somniferum HOM05D000065 ORTHO05D010107 3.0e-06 54.7 50 48.0
CiPaw.13G128000 Carya illinoinensis HOM05D000065 ORTHO05D010107 3.9e-06 54.3 51 43.1
CDE02G2783 Ceratophyllum demersum HOM05D000065 ORTHO05D010107 3.9e-06 54.3 50 44.0
FvH4_7g06121 Fragaria vesca HOM05D000065 ORTHO05D010107 3.9e-06 54.3 46 47.8
Ah.08g222710 Amaranthus hybridus HOM05D000065 ORTHO05D010107 5.1e-06 53.9 49 42.9
Gohir.A07G115200 Gossypium hirsutum HOM05D000065 ORTHO05D010107 5.1e-06 53.9 51 41.2


User provided reference genes

Program Settings