Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 4.7e-247 857.4 441 100.0
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 8.5e-148 527.7 444 61.0
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 2.0e-144 516.5 425 61.9
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 5.0e-140 501.9 447 62.0
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 8.5e-140 501.1 445 58.9
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 5.5e-139 498.4 447 61.7
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 4.0e-137 492.3 436 61.9
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 2.0e-136 490.0 427 63.0
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 1.1e-134 484.2 447 59.5
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 2.0e-133 479.9 395 63.8
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 3.5e-133 479.2 454 58.6
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 5.9e-133 478.4 441 60.3
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 1.0e-132 477.6 441 59.2
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 3.8e-132 475.7 440 59.8
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 1.1e-131 474.2 440 60.2
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 1.2e-130 470.7 440 60.5
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 1.2e-130 470.7 446 60.5
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 4.7e-130 468.8 445 59.3
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 4.7e-130 468.8 440 59.5
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 6.1e-130 468.4 441 58.7
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.0e-129 466.1 443 58.9
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 5.2e-129 465.3 434 59.2
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 5.2e-129 465.3 449 60.6
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.2e-128 464.2 443 58.7
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 1.2e-128 464.2 434 59.9
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 4.4e-128 462.2 445 58.4
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 5.7e-128 461.8 449 60.4
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 9.8e-128 461.1 432 59.7
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.3e-127 460.7 446 56.3
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.1e-126 457.6 443 58.0
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 2.4e-126 456.4 422 58.3
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 2.4e-126 456.4 427 60.2
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 5.4e-126 455.3 449 55.2
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 2.0e-125 453.4 434 58.5
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.3e-124 450.7 395 61.5
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 5.0e-124 448.7 450 55.6
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 6.6e-124 448.4 422 56.9
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 1.5e-123 447.2 439 57.6
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 1.6e-122 443.7 444 56.8
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 3.6e-122 442.6 440 56.4
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 1.4e-121 440.7 463 55.5
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 1.8e-121 440.3 442 57.2
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 7.5e-120 434.9 434 57.1
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 2.2e-119 433.3 430 56.7
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 4.9e-119 432.2 444 55.0
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 1.1e-118 431.0 437 55.6
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 7.0e-118 428.3 427 56.2
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 1.6e-117 427.2 443 55.8
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 7.8e-117 424.9 444 55.0
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 1.0e-116 424.5 434 55.3
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 2.9e-116 422.9 431 54.3
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.9e-115 420.2 419 55.1
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 3.3e-115 419.5 416 56.7
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.2e-114 417.5 419 53.5
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 1.6e-114 417.2 399 56.6
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 1.6e-114 417.2 398 56.5
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 1.6e-114 417.2 445 53.0
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 2.8e-114 416.4 414 56.0
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 2.8e-114 416.4 441 53.5
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 8.0e-114 414.8 404 55.0
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 1.0e-113 414.5 358 62.6
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 5.2e-113 412.1 445 53.5
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 6.8e-113 411.8 418 52.9
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 8.9e-113 411.4 404 54.5
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 3.4e-112 409.5 472 51.5
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 7.5e-112 408.3 419 52.5
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 1.1e-110 404.4 415 53.0
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 4.1e-110 402.5 427 53.2
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 7.0e-110 401.7 422 52.6
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 2.7e-109 399.8 453 49.2
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 3.5e-109 399.4 402 55.7
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 4.6e-109 399.1 453 48.8
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 6.0e-109 398.7 453 48.8
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 6.0e-109 398.7 453 48.8
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 1.3e-108 397.5 453 48.8
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 2.1e-106 390.2 402 53.0
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.8e-106 389.8 445 53.0
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 8.0e-106 388.3 445 52.8
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 1.4e-105 387.5 426 52.1
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 2.6e-104 383.3 414 51.0
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 4.4e-104 382.5 449 49.7
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 5.8e-104 382.1 415 51.6
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 2.2e-103 380.2 421 49.9
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 2.9e-103 379.8 456 49.8
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 2.9e-103 379.8 451 49.9
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 3.7e-103 379.4 407 53.3
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 3.7e-103 379.4 450 50.0
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 3.7e-103 379.4 450 50.0
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 6.4e-103 378.6 452 50.0
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 1.4e-102 377.5 453 49.7
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 5.4e-102 375.6 449 49.7
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 9.2e-102 374.8 445 49.2
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 1.6e-101 374.0 418 50.5
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 4.6e-101 372.5 454 48.5
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 5.1e-100 369.0 332 61.4
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 8.6e-100 368.2 445 50.1
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 7.3e-99 365.2 412 49.3
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 2.9e-95 353.2 382 50.3
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 3.2e-94 349.7 436 47.7
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 5.4e-94 349.0 352 57.1
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 6.2e-90 335.5 349 53.0
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 4.9e-87 325.9 436 45.0
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 3.0e-84 316.6 312 57.1
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 1.5e-83 314.3 349 50.1
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 3.3e-83 313.2 416 45.9
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 1.1e-78 298.1 441 44.7
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 2.7e-77 293.5 446 42.6
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 4.8e-74 282.7 344 51.7
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.3e-68 264.6 348 46.6
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 2.1e-66 257.3 419 39.4
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 3.7e-66 256.5 399 40.6
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 8.1e-66 255.4 259 55.6
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 3.8e-63 246.5 233 59.2
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 2.3e-60 237.3 446 41.0
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 1.2e-53 214.9 268 50.0
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 2.1e-53 214.2 208 54.8
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 4.8e-50 203.0 400 34.8
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 1.8e-49 201.1 250 46.0
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 5.3e-49 199.5 406 33.7
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.5e-48 198.0 399 32.8
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 5.1e-44 183.0 423 34.0
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 9.4e-22 109.0 215 36.3
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 4.7e-21 106.7 408 27.0
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 6.3e-18 96.3 112 53.6
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 6.3e-18 96.3 390 26.4
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 1.2e-16 92.0 417 25.4
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 1.1e-14 85.5 217 32.7
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 2.5e-14 84.3 178 33.1
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.0e-12 79.0 173 35.8
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 4.1e-09 67.0 79 46.8
TAR362G0073 Trochodendron aralioides HOM05D001652 ORTHO05D001768 1.7e-07 61.6 76 46.1


User provided reference genes

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