Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029034.1 Olea europaea HOM05D003094 ORTHO05D003482 7.3e-95 350.5 173 100.0
Oeu052057.1 Olea europaea HOM05D003094 ORTHO05D003482 1.9e-26 123.2 85 75.3
Migut.D00778 Erythranthe guttata HOM05D003094 ORTHO05D003482 2.7e-25 119.4 85 69.4
CiPaw.16G089100 Carya illinoinensis HOM05D003094 ORTHO05D003482 6.1e-25 118.2 85 71.8
FvH4_6g26830 Fragaria vesca HOM05D003094 ORTHO05D003482 1.4e-24 117.1 85 64.7
FAN14G2495 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.4e-24 117.1 85 64.7
Lj9A424T34 Lonicera japonica HOM05D003094 ORTHO05D003482 1.4e-24 117.1 89 66.3
Haze_18734 Corylus avellana HOM05D003094 ORTHO05D003482 2.3e-24 116.3 85 70.6
RcHm_v2.0_Chr2g0128201 Rosa chinensis HOM05D003094 ORTHO05D003482 3.0e-24 115.9 85 64.7
Cc04_g06860 Coffea canephora HOM05D003094 ORTHO05D003482 4.0e-24 115.5 85 64.7
FAN02G1016 Fragaria x ananassa HOM05D003094 ORTHO05D003482 4.0e-24 115.5 85 63.5
FAN05G2182 Fragaria x ananassa HOM05D003094 ORTHO05D003482 4.0e-24 115.5 85 63.5
Cfa019732 Carpinus fangiana HOM05D003094 ORTHO05D003482 6.7e-24 114.8 85 69.4
TWI60G1358 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 6.7e-24 114.8 85 68.2
MD06G1220500 Malus domestica HOM05D003094 ORTHO05D003482 5.7e-23 111.7 85 65.9
GSVIVG01008338001 Vitis vinifera HOM05D003094 ORTHO05D003482 5.7e-23 111.7 85 67.1
SGA_v2.0_scaffold29G12062 Striga asiatica HOM05D003094 ORTHO05D003482 9.7e-23 110.9 84 65.5
Solyc03g119170.3 Solanum lycopersicum HOM05D003094 ORTHO05D003482 2.2e-22 109.8 85 61.2
Sopen03g038060 Solanum pennellii HOM05D003094 ORTHO05D003482 2.2e-22 109.8 85 61.2
PGSC0003DMG402005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 2.2e-22 109.8 85 61.2
Glyma.05G139400 Glycine max HOM05D003094 ORTHO05D003482 2.8e-22 109.4 85 65.9
Rhsim10G0183200 Rhododendron simsii HOM05D003094 ORTHO05D003482 4.8e-22 108.6 85 63.5
Actinidia19943 Actinidia chinensis HOM05D003094 ORTHO05D003482 6.3e-22 108.2 85 62.4
Actinidia36579 Actinidia chinensis HOM05D003094 ORTHO05D003482 6.3e-22 108.2 85 62.4
CANSAT80G1577 Cannabis sativa HOM05D003094 ORTHO05D003482 1.1e-21 107.5 168 43.5
Psat7g083520 Pisum sativum HOM05D003094 ORTHO05D003482 1.1e-21 107.5 151 46.4
VMungo0251G1973 Vigna mungo HOM05D003094 ORTHO05D003482 1.1e-21 107.5 85 64.7
QL10p026547 Quercus lobata HOM05D003094 ORTHO05D003482 1.4e-21 107.1 85 63.5
Glyma.08G094700 Glycine max HOM05D003094 ORTHO05D003482 1.8e-21 106.7 85 64.7
Peaxi162Scf00683g00159 Petunia axillaris HOM05D003094 ORTHO05D003482 1.8e-21 106.7 87 59.8
Duzib213G0897 Durio zibethinus HOM05D003094 ORTHO05D003482 2.4e-21 106.3 85 64.7
ClCG06G014600 Citrullus lanatus HOM05D003094 ORTHO05D003482 3.1e-21 105.9 85 64.7
Phvul.002G182800 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 3.1e-21 105.9 85 63.5
CAN.G1129.13 Capsicum annuum HOM05D003094 ORTHO05D003482 4.1e-21 105.5 87 57.5
Dinv12225 Davidia involucrata HOM05D003094 ORTHO05D003482 4.1e-21 105.5 85 62.4
HanXRQChr14g0446571 Helianthus annuus HOM05D003094 ORTHO05D003482 5.3e-21 105.1 85 61.2
MD14G1229900 Malus domestica HOM05D003094 ORTHO05D003482 5.3e-21 105.1 85 62.4
SalBow7G3604 Salvia bowleyana HOM05D003094 ORTHO05D003482 7.0e-21 104.8 85 58.8
Sed0020442 Sechium edule HOM05D003094 ORTHO05D003482 7.0e-21 104.8 85 62.4
Sc04g0003380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 7.0e-21 104.8 85 63.5
Lsat_1_v5_gn_2_64400 Lactuca sativa HOM05D003094 ORTHO05D003482 9.1e-21 104.4 85 61.2
Ca_11586_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 1.2e-20 104.0 85 63.5
Ciclev10020325m.g Citrus clementina HOM05D003094 ORTHO05D003482 1.2e-20 104.0 85 64.7
Nitab4.5_0001986g0070 Nicotiana tabacum HOM05D003094 ORTHO05D003482 2.6e-20 102.8 85 57.6
Nitab4.5_0004955g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 2.6e-20 102.8 85 57.6
CsaV3_1G004020 Cucumis sativus L. HOM05D003094 ORTHO05D003482 3.5e-20 102.4 85 60.0
Eucgr.K02236 Eucalyptus grandis HOM05D003094 ORTHO05D003482 3.5e-20 102.4 90 58.9
Thecc.07G091700 Theobroma cacao HOM05D003094 ORTHO05D003482 5.9e-20 101.7 85 60.0
Manes.05G133000 Manihot esculenta HOM05D003094 ORTHO05D003482 7.7e-20 101.3 85 62.4
Atru.chr9.905 Acer truncatum HOM05D003094 ORTHO05D003482 1.0e-19 100.9 85 61.2
Lj4g0013095 Lotus japonicus HOM05D003094 ORTHO05D003482 1.7e-19 100.1 85 60.0
TAR374G0309 Trochodendron aralioides HOM05D003094 ORTHO05D003482 1.7e-19 100.1 85 57.6
TAR374G0733 Trochodendron aralioides HOM05D003094 ORTHO05D003482 1.7e-19 100.1 85 57.6
CSS0029576 Camellia sinensis var. sinensis HOM05D003094 ORTHO05D003482 2.2e-19 99.8 85 57.6
SHI53281 Sapria himalayana HOM05D003094 ORTHO05D003482 2.2e-19 99.8 85 60.0
vmacro07219 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 3.8e-19 99.0 85 60.0
MSTRG.4516 Avicennia marina HOM05D003094 ORTHO05D003482 5.0e-19 98.6 85 60.0
MELO3C017325.2 Cucumis melo HOM05D003094 ORTHO05D003482 1.1e-18 97.4 85 57.6
ECA238G4750 Erigeron canadensis HOM05D003094 ORTHO05D003482 1.5e-18 97.1 96 52.1
THA.LOC104820380 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 1.5e-18 97.1 96 46.9
arahy.Tifrunner.gnm1.ann1.D1K70W Arachis hypogaea HOM05D003094 ORTHO05D003482 1.9e-18 96.7 85 61.2
Aa31LG8G5090 Aethionema arabicum HOM05D003094 ORTHO05D003482 2.5e-18 96.3 85 52.9
arahy.Tifrunner.gnm1.ann1.2IG2A1 Arachis hypogaea HOM05D003094 ORTHO05D003482 2.5e-18 96.3 85 61.2
EL10Ac7g16627 Beta vulgaris HOM05D003094 ORTHO05D003482 2.5e-18 96.3 85 57.6
BolC5t33491H Brassica oleracea HOM05D003094 ORTHO05D003482 2.5e-18 96.3 88 55.7
C05p47760 Brassica napus HOM05D003094 ORTHO05D003482 3.2e-18 95.9 88 55.7
PGR044G0078 Punica granatum HOM05D003094 ORTHO05D003482 4.2e-18 95.5 85 58.8
BraA05t21983Z Brassica rapa HOM05D003094 ORTHO05D003482 5.5e-18 95.1 88 55.7
Gohir.A13G146900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 5.5e-18 95.1 85 56.5
Gorai.013G170500 Gossypium raimondii HOM05D003094 ORTHO05D003482 5.5e-18 95.1 85 56.5
A05p31440 Brassica napus HOM05D003094 ORTHO05D003482 7.2e-18 94.7 88 55.7
Sp3g16360 Schrenkiella parvula HOM05D003094 ORTHO05D003482 7.2e-18 94.7 97 50.5
Hund11930 Selenicereus undatus HOM05D003094 ORTHO05D003482 9.4e-18 94.4 85 58.8
EL10Ac4g10181 Beta vulgaris HOM05D003094 ORTHO05D003482 1.2e-17 94.0 85 55.3
HPP92_008848 Vanilla planifolia HOM05D003094 ORTHO05D003482 1.2e-17 94.0 85 58.8
HPP92_008864 Vanilla planifolia HOM05D003094 ORTHO05D003482 1.2e-17 94.0 85 58.8
Gohir.A13G146300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.1e-17 93.2 85 55.3
Gohir.D13G151300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.1e-17 93.2 85 55.3
MBI16_g44830_MAGBIO Magnolia biondii HOM05D003094 ORTHO05D003482 2.1e-17 93.2 85 57.6
Cpa.g.sc51.5 Carica papaya HOM05D003094 ORTHO05D003482 6.1e-17 91.7 113 48.7
Carub.0003s1800 Capsella rubella HOM05D003094 ORTHO05D003482 1.4e-16 90.5 96 49.0
CARHR093590 Cardamine hirsuta HOM05D003094 ORTHO05D003482 1.8e-16 90.1 97 48.5
Thhalv10020806m.g Eutrema salsugineum HOM05D003094 ORTHO05D003482 2.3e-16 89.7 86 52.3
AT3G18240 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 3.0e-16 89.4 97 46.4
AL3G31470 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 4.0e-16 89.0 97 45.4
Gohir.D13G152004 Gossypium hirsutum HOM05D003094 ORTHO05D003482 4.0e-16 89.0 85 52.9
unitig_21.g20424 Utricularia gibba HOM05D003094 ORTHO05D003482 4.0e-16 89.0 85 51.8
ATR0757G079 Amborella trichopoda HOM05D003094 ORTHO05D003482 5.2e-16 88.6 86 53.5
BcaC05g28648 Brassica carinata HOM05D003094 ORTHO05D003482 5.2e-16 88.6 79 57.0
AUR62042498 Chenopodium quinoa HOM05D003094 ORTHO05D003482 5.2e-16 88.6 85 51.8
AUR62040348 Chenopodium quinoa HOM05D003094 ORTHO05D003482 6.8e-16 88.2 85 51.8
AT4G21460 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 3.4e-15 85.9 97 45.4
PSO017G6706 Papaver somniferum HOM05D003094 ORTHO05D003482 4.4e-15 85.5 142 39.4
PSO063G0897 Papaver somniferum HOM05D003094 ORTHO05D003482 4.4e-15 85.5 142 39.4
Os08g0513300 Oryza sativa ssp. japonica HOM05D003094 ORTHO05D003482 1.3e-14 84.0 85 49.4
CDE11G0955 Ceratophyllum demersum HOM05D003094 ORTHO05D003482 2.2e-14 83.2 85 49.4
TPR.G5116 Trifolium pratense HOM05D003094 ORTHO05D003482 1.1e-13 80.9 85 52.9
Zm00001eb143930 Zea mays HOM05D003094 ORTHO05D003482 1.4e-13 80.5 85 45.9
Potri.015G044100 Populus trichocarpa HOM05D003094 ORTHO05D003482 1.8e-13 80.1 85 48.2
Gorai.013G169300 Gossypium raimondii HOM05D003094 ORTHO05D003482 2.4e-13 79.7 84 50.0
Sabra15G0041200 Salix brachista HOM05D003094 ORTHO05D003482 5.4e-13 78.6 85 48.2
Gohir.A02G112001 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.6e-12 77.0 75 53.3
Prupe.5G224900 Prunus persica HOM05D003094 ORTHO05D003482 2.0e-12 76.6 85 52.9
Nitab4.5_0004028g0060 Nicotiana tabacum HOM05D003094 ORTHO05D003482 3.5e-12 75.9 84 47.6
Gohir.D10G153150 Gossypium hirsutum HOM05D003094 ORTHO05D003482 4.5e-12 75.5 89 44.9
COL.COLO4_27184 Corchorus olitorius HOM05D003094 ORTHO05D003482 5.9e-12 75.1 87 46.0
Gorai.012G098500 Gossypium raimondii HOM05D000575 ORTHO05D003482 5.9e-12 75.1 75 52.0
Gorai.001G159100 Gossypium raimondii HOM05D003094 ORTHO05D003482 2.2e-11 73.2 72 51.4
Gohir.D05G318800 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.9e-11 72.8 72 52.8
Gohir.D09G047900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.9e-11 72.8 75 52.0
Gorai.003G056600 Gossypium raimondii HOM05D003094 ORTHO05D003482 8.5e-11 71.2 72 51.4
Nn3g17957 Nelumbo nucifera HOM05D003094 ORTHO05D003482 8.5e-11 71.2 64 56.2
Gohir.D07G182700 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.9e-10 70.1 72 50.0
SEGI_02552 Sequoiadendron giganteum HOM05D003094 ORTHO05D003482 3.2e-10 69.3 71 50.7
Gohir.D08G096900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 5.5e-10 68.6 72 50.0
FvH4_5g16690 Fragaria vesca HOM05D003094 ORTHO05D003482 1.2e-09 67.4 96 41.7
Lalb_Chr08g0242311 Lupinus albus HOM05D003094 ORTHO05D003482 1.2e-09 67.4 85 42.4
FAN18G0043 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.6e-09 67.0 96 41.7
FAN08G1507 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.0e-08 64.3 90 43.3
TPR.G35824 Trifolium pratense HOM05D003094 ORTHO05D003482 1.8e-08 63.5 85 44.7
FAN13G1164 Fragaria x ananassa HOM05D003094 ORTHO05D003482 4.0e-08 62.4 91 40.7
Nitab4.5_0008639g0040 Nicotiana tabacum HOM05D000806 ORTHO05D002324 8.8e-08 61.2 47 57.4
Dinv17506 Davidia involucrata HOM05D003094 ORTHO05D003482 2.0e-07 60.1 61 49.2
RcHm_v2.0_Chr7g0179411 Rosa chinensis HOM05D003094 ORTHO05D003482 3.4e-07 59.3 94 37.2
Dinv07353 Davidia involucrata HOM05D003094 ORTHO05D003482 5.7e-07 58.5 61 45.9
Dinv09627 Davidia involucrata HOM05D003094 ORTHO05D003482 5.7e-07 58.5 61 45.9
BraA02t06932Z Brassica rapa HOM05D003094 ORTHO05D003482 7.5e-07 58.2 77 40.3
Sed0019035 Sechium edule HOM05D003094 ORTHO05D003482 9.8e-07 57.8 83 37.3
BcaB05g24812 Brassica carinata HOM05D003094 ORTHO05D003482 1.3e-06 57.4 79 32.9
BcaC03g15460 Brassica carinata HOM05D003094 ORTHO05D003482 1.3e-06 57.4 63 42.9
A02p18880 Brassica napus HOM05D003094 ORTHO05D003482 1.3e-06 57.4 63 42.9
BolC2t09174H Brassica oleracea HOM05D003094 ORTHO05D003482 1.3e-06 57.4 63 42.9
vmacro16434 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 2.2e-06 56.6 64 46.9
Duzib084G0458 Durio zibethinus HOM05D003094 ORTHO05D003482 2.8e-06 56.2 127 31.5
Prupe.5G225000 Prunus persica HOM05D003094 ORTHO05D003482 2.8e-06 56.2 74 40.5
AL2G33580 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 3.7e-06 55.8 68 39.7
C02p31410 Brassica napus HOM05D003094 ORTHO05D003482 3.7e-06 55.8 75 38.7
Cpa.g.sc3.463 Carica papaya HOM05D003094 ORTHO05D003482 4.9e-06 55.5 74 40.5
Thhalv10019822m.g Eutrema salsugineum HOM05D003094 ORTHO05D003482 4.9e-06 55.5 74 37.8
Ciclev10023622m.g Citrus clementina HOM05D003094 ORTHO05D003482 6.3e-06 55.1 69 46.4
Nitab4.5_0008678g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 6.3e-06 55.1 112 33.0
THA.LOC104812151 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 8.3e-06 54.7 73 41.1


User provided reference genes

Program Settings