Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu029003.1 Olea europaea HOM05D000932 ORTHO05D000729 7.1e-102 374.0 199 100.0
Dinv19607 Davidia involucrata HOM05D000932 ORTHO05D000729 6.1e-29 131.7 180 48.3
Dinv42503 Davidia involucrata HOM05D000932 ORTHO05D000729 4.9e-26 122.1 187 44.4
QL04p077060 Quercus lobata HOM05D000932 ORTHO05D000729 1.0e-20 104.4 141 45.4
GSVIVG01020352001 Vitis vinifera HOM05D000932 ORTHO05D000729 3.0e-20 102.8 111 54.1
Actinidia12780 Actinidia chinensis HOM05D000932 ORTHO05D000729 8.9e-20 101.3 180 42.2
MSTRG.14549 Avicennia marina HOM05D000932 ORTHO05D000729 2.2e-18 96.7 183 41.0
MSTRG.7065 Avicennia marina HOM05D000932 ORTHO05D000729 8.3e-18 94.7 187 41.2
DCAR_013732 Daucus carota HOM05D000932 ORTHO05D000729 2.4e-17 93.2 181 38.7
Manes.14G012100 Manihot esculenta HOM05D000932 ORTHO05D000729 4.1e-17 92.4 191 38.7
CSS0007596 Camellia sinensis var. sinensis HOM05D000932 ORTHO05D000729 9.2e-17 91.3 187 39.0
CSS0019563 Camellia sinensis var. sinensis HOM05D000932 ORTHO05D000729 9.2e-17 91.3 187 39.0
TPR.G33849 Trifolium pratense HOM05D000932 ORTHO05D000729 1.2e-16 90.9 196 38.3
vmacro11719 Vaccinium macrocarpon HOM05D000932 ORTHO05D000729 1.2e-16 90.9 194 36.1
Psat1g004200 Pisum sativum HOM05D000932 ORTHO05D000729 1.6e-16 90.5 191 38.7
Cpa.g.sc331.5 Carica papaya HOM05D000932 ORTHO05D000729 4.6e-16 89.0 165 38.2
Ca_03657_v3 Cicer arietinum L. HOM05D000932 ORTHO05D000729 4.6e-16 89.0 211 36.5
Ciclev10005692m.g Citrus clementina HOM05D000932 ORTHO05D000729 7.8e-16 88.2 175 38.9
Gohir.D05G329800 Gossypium hirsutum HOM05D000932 ORTHO05D000729 2.3e-15 86.7 204 40.2
Medtr2g068730 Medicago truncatula HOM05D000932 ORTHO05D000729 2.3e-15 86.7 193 37.3
Glyma.15G258200 Glycine max HOM05D000932 ORTHO05D000729 3.9e-15 85.9 200 37.0
Gorai.009G353200 Gossypium raimondii HOM05D000932 ORTHO05D000729 3.9e-15 85.9 204 40.2
Atru.chr1.187 Acer truncatum HOM05D000932 ORTHO05D000729 5.0e-15 85.5 157 40.8
TWI39G0598 Tripterygium wilfordii HOM05D000932 ORTHO05D000729 6.6e-15 85.1 193 33.2
VMungo1080G1674 Vigna mungo HOM05D000932 ORTHO05D000729 6.6e-15 85.1 189 38.6
COL.COLO4_38372 Corchorus olitorius HOM05D000932 ORTHO05D000729 8.6e-15 84.7 195 41.0
SGA_v2.0_scaffold7G03595 Striga asiatica HOM05D000932 ORTHO05D000729 1.5e-14 84.0 207 35.7
Phvul.005G049801 Phaseolus vulgaris HOM05D000932 ORTHO05D000729 3.3e-14 82.8 185 41.1
SalBow8G4218 Salvia bowleyana HOM05D000932 ORTHO05D000729 4.3e-14 82.4 147 44.2
Duzib187G0060 Durio zibethinus HOM05D000932 ORTHO05D000729 5.6e-14 82.0 189 40.7
Glyma.08G168900 Glycine max HOM05D000932 ORTHO05D000729 5.6e-14 82.0 202 35.6
Lalb_Chr25g0284851 Lupinus albus HOM05D000932 ORTHO05D000729 7.3e-14 81.6 198 37.4
Potri.005G097700 Populus trichocarpa HOM05D000932 ORTHO05D000729 9.5e-14 81.3 203 36.5
Gohir.A04G051500 Gossypium hirsutum HOM05D000932 ORTHO05D000729 1.6e-13 80.5 207 39.1
Thecc.07G160100 Theobroma cacao HOM05D000932 ORTHO05D000729 2.1e-13 80.1 195 37.4
Manes.06G173600 Manihot esculenta HOM05D000932 ORTHO05D000729 3.6e-13 79.3 129 43.4
Migut.M01547 Erythranthe guttata HOM05D000932 ORTHO05D000729 8.0e-13 78.2 191 39.3
Cc05_g16220 Coffea canephora HOM05D000932 ORTHO05D000729 1.4e-12 77.4 90 48.9
Lsat_1_v5_gn_7_111641 Lactuca sativa HOM05D000932 ORTHO05D000729 1.4e-12 77.4 157 35.7
TAR627G0514 Trochodendron aralioides HOM05D000932 ORTHO05D000729 1.4e-12 77.4 154 40.3
PGR083G2114 Punica granatum HOM05D000932 ORTHO05D000729 2.3e-12 76.6 128 39.1
Sabra05G0080000 Salix brachista HOM05D000932 ORTHO05D000729 4.0e-12 75.9 163 38.0
Sed0004309 Sechium edule HOM05D000932 ORTHO05D000729 8.9e-12 74.7 187 35.3
Duzib213G0490 Durio zibethinus HOM05D000932 ORTHO05D000729 1.2e-11 74.3 194 37.6
MD05G1222200 Malus domestica HOM05D000932 ORTHO05D000729 2.0e-11 73.6 204 32.8
arahy.Tifrunner.gnm1.ann1.UNUG60 Arachis hypogaea HOM05D000932 ORTHO05D000729 4.4e-11 72.4 205 37.1
Lj3g0007504 Lotus japonicus HOM05D000932 ORTHO05D000729 5.8e-11 72.0 187 34.2
arahy.Tifrunner.gnm1.ann1.9Y5DYJ Arachis hypogaea HOM05D000932 ORTHO05D000729 7.5e-11 71.6 119 43.7
Gorai.002G104600 Gossypium raimondii HOM05D000932 ORTHO05D000729 1.3e-10 70.9 185 34.1
Gohir.D01G079800 Gossypium hirsutum HOM05D000932 ORTHO05D000729 2.2e-10 70.1 185 34.1
RcHm_v2.0_Chr5g0026181 Rosa chinensis HOM05D000932 ORTHO05D000729 2.2e-10 70.1 207 32.9
Nitab4.5_0002633g0020 Nicotiana tabacum HOM05D000932 ORTHO05D000729 2.9e-10 69.7 82 52.4
THA.LOC104810263 Tarenaya hassleriana HOM05D000932 ORTHO05D000729 2.9e-10 69.7 185 34.6
ECA236G3534 Erigeron canadensis HOM05D000932 ORTHO05D000729 4.9e-10 68.9 158 34.2
BcaB04g21043 Brassica carinata HOM05D000932 ORTHO05D000729 6.4e-10 68.6 172 34.9
Potri.007G066800 Populus trichocarpa HOM05D000932 ORTHO05D000729 6.4e-10 68.6 168 36.9
Nn7g37950 Nelumbo nucifera HOM05D000932 ORTHO05D000729 1.1e-09 67.8 172 35.5
MD10G1203800 Malus domestica HOM05D000932 ORTHO05D000729 1.9e-09 67.0 202 33.2
PGSC0003DMG400022124 Solanum tuberosum HOM05D000932 ORTHO05D000729 2.4e-09 66.6 58 62.1
FAN21G0644 Fragaria x ananassa HOM05D000932 ORTHO05D000729 3.2e-09 66.2 206 32.5
Manes.06G173501 Manihot esculenta HOM05D000932 ORTHO05D000729 3.2e-09 66.2 172 34.9
Haze_07843 Corylus avellana HOM05D000932 ORTHO05D000729 7.0e-09 65.1 59 61.0
THA.LOC104822755 Tarenaya hassleriana HOM05D000932 ORTHO05D000729 7.0e-09 65.1 189 32.8
Aqoxy3G01009 Aquilegia oxysepala HOM05D000932 ORTHO05D000729 9.2e-09 64.7 178 33.7
BcaC09g48274 Brassica carinata HOM05D000932 ORTHO05D000729 9.2e-09 64.7 174 35.1
BcaC09g48275 Brassica carinata HOM05D000932 ORTHO05D000729 9.2e-09 64.7 174 35.1
BolC1t05165H Brassica oleracea HOM05D000932 ORTHO05D000729 9.2e-09 64.7 174 35.1
Gohir.A01G095600 Gossypium hirsutum HOM05D000932 ORTHO05D000729 9.2e-09 64.7 188 36.2
HanXRQChr11g0335061 Helianthus annuus HOM05D000932 ORTHO05D000729 9.2e-09 64.7 123 38.2
Sc09g0007680 Simmondsia chinensis HOM05D000932 ORTHO05D000729 1.2e-08 64.3 55 63.6
Sopen07g034670 Solanum pennellii HOM05D000932 ORTHO05D000729 1.2e-08 64.3 58 60.3
EL10Ac2g03170 Beta vulgaris HOM05D000932 ORTHO05D000729 2.0e-08 63.5 197 31.0
Sp3g11030 Schrenkiella parvula HOM05D000932 ORTHO05D000729 2.0e-08 63.5 182 31.9
A01p40650 Brassica napus HOM05D000932 ORTHO05D000729 3.5e-08 62.8 180 33.9
C01p52260 Brassica napus HOM05D000932 ORTHO05D000729 3.5e-08 62.8 173 34.1
Solyc07g066510.4 Solanum lycopersicum HOM05D000932 ORTHO05D000729 3.5e-08 62.8 58 58.6
BraA01t04099Z Brassica rapa HOM05D000932 ORTHO05D000729 4.6e-08 62.4 182 33.5
MELO3C019654.2 Cucumis melo HOM05D000932 ORTHO05D000729 4.6e-08 62.4 152 36.2
CsaV3_7G022750 Cucumis sativus L. HOM05D000932 ORTHO05D000729 1.0e-07 61.2 194 29.4
Sabra01G0105800 Salix brachista HOM05D000932 ORTHO05D000729 1.0e-07 61.2 181 32.0
FAN16G2793 Fragaria x ananassa HOM05D000932 ORTHO05D000729 1.3e-07 60.8 72 52.8
CsaV3_6G013650 Cucumis sativus L. HOM05D000932 ORTHO05D000729 1.7e-07 60.5 63 58.7
FvH4_3g15550 Fragaria vesca HOM05D000932 ORTHO05D000729 1.7e-07 60.5 128 39.1
FAN11G1453 Fragaria x ananassa HOM05D000932 ORTHO05D000729 1.7e-07 60.5 128 39.1
Potri.001G136700 Populus trichocarpa HOM05D000932 ORTHO05D000729 1.7e-07 60.5 147 36.7
Hund20095 Selenicereus undatus HOM05D000932 ORTHO05D000729 1.7e-07 60.5 50 70.0
BolC3t16868H Brassica oleracea HOM05D000932 ORTHO05D000729 2.3e-07 60.1 179 30.7
FAN25G3067 Fragaria x ananassa HOM05D000932 ORTHO05D000729 3.9e-07 59.3 72 52.8
BcaB04g18734 Brassica carinata HOM05D000932 ORTHO05D000729 5.0e-07 58.9 180 32.8
CARHR087410 Cardamine hirsuta HOM05D000932 ORTHO05D000729 5.0e-07 58.9 182 31.9
AL3G24560 Arabidopsis lyrata HOM05D000932 ORTHO05D000729 6.6e-07 58.5 180 32.2
Cfa019414 Carpinus fangiana HOM05D000932 ORTHO05D000729 6.6e-07 58.5 45 66.7
Lalb_Chr03g0031751 Lupinus albus HOM05D000932 ORTHO05D000729 6.6e-07 58.5 51 66.7
C03p45910 Brassica napus HOM05D000932 ORTHO05D000729 1.1e-06 57.8 181 29.8
Sed0011603 Sechium edule HOM05D000932 ORTHO05D000729 1.1e-06 57.8 53 64.2
AT3G12890 Arabidopsis thaliana HOM05D000932 ORTHO05D000729 1.5e-06 57.4 62 56.5
BcaC01g04040 Brassica carinata HOM05D000932 ORTHO05D000729 1.5e-06 57.4 181 29.8
BcaC05g29229 Brassica carinata HOM05D000932 ORTHO05D000729 1.5e-06 57.4 178 32.0
C05p55040 Brassica napus HOM05D000932 ORTHO05D000729 1.5e-06 57.4 178 32.0
BolC5t34172H Brassica oleracea HOM05D000932 ORTHO05D000729 1.5e-06 57.4 178 32.0
CiPaw.11G062200 Carya illinoinensis HOM05D000932 ORTHO05D000729 1.5e-06 57.4 189 34.4
Peaxi162Scf00452g00622 Petunia axillaris HOM05D000932 ORTHO05D000729 1.5e-06 57.4 47 68.1
Nitab4.5_0002321g0050 Nicotiana tabacum HOM05D000932 ORTHO05D000729 1.9e-06 57.0 188 33.0
ClCG09G022600 Citrullus lanatus HOM05D000932 ORTHO05D000729 2.5e-06 56.6 65 53.8
MELO3C012623.2 Cucumis melo HOM05D000932 ORTHO05D000729 2.5e-06 56.6 72 47.2
Carub.0003s1225 Capsella rubella HOM05D000932 ORTHO05D000729 3.3e-06 56.2 181 32.6
Thhalv10022310m.g Eutrema salsugineum HOM05D000932 ORTHO05D000729 3.3e-06 56.2 180 33.3
A03p37850 Brassica napus HOM05D000932 ORTHO05D000729 4.3e-06 55.8 62 56.5
BraA03t12940Z Brassica rapa HOM05D000932 ORTHO05D000729 4.3e-06 55.8 62 56.5
Sed0021707 Sechium edule HOM05D000932 ORTHO05D000729 4.3e-06 55.8 153 36.6
A05p36610 Brassica napus HOM05D000932 ORTHO05D000729 5.6e-06 55.5 178 31.5
BraA05t22462Z Brassica rapa HOM05D000932 ORTHO05D000729 5.6e-06 55.5 178 31.5
SGA_v2.0_scaffold239G44049 Striga asiatica HOM05D000932 ORTHO05D000729 9.5e-06 54.7 55 58.2


User provided reference genes

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