Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028988.1 Olea europaea HOM05D004645 ORTHO05D005693 1.8e-169 599.4 341 100.0
Oeu027899.1 Olea europaea HOM05D004645 ORTHO05D005693 6.4e-143 511.1 341 82.7
MSTRG.26920 Avicennia marina HOM05D004645 ORTHO05D005693 3.4e-112 409.1 326 72.4
Nitab4.5_0009278g0030 Nicotiana tabacum HOM05D004645 ORTHO05D005693 4.5e-104 382.1 332 63.9
Cc02_g00050 Coffea canephora HOM05D004645 ORTHO05D005693 8.4e-103 377.9 332 69.0
Migut.L00703 Erythranthe guttata HOM05D004645 ORTHO05D005693 8.7e-100 367.9 341 66.9
Solyc03g097300.4 Solanum lycopersicum HOM05D004645 ORTHO05D005693 5.6e-99 365.2 334 63.8
Sopen03g028070 Solanum pennellii HOM05D004645 ORTHO05D005693 5.6e-99 365.2 334 63.8
Actinidia33801 Actinidia chinensis HOM05D004645 ORTHO05D005693 2.8e-98 362.8 333 65.5
PGSC0003DMG400026490 Solanum tuberosum HOM05D004645 ORTHO05D005693 3.7e-98 362.5 333 63.4
Gohir.A02G114700 Gossypium hirsutum HOM05D004645 ORTHO05D005693 1.1e-97 360.9 333 65.2
Thecc.05G223300 Theobroma cacao HOM05D004645 ORTHO05D005693 1.4e-97 360.5 329 65.3
Manes.09G130100 Manihot esculenta HOM05D004645 ORTHO05D005693 4.0e-97 359.0 326 66.6
Gohir.D03G055700 Gossypium hirsutum HOM05D004645 ORTHO05D005693 6.9e-97 358.2 334 64.4
CAN.G732.33 Capsicum annuum HOM05D004645 ORTHO05D005693 1.5e-96 357.1 335 63.3
Dinv01810 Davidia involucrata HOM05D004645 ORTHO05D005693 1.5e-96 357.1 341 63.9
Gorai.003G058500 Gossypium raimondii HOM05D004645 ORTHO05D005693 1.5e-96 357.1 337 63.8
Peaxi162Scf00516g00425 Petunia axillaris HOM05D004645 ORTHO05D005693 3.4e-96 355.9 329 66.0
GSVIVG01024286001 Vitis vinifera HOM05D004645 ORTHO05D005693 1.0e-95 354.4 249 73.1
VMungo1127G1262 Vigna mungo HOM05D004645 ORTHO05D005693 1.3e-95 354.0 327 65.4
Glyma.09G223000 Glycine max HOM05D004645 ORTHO05D005693 6.5e-95 351.7 329 64.7
Nitab4.5_0000021g0850 Nicotiana tabacum HOM05D004645 ORTHO05D005693 6.5e-95 351.7 251 72.9
BolC9t58802H Brassica oleracea HOM05D004645 ORTHO05D005693 1.4e-94 350.5 320 65.0
CSS0046309 Camellia sinensis var. sinensis HOM05D004645 ORTHO05D005693 1.4e-94 350.5 327 64.5
Lj1g0014871 Lotus japonicus HOM05D004645 ORTHO05D005693 1.9e-94 350.1 322 65.5
BcaB08g36765 Brassica carinata HOM05D004645 ORTHO05D005693 2.5e-94 349.7 324 64.8
AL6G28600 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 3.2e-94 349.4 322 64.6
Duzib177G0889 Durio zibethinus HOM05D004645 ORTHO05D005693 5.5e-94 348.6 347 60.8
C09p59630 Brassica napus HOM05D004645 ORTHO05D005693 7.1e-94 348.2 320 64.7
AT5G17510 Arabidopsis thaliana HOM05D004645 ORTHO05D005693 9.3e-94 347.8 323 64.1
CiPaw.06G036400 Carya illinoinensis HOM05D004645 ORTHO05D005693 9.3e-94 347.8 322 63.4
Glyma.12G014000 Glycine max HOM05D004645 ORTHO05D005693 9.3e-94 347.8 327 62.4
Phvul.011G016900 Phaseolus vulgaris HOM05D004645 ORTHO05D005693 2.1e-93 346.7 326 64.1
Hma1.2p1_0419F.1_g149550 Hydrangea macrophylla HOM05D004645 ORTHO05D005693 2.7e-93 346.3 355 60.3
BcaC04g18782 Brassica carinata HOM05D004645 ORTHO05D005693 7.9e-93 344.7 321 64.5
CiPaw.05G212200 Carya illinoinensis HOM05D004645 ORTHO05D005693 7.9e-93 344.7 330 62.4
A10p21880 Brassica napus HOM05D004645 ORTHO05D005693 1.0e-92 344.4 325 63.7
BraA10t44247Z Brassica rapa HOM05D004645 ORTHO05D005693 1.0e-92 344.4 325 63.7
Carub.0006s1574 Capsella rubella HOM05D004645 ORTHO05D005693 1.3e-92 344.0 329 62.9
MD01G1239600 Malus domestica HOM05D004645 ORTHO05D005693 2.3e-92 343.2 315 65.1
Medtr0004s0240 Medicago truncatula HOM05D004645 ORTHO05D005693 2.3e-92 343.2 325 62.5
Potri.013G076800 Populus trichocarpa HOM05D004645 ORTHO05D005693 2.3e-92 343.2 326 62.0
Hund09812 Selenicereus undatus HOM05D004645 ORTHO05D005693 2.3e-92 343.2 299 65.6
THA.LOC104820831 Tarenaya hassleriana HOM05D004645 ORTHO05D005693 2.3e-92 343.2 326 63.2
arahy.Tifrunner.gnm1.ann1.3IB4NC Arachis hypogaea HOM05D004645 ORTHO05D005693 3.9e-92 342.4 339 62.2
arahy.Tifrunner.gnm1.ann1.7F5N7U Arachis hypogaea HOM05D004645 ORTHO05D005693 3.9e-92 342.4 339 62.2
Ciclev10031859m.g Citrus clementina HOM05D004645 ORTHO05D005693 5.1e-92 342.0 326 63.2
CSS0029852 Camellia sinensis var. sinensis HOM05D004645 ORTHO05D005693 8.7e-92 341.3 335 62.7
CANSAT21G0324 Cannabis sativa HOM05D004645 ORTHO05D005693 8.7e-92 341.3 327 62.7
Manes.08G160200 Manihot esculenta HOM05D004645 ORTHO05D005693 1.5e-91 340.5 320 63.4
Atru.chr12.1851 Acer truncatum HOM05D004645 ORTHO05D005693 2.5e-91 339.7 328 63.4
Sp6g26710 Schrenkiella parvula HOM05D004645 ORTHO05D005693 4.3e-91 339.0 328 62.5
Potri.019G042800 Populus trichocarpa HOM05D004645 ORTHO05D005693 5.7e-91 338.6 251 70.9
RcHm_v2.0_Chr1g0384691 Rosa chinensis HOM05D004645 ORTHO05D005693 7.4e-91 338.2 314 63.7
Lsat_1_v5_gn_8_3080 Lactuca sativa HOM05D004645 ORTHO05D005693 1.3e-90 337.4 316 60.8
TWI60G0474 Tripterygium wilfordii HOM05D004645 ORTHO05D005693 1.6e-90 337.0 333 60.1
Gohir.A13G158000 Gossypium hirsutum HOM05D004645 ORTHO05D005693 4.8e-90 335.5 326 63.2
FAN10G3994 Fragaria x ananassa HOM05D004645 ORTHO05D005693 6.3e-90 335.1 314 63.4
Aa31LG11G12160 Aethionema arabicum HOM05D004645 ORTHO05D005693 1.1e-89 334.3 328 61.9
Lalb_Chr03g0037841 Lupinus albus HOM05D004645 ORTHO05D005693 1.1e-89 334.3 310 64.2
Gohir.D13G162500 Gossypium hirsutum HOM05D004645 ORTHO05D005693 1.8e-89 333.6 320 64.1
Duzib128G1942 Durio zibethinus HOM05D004645 ORTHO05D005693 2.4e-89 333.2 334 61.1
TAR629G2315 Trochodendron aralioides HOM05D004645 ORTHO05D005693 9.0e-89 331.3 329 62.9
unitig_92.g28227 Utricularia gibba HOM05D004645 ORTHO05D005693 9.0e-89 331.3 237 75.5
THA.LOC104802906 Tarenaya hassleriana HOM05D004645 ORTHO05D005693 3.4e-88 329.3 332 58.1
FvH4_7g34300 Fragaria vesca HOM05D004645 ORTHO05D005693 5.9e-88 328.6 319 61.1
HanXRQChr14g0434641 Helianthus annuus HOM05D004645 ORTHO05D005693 5.9e-88 328.6 318 60.4
PGR119G0624 Punica granatum HOM05D004645 ORTHO05D005693 7.6e-88 328.2 318 62.9
HanXRQChr11g0333681 Helianthus annuus HOM05D004645 ORTHO05D005693 1.7e-87 327.0 327 59.9
Lj5g0009502 Lotus japonicus HOM05D004645 ORTHO05D005693 2.9e-87 326.2 322 61.2
Prupe.2G329500 Prunus persica HOM05D004645 ORTHO05D005693 6.5e-87 325.1 326 60.7
SGA_v2.0_scaffold18G08211 Striga asiatica HOM05D004645 ORTHO05D005693 6.5e-87 325.1 337 63.5
Lj3C883G6 Lonicera japonica HOM05D000507 ORTHO05D000416 4.2e-86 322.4 250 71.2
TAR633G2534 Trochodendron aralioides HOM05D004645 ORTHO05D005693 3.6e-85 319.3 243 70.8
ECA238G1292 Erigeron canadensis HOM05D004645 ORTHO05D005693 7.9e-85 318.2 251 68.5
CARHR195680 Cardamine hirsuta HOM05D004645 ORTHO05D005693 3.0e-84 316.2 324 60.5
Thhalv10013879m.g Eutrema salsugineum HOM05D004645 ORTHO05D005693 8.7e-84 314.7 322 60.9
PSO782G2658 Papaver somniferum HOM05D004645 ORTHO05D005693 7.4e-83 311.6 323 60.4
Sabra19G0053400 Salix brachista HOM05D004645 ORTHO05D005693 1.6e-82 310.5 288 60.4
Lalb_Chr19g0140101 Lupinus albus HOM05D004645 ORTHO05D005693 2.8e-82 309.7 321 55.8
ClCG09G013170 Citrullus lanatus HOM05D004645 ORTHO05D005693 8.2e-82 308.1 320 59.4
FAN03G2055 Fragaria x ananassa HOM05D004645 ORTHO05D005693 8.2e-82 308.1 341 57.2
Sed0013778 Sechium edule HOM05D004645 ORTHO05D005693 8.2e-82 308.1 320 59.4
PSO063G6220 Papaver somniferum HOM05D004645 ORTHO05D005693 1.8e-81 307.0 326 59.5
Gorai.013G184600 Gossypium raimondii HOM05D004645 ORTHO05D005693 2.0e-80 303.5 322 59.9
TWI32G1082 Tripterygium wilfordii HOM05D004645 ORTHO05D005693 2.0e-80 303.5 327 57.8
MELO3C014340.2 Cucumis melo HOM05D004645 ORTHO05D005693 1.3e-79 300.8 328 57.3
TPR.G9835 Trifolium pratense HOM05D004645 ORTHO05D005693 2.7e-77 293.1 323 56.7
CsaV3_6G036830 Cucumis sativus L. HOM05D004645 ORTHO05D005693 1.0e-76 291.2 249 63.1
COL.COLO4_15124 Corchorus olitorius HOM05D004645 ORTHO05D005693 1.8e-76 290.4 217 70.5
Aqoxy5G00549 Aquilegia oxysepala HOM05D004645 ORTHO05D005693 3.0e-76 289.7 333 55.0
AUR62028214 Chenopodium quinoa HOM05D004645 ORTHO05D005693 5.1e-76 288.9 308 55.2
CDE04G1041 Ceratophyllum demersum HOM05D004645 ORTHO05D005693 8.8e-76 288.1 330 53.9
Haze_00365 Corylus avellana HOM05D004645 ORTHO05D005693 1.5e-75 287.3 210 72.4
ECA233G1188 Erigeron canadensis HOM05D004645 ORTHO05D005693 5.7e-75 285.4 235 64.7
DCAR_014580 Daucus carota HOM05D004645 ORTHO05D005693 4.8e-74 282.3 324 52.5
AUR62002096 Chenopodium quinoa HOM05D004645 ORTHO05D005693 1.8e-73 280.4 251 61.4
QL09p020526 Quercus lobata HOM05D004645 ORTHO05D005693 2.4e-73 280.0 209 72.2
DCAR_010525 Daucus carota HOM05D004645 ORTHO05D005693 3.1e-73 279.6 228 68.0
SHI15009 Sapria himalayana HOM05D004645 ORTHO05D005693 2.0e-72 276.9 336 53.9
Ca_19601_v3 Cicer arietinum L. HOM05D004645 ORTHO05D005693 4.5e-72 275.8 219 69.4
HanXRQChr05g0156891 Helianthus annuus HOM05D004645 ORTHO05D005693 1.7e-71 273.9 237 64.6
EL10Ac3g05041 Beta vulgaris HOM05D004645 ORTHO05D005693 2.5e-70 270.0 402 45.3
Thhalv10020936m.g Eutrema salsugineum HOM05D004645 ORTHO05D005693 3.2e-70 269.6 364 51.4
Aa31LG5G13980 Aethionema arabicum HOM05D000507 ORTHO05D000416 2.7e-69 266.5 248 59.3
Sc08g0005180 Simmondsia chinensis HOM05D004645 ORTHO05D005693 1.1e-67 261.2 206 71.8
vmacro06368 Vaccinium macrocarpon HOM05D004645 ORTHO05D005693 1.1e-67 261.2 227 66.5
AL3G13140 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 2.4e-65 253.4 327 54.1
Os12g0465700 Oryza sativa ssp. japonica HOM05D004645 ORTHO05D005693 2.4e-65 253.4 328 49.4
Ah.04g156130 Amaranthus hybridus HOM05D004645 ORTHO05D005693 9.1e-65 251.5 331 50.5
HPP92_006448 Vanilla planifolia HOM05D004645 ORTHO05D005693 1.7e-63 247.3 327 55.7
Carub.0003s0260 Capsella rubella HOM05D004645 ORTHO05D005693 9.4e-62 241.5 348 49.7
Lj3g0007707 Lotus japonicus HOM05D004645 ORTHO05D005693 1.2e-61 241.1 207 66.2
Sp3g02460 Schrenkiella parvula HOM05D004645 ORTHO05D005693 1.6e-61 240.7 346 50.3
Cfa016080 Carpinus fangiana HOM05D004645 ORTHO05D005693 2.3e-60 236.9 184 69.0
ATR0582G008 Amborella trichopoda HOM05D004645 ORTHO05D005693 1.5e-59 234.2 312 48.7
AT3G03460 Arabidopsis thaliana HOM05D004645 ORTHO05D005693 2.2e-58 230.3 328 51.5
BNapus_Darmor_BZH_scaffold_162p00170 Brassica napus HOM05D004645 ORTHO05D005693 1.1e-57 228.0 319 52.0
BolC1t05829H Brassica oleracea HOM05D004645 ORTHO05D005693 1.1e-57 228.0 319 52.0
A06p26400 Brassica napus HOM05D004645 ORTHO05D005693 5.9e-56 222.2 249 54.2
BNapus_Darmor_BZH_scaffold_78p00150 Brassica napus HOM05D004645 ORTHO05D005693 5.9e-56 222.2 249 54.2
BraA01t04578Z Brassica rapa HOM05D004645 ORTHO05D005693 1.3e-55 221.1 249 54.2
Rhsim03G0224700 Rhododendron simsii HOM05D004645 ORTHO05D005693 2.2e-55 220.3 338 48.2
BcaC09g47748 Brassica carinata HOM05D004645 ORTHO05D005693 4.8e-50 202.6 318 49.4
SEGI_39287 Sequoiadendron giganteum HOM05D004645 ORTHO05D005693 2.7e-48 196.8 262 43.5
HPP92_027983 Vanilla planifolia HOM05D004645 ORTHO05D005693 6.5e-47 192.2 213 59.6
FAN01G0394 Fragaria x ananassa HOM05D004645 ORTHO05D005693 2.9e-39 166.8 102 84.3
Psat7g154680 Pisum sativum HOM05D004645 ORTHO05D005693 2.3e-36 157.1 150 61.3
TAR636G0353 Trochodendron aralioides HOM05D004645 ORTHO05D005693 2.6e-35 153.7 133 67.7
CARHR077490 Cardamine hirsuta HOM05D004645 ORTHO05D005693 4.9e-34 149.4 222 48.2
HPP92_028759 Vanilla planifolia HOM05D004645 ORTHO05D005693 1.0e-28 131.7 205 44.9
AagrBONN_evm.TU.Sc2ySwM_228.1766 Anthoceros agrestis HOM05D004645 ORTHO05D005693 9.8e-27 125.2 146 45.9
Mapoly0012s0180 Marchantia polymorpha HOM05D004645 ORTHO05D005693 1.7e-26 124.4 143 43.4
Pp3c11_2710 Physcomitrium patens HOM05D004645 ORTHO05D005693 2.7e-24 117.1 131 42.7
Oeu057736.1 Olea europaea HOM05D004645 ORTHO05D005693 1.3e-23 114.8 116 58.6
Os04g0393100 Oryza sativa ssp. japonica HOM05D004645 ORTHO05D005693 3.3e-22 110.2 124 46.0
CBR_g4003 Chara braunii HOM05D004645 ORTHO05D005693 6.2e-21 105.9 149 38.9
Zm00001eb421230 Zea mays HOM05D004645 ORTHO05D005693 1.5e-19 101.3 130 40.0
Os04g0393200 Oryza sativa ssp. japonica HOM05D004645 ORTHO05D005693 2.6e-19 100.5 126 42.9
Dinv17242 Davidia involucrata HOM05D004645 ORTHO05D005693 8.6e-15 85.5 118 55.1
Actinidia04560 Actinidia chinensis HOM05D004645 ORTHO05D005693 3.3e-14 83.6 108 53.7
Psat0s904g0040 Pisum sativum HOM05D004645 ORTHO05D005693 1.1e-12 78.6 108 48.1
Cpa.g.c34419 Carica papaya HOM05D004645 ORTHO05D005693 3.4e-11 73.6 131 49.6
FAN01G2860 Fragaria x ananassa HOM05D004645 ORTHO05D005693 7.6e-11 72.4 113 49.6
Sabra13G0065800 Salix brachista HOM05D004645 ORTHO05D005693 9.9e-11 72.0 105 45.7
AL3G45560 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 2.4e-09 67.4 47 61.7
QL09p020516 Quercus lobata HOM05D004645 ORTHO05D005693 3.2e-09 67.0 33 81.8
Haze_00364 Corylus avellana HOM05D004645 ORTHO05D005693 6.0e-08 62.8 115 47.0
Os04g0392300 Oryza sativa ssp. japonica HOM05D004645 ORTHO05D005693 3.0e-07 60.5 117 36.8
HPP92_027982 Vanilla planifolia HOM05D004645 ORTHO05D005693 2.5e-06 57.4 93 49.5
ECA075G0001 Erigeron canadensis HOM05D004645 ORTHO05D005693 4.3e-06 56.6 41 70.7


User provided reference genes

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