Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 2.1e-74 282.3 152 100.0
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 7.4e-59 230.7 127 85.0
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.4e-57 225.7 126 82.5
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 9.0e-57 223.8 126 83.3
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 2.0e-56 222.6 153 73.9
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 4.5e-56 221.5 149 79.9
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.7e-55 219.5 150 76.7
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 2.2e-55 219.2 127 81.9
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 2.2e-55 219.2 149 77.2
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.8e-55 218.4 126 80.2
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 8.5e-55 217.2 149 77.2
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 1.1e-54 216.9 129 79.1
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.4e-54 216.5 126 78.6
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 1.4e-54 216.5 128 78.9
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 1.9e-54 216.1 128 79.7
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 1.9e-54 216.1 118 86.4
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.5e-54 215.7 127 78.7
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 2.5e-54 215.7 127 80.3
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 4.2e-54 214.9 127 79.5
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 5.5e-54 214.5 152 73.7
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 7.2e-54 214.2 126 80.2
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 9.4e-54 213.8 126 78.6
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 1.2e-53 213.4 125 79.2
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 1.6e-53 213.0 124 80.6
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 1.6e-53 213.0 125 79.2
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 3.6e-53 211.8 127 77.2
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 4.6e-53 211.5 127 77.2
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 4.6e-53 211.5 149 75.8
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 6.1e-53 211.1 129 78.3
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.3e-52 209.1 128 75.8
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 2.3e-52 209.1 128 78.1
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 2.3e-52 209.1 195 66.7
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 2.3e-52 209.1 149 75.2
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 3.0e-52 208.8 124 77.4
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 5.1e-52 208.0 128 75.0
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 8.8e-52 207.2 126 77.8
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 8.8e-52 207.2 150 73.3
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 8.8e-52 207.2 131 77.1
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 8.8e-52 207.2 128 74.2
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.1e-51 206.8 144 74.3
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.1e-51 206.8 126 79.4
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 2.6e-51 205.7 128 75.8
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 5.7e-51 204.5 127 74.8
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 9.7e-51 203.8 125 78.4
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 9.7e-51 203.8 127 74.8
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 3.7e-50 201.8 150 76.0
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 4.8e-50 201.4 126 74.6
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 6.3e-50 201.1 119 77.3
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 6.3e-50 201.1 119 77.3
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 1.4e-49 199.9 116 79.3
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 3.1e-49 198.7 127 73.2
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 3.1e-49 198.7 127 73.2
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 1.2e-48 196.8 151 73.5
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 2.6e-48 195.7 127 71.7
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 3.4e-48 195.3 122 77.0
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 7.7e-48 194.1 127 71.7
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 1.7e-47 193.0 117 74.4
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 2.2e-47 192.6 128 75.8
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 5.0e-47 191.4 120 72.5
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 1.4e-46 189.9 122 69.7
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 1.9e-46 189.5 100 87.0
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 7.2e-46 187.6 128 67.2
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 1.2e-45 186.8 151 64.9
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 7.9e-45 184.1 126 66.7
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 1.8e-44 183.0 128 66.4
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 3.0e-44 182.2 167 56.3
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 3.0e-44 182.2 129 69.0
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 1.1e-43 180.3 128 69.5
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.5e-43 179.9 124 68.5
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 1.5e-43 179.9 121 68.6
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 2.0e-43 179.5 127 68.5
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 2.0e-43 179.5 149 63.8
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 2.6e-43 179.1 149 65.1
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 7.4e-43 177.6 149 61.7
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 7.4e-43 177.6 125 64.8
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 9.7e-43 177.2 131 66.4
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 9.7e-43 177.2 126 67.5
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 2.8e-42 175.6 128 64.1
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 2.8e-42 175.6 128 64.8
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 3.7e-42 175.3 150 62.0
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 4.8e-42 174.9 130 65.4
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 6.3e-42 174.5 130 65.4
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 6.3e-42 174.5 130 65.4
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 6.3e-42 174.5 130 65.4
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 6.3e-42 174.5 130 65.4
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 6.3e-42 174.5 130 65.4
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 8.2e-42 174.1 132 66.7
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 8.2e-42 174.1 149 66.4
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 8.2e-42 174.1 130 66.9
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 1.1e-41 173.7 129 63.6
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.1e-41 173.7 129 65.9
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.1e-41 173.7 129 65.9
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 1.4e-41 173.3 128 62.5
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 1.8e-41 172.9 130 64.6
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 2.4e-41 172.6 129 64.3
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 9.1e-41 170.6 125 66.4
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 1.2e-40 170.2 127 66.9
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 1.6e-40 169.9 149 65.1
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 2.0e-40 169.5 129 63.6
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 2.6e-40 169.1 125 64.8
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 3.5e-40 168.7 117 68.4
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 3.5e-40 168.7 128 64.8
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 2.2e-39 166.0 118 67.8
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 3.8e-39 165.2 104 74.0
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 3.8e-39 165.2 104 74.0
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 3.8e-39 165.2 109 72.5
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 6.5e-39 164.5 127 59.8
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 6.5e-39 164.5 120 63.3
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.5e-38 163.3 98 74.5
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.5e-38 162.5 119 65.5
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 3.6e-37 158.7 128 59.4
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 3.0e-36 155.6 112 66.1
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 4.8e-34 148.3 87 78.2
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 3.5e-32 142.1 113 61.9
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 1.7e-31 139.8 84 73.8
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.5e-27 126.7 78 71.8
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 5.7e-27 124.8 101 56.4
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 2.2e-26 122.9 97 53.6
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 3.8e-23 112.1 61 82.0
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 3.8e-23 112.1 97 54.6
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 7.2e-22 107.8 101 47.5
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.8e-21 105.9 68 73.5
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 6.1e-21 104.8 117 51.3
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 2.3e-20 102.8 98 52.0
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 5.2e-20 101.7 61 72.1
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 8.8e-20 100.9 61 73.8
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.1e-17 94.0 61 68.9
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.1e-17 94.0 64 68.8
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 2.4e-17 92.8 67 68.7
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 4.1e-17 92.0 88 64.8
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 3.5e-16 89.0 57 71.9
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 5.9e-16 88.2 85 49.4
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 1.4e-12 77.0 49 71.4
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 2.0e-11 73.2 58 62.1
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 4.1e-09 65.5 48 56.2
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 5.4e-09 65.1 96 35.4
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 9.2e-09 64.3 110 27.3
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 1.3e-07 60.5 34 76.5


User provided reference genes

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