Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028635.2 Olea europaea HOM05D003874 ORTHO05D004545 9.6e-184 646.7 337 100.0
Migut.C01383 Erythranthe guttata HOM05D003874 ORTHO05D004545 6.2e-74 282.0 350 50.3
MSTRG.24132 Avicennia marina HOM05D003874 ORTHO05D004545 5.1e-68 262.3 338 46.7
SGA_v2.0_scaffold118G32614 Striga asiatica HOM05D003874 ORTHO05D004545 1.5e-67 260.8 342 49.1
MSTRG.1601 Avicennia marina HOM05D003874 ORTHO05D004545 3.3e-67 259.6 346 46.0
SGA_v2.0_scaffold24G10651 Striga asiatica HOM05D003874 ORTHO05D004545 4.0e-65 252.7 335 49.3
SalBow7G3598 Salvia bowleyana HOM05D003874 ORTHO05D004545 9.0e-65 251.5 348 48.3
Dinv22112 Davidia involucrata HOM05D003874 ORTHO05D004545 8.4e-63 245.0 345 46.7
Cc10_g08580 Coffea canephora HOM05D003874 ORTHO05D004545 2.3e-60 236.9 366 45.6
Dinv37410 Davidia involucrata HOM05D003874 ORTHO05D004545 3.0e-60 236.5 345 47.0
SalBow6G4185 Salvia bowleyana HOM05D003874 ORTHO05D004545 1.6e-58 230.7 337 45.7
MSTRG.22473 Avicennia marina HOM05D003874 ORTHO05D004545 4.0e-57 226.1 344 44.8
MD10G1004400 Malus domestica HOM05D003874 ORTHO05D004545 1.2e-56 224.6 365 41.1
Rhsim12G0002900 Rhododendron simsii HOM05D003874 ORTHO05D004545 1.5e-56 224.2 353 44.2
vmacro00941 Vaccinium macrocarpon HOM05D003874 ORTHO05D004545 3.4e-56 223.0 355 42.8
Prupe.8G006800 Prunus persica HOM05D003874 ORTHO05D004545 5.8e-56 222.2 348 44.8
TWI18G0284 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 7.6e-56 221.9 389 40.6
Cfa008075 Carpinus fangiana HOM05D003874 ORTHO05D004545 1.7e-55 220.7 370 41.6
CSS0025181 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 2.2e-55 220.3 351 44.2
SalBow1G3841 Salvia bowleyana HOM05D003874 ORTHO05D004545 2.2e-55 220.3 337 42.7
Haze_13960 Corylus avellana HOM05D003874 ORTHO05D004545 4.9e-55 219.2 381 40.4
CSS0015095 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 2.5e-54 216.9 340 43.5
CiPaw.04G009100 Carya illinoinensis HOM05D003874 ORTHO05D004545 2.5e-54 216.9 393 38.4
Potri.013G099200 Populus trichocarpa HOM05D003874 ORTHO05D004545 3.2e-54 216.5 385 41.6
CSS0009242 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 5.5e-54 215.7 340 43.5
Ciclev10020185m.g Citrus clementina HOM05D003874 ORTHO05D004545 9.3e-54 214.9 380 40.3
Sabra13G0085100 Salix brachista HOM05D003874 ORTHO05D004545 2.1e-53 213.8 363 43.0
COL.COLO4_25146 Corchorus olitorius HOM05D003874 ORTHO05D004545 3.5e-53 213.0 402 39.6
Peaxi162Scf00078g00734 Petunia axillaris HOM05D003874 ORTHO05D004545 7.9e-53 211.8 363 43.5
Duzib268G0037 Durio zibethinus HOM05D003874 ORTHO05D004545 5.1e-52 209.1 384 40.1
Oeu013912.1 Olea europaea HOM05D003874 ORTHO05D004545 8.7e-52 208.4 450 35.8
Manes.02G201800 Manihot esculenta HOM05D003874 ORTHO05D004545 1.5e-51 207.6 361 41.8
TAR628G1590 Trochodendron aralioides HOM05D003874 ORTHO05D004545 2.5e-51 206.8 372 40.9
Potri.019G071300 Populus trichocarpa HOM05D003874 ORTHO05D004545 5.7e-51 205.7 381 40.4
Thecc.08G178800 Theobroma cacao HOM05D003874 ORTHO05D004545 7.4e-51 205.3 392 41.6
FAN24G1984 Fragaria x ananassa HOM05D003874 ORTHO05D004545 9.6e-51 204.9 344 41.9
FAN20G2080 Fragaria x ananassa HOM05D003874 ORTHO05D004545 1.3e-50 204.5 347 41.5
Cpa.g.sc21.87 Carica papaya HOM05D003874 ORTHO05D004545 1.6e-50 204.1 395 38.5
MD05G1003400 Malus domestica HOM05D003874 ORTHO05D004545 1.6e-50 204.1 377 39.5
QL09p001799 Quercus lobata HOM05D003874 ORTHO05D004545 1.6e-50 204.1 377 40.3
Nitab4.5_0000980g0270 Nicotiana tabacum HOM05D003874 ORTHO05D004545 2.1e-50 203.8 353 41.4
FvH4_2g00770 Fragaria vesca HOM05D003874 ORTHO05D004545 2.8e-50 203.4 344 41.6
CANSAT21G0097 Cannabis sativa HOM05D003874 ORTHO05D004545 3.7e-50 203.0 345 42.0
Actinidia29373 Actinidia chinensis HOM05D003874 ORTHO05D004545 1.4e-49 201.1 387 39.5
RcHm_v2.0_Chr6g0251151 Rosa chinensis HOM05D003874 ORTHO05D004545 4.1e-49 199.5 350 39.7
Duzib177G0949 Durio zibethinus HOM05D003874 ORTHO05D004545 1.2e-48 198.0 382 38.7
TWI75G0660 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 1.2e-48 198.0 392 38.3
Actinidia03528 Actinidia chinensis HOM05D003874 ORTHO05D004545 1.5e-48 197.6 390 40.3
FAN27G1922 Fragaria x ananassa HOM05D003874 ORTHO05D004545 1.5e-48 197.6 347 40.6
Atru.chr13.2495 Acer truncatum HOM05D003874 ORTHO05D004545 2.6e-48 196.8 352 41.2
Atru.chr13.2507 Acer truncatum HOM05D003874 ORTHO05D004545 2.6e-48 196.8 352 41.2
Gohir.D13G118600 Gossypium hirsutum HOM05D003874 ORTHO05D004545 3.4e-48 196.4 376 40.4
Gohir.A13G115500 Gossypium hirsutum HOM05D003874 ORTHO05D004545 4.5e-48 196.1 376 40.2
Gorai.013G133000 Gossypium raimondii HOM05D003874 ORTHO05D004545 5.9e-48 195.7 376 40.2
Manes.18G116100 Manihot esculenta HOM05D003874 ORTHO05D004545 8.4e-47 191.8 383 38.4
CiPaw.03G014100 Carya illinoinensis HOM05D003874 ORTHO05D004545 3.2e-46 189.9 394 38.6
Sabra19G0083400 Salix brachista HOM05D003637 ORTHO05D004175 3.2e-46 189.9 408 36.8
Eucgr.F02945 Eucalyptus grandis HOM05D003874 ORTHO05D004545 4.2e-46 189.5 401 38.4
Nn5g27385 Nelumbo nucifera HOM05D003874 ORTHO05D004545 1.6e-45 187.6 381 38.3
Nitab4.5_0000213g0070 Nicotiana tabacum HOM05D003874 ORTHO05D004545 3.5e-45 186.4 381 38.8
ClCG05G024400 Citrullus lanatus HOM05D003874 ORTHO05D004545 1.0e-44 184.9 358 39.4
Sed0026799 Sechium edule HOM05D003874 ORTHO05D004545 1.0e-44 184.9 353 37.1
MELO3C022165.2 Cucumis melo HOM05D003874 ORTHO05D004545 6.7e-44 182.2 358 38.3
ClCG08G000760 Citrullus lanatus HOM05D003874 ORTHO05D004545 1.9e-43 180.6 355 38.3
PGSC0003DMG400008421 Solanum tuberosum HOM05D003874 ORTHO05D004545 3.3e-43 179.9 385 40.0
CDE02G0043 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 5.7e-43 179.1 351 38.2
TAR376G0450 Trochodendron aralioides HOM05D003874 ORTHO05D004545 7.4e-43 178.7 374 37.7
Nitab4.5_0000283g0160 Nicotiana tabacum HOM05D003874 ORTHO05D004545 3.7e-42 176.4 359 39.3
PGSC0003DMG400012413 Solanum tuberosum HOM05D003874 ORTHO05D004545 4.8e-42 176.0 357 40.1
CsaV3_5G039860 Cucumis sativus L. HOM05D003874 ORTHO05D004545 8.2e-42 175.3 355 36.3
DCAR_003510 Daucus carota HOM05D003874 ORTHO05D004545 1.5e-40 171.0 336 36.6
Nitab4.5_0000554g0030 Nicotiana tabacum HOM05D003874 ORTHO05D004545 1.5e-40 171.0 381 38.6
MELO3C012083.2 Cucumis melo HOM05D003874 ORTHO05D004545 2.0e-40 170.6 363 36.6
Aqoxy6G00117 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 3.4e-40 169.9 349 39.5
EL10Ac1g01274 Beta vulgaris HOM05D003874 ORTHO05D004545 3.4e-40 169.9 338 38.2
Solyc07g063050.1 Solanum lycopersicum HOM05D003874 ORTHO05D004545 4.5e-40 169.5 359 38.7
Sopen07g031240 Solanum pennellii HOM05D003874 ORTHO05D004545 4.5e-40 169.5 359 38.7
Sed0021145 Sechium edule HOM05D003874 ORTHO05D004545 1.0e-39 168.3 408 34.6
Lsat_1_v5_gn_9_75521 Lactuca sativa HOM05D003874 ORTHO05D004545 3.8e-39 166.4 343 36.4
Hma1.2p1_0016F.1_g010740 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 1.1e-38 164.9 273 40.7
Hma1.2p1_0016F.1_g010745 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 1.1e-38 164.9 273 40.7
PGR042G0135 Punica granatum HOM05D003874 ORTHO05D004545 1.4e-38 164.5 347 37.8
PSO170G4959 Papaver somniferum HOM05D003874 ORTHO05D004545 2.5e-38 163.7 371 36.7
Oeu046029.1 Olea europaea HOM05D003874 ORTHO05D004545 7.2e-38 162.2 206 48.1
Sabra13G0083800 Salix brachista HOM05D003874 ORTHO05D004545 7.2e-38 162.2 322 39.1
Lj7A419T39 Lonicera japonica HOM05D003874 ORTHO05D004545 1.8e-36 157.5 409 35.9
CDE08G0633 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 3.9e-36 156.4 365 33.7
PSO017G0683 Papaver somniferum HOM05D003874 ORTHO05D004545 3.9e-36 156.4 366 35.8
CsaV3_5G032550 Cucumis sativus L. HOM05D003874 ORTHO05D004545 8.8e-36 155.2 368 36.1
MBI03_g29107_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 1.5e-35 154.5 392 34.2
Aqoxy5G01942 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 2.0e-35 154.1 353 36.3
AT4G13530 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 2.0e-35 154.1 341 35.5
THA.LOC104808737 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 3.3e-35 153.3 354 35.9
Aa31LG9G4130 Aethionema arabicum HOM05D003874 ORTHO05D004545 9.7e-35 151.8 338 34.9
THA.LOC104821626 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 6.3e-34 149.1 345 37.1
HanXRQChr15g0484691 Helianthus annuus HOM05D003874 ORTHO05D004545 1.4e-33 147.9 335 34.6
GSVIVG01036285001 Vitis vinifera HOM05D003874 ORTHO05D004545 1.4e-33 147.9 151 53.0
Thhalv10025948m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 1.8e-33 147.5 341 35.2
CAN.G761.11 Capsicum annuum HOM05D003874 ORTHO05D004545 3.1e-33 146.7 313 38.7
DCAR_014068 Daucus carota HOM05D003874 ORTHO05D004545 3.1e-33 146.7 187 46.0
ECA232G3741 Erigeron canadensis HOM05D003874 ORTHO05D004545 3.1e-33 146.7 349 34.4
CAN.G761.10 Capsicum annuum HOM05D003874 ORTHO05D004545 4.1e-33 146.4 313 38.7
Ah.05g170390 Amaranthus hybridus HOM05D003874 ORTHO05D004545 6.9e-33 145.6 338 34.9
AUR62038535 Chenopodium quinoa HOM05D003874 ORTHO05D004545 3.4e-32 143.3 242 41.3
Carub.0007s2901 Capsella rubella HOM05D003874 ORTHO05D004545 1.7e-31 141.0 342 36.8
AL7G43110 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 6.5e-31 139.0 342 33.9
Sp7g11130 Schrenkiella parvula HOM05D003874 ORTHO05D004545 6.5e-31 139.0 334 34.4
AUR62013384 Chenopodium quinoa HOM05D003874 ORTHO05D004545 3.2e-30 136.7 245 40.8
unitig_37.g13076 Utricularia gibba HOM05D003874 ORTHO05D004545 3.2e-30 136.7 145 52.4
Hund16917 Selenicereus undatus HOM05D003874 ORTHO05D004545 5.5e-30 136.0 156 50.6
CARHR219160 Cardamine hirsuta HOM05D003874 ORTHO05D004545 7.2e-30 135.6 339 34.5
AT4G10080 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 1.6e-29 134.4 356 35.1
Thhalv10028826m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 7.9e-29 132.1 350 36.0
BcaC08g44301 Brassica carinata HOM05D003874 ORTHO05D004545 1.8e-28 131.0 348 35.1
C06p17230 Brassica napus HOM05D003874 ORTHO05D004545 2.3e-28 130.6 348 35.1
BolC6t36923H Brassica oleracea HOM05D003874 ORTHO05D004545 2.3e-28 130.6 348 35.1
BolC2t10292H Brassica oleracea HOM05D003874 ORTHO05D004545 2.0e-27 127.5 131 54.2
BcaB05g23922 Brassica carinata HOM05D003874 ORTHO05D004545 2.8e-26 123.6 353 33.4
A05p16560 Brassica napus HOM05D003874 ORTHO05D004545 2.8e-26 123.6 351 32.2
THA.LOC104813368 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 3.7e-26 123.2 254 37.4
Sp6g07450 Schrenkiella parvula HOM05D003874 ORTHO05D004545 4.8e-26 122.9 349 35.0
A02p26740 Brassica napus HOM05D003874 ORTHO05D004545 6.3e-26 122.5 346 33.5
BraA02t07678Z Brassica rapa HOM05D003874 ORTHO05D004545 6.3e-26 122.5 346 33.5
CsaV3_2G033240 Cucumis sativus L. HOM05D003874 ORTHO05D004545 8.2e-26 122.1 267 35.2
Sopen11g018310 Solanum pennellii HOM05D003874 ORTHO05D004545 7.0e-25 119.0 360 35.0
THA.LOC104806752 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 9.1e-25 118.6 395 30.4
Sc21g0007200 Simmondsia chinensis HOM05D003874 ORTHO05D004545 1.2e-24 118.2 331 35.6
BcaB01g01449 Brassica carinata HOM05D003874 ORTHO05D004545 4.5e-24 116.3 123 50.4
Carub.0006s2864 Capsella rubella HOM05D003874 ORTHO05D004545 4.5e-24 116.3 341 34.0
A09p28850 Brassica napus HOM05D003874 ORTHO05D004545 1.0e-23 115.2 180 43.3
BraA09t38447Z Brassica rapa HOM05D003874 ORTHO05D004545 1.0e-23 115.2 180 43.3
Lalb_Chr15g0080071 Lupinus albus HOM05D003874 ORTHO05D004545 1.0e-23 115.2 125 52.0
ClCG11G008410 Citrullus lanatus HOM05D003874 ORTHO05D004545 2.2e-23 114.0 177 39.5
BcaC03g16428 Brassica carinata HOM05D003874 ORTHO05D004545 3.8e-23 113.2 387 32.0
C02p42530 Brassica napus HOM05D003874 ORTHO05D004545 3.8e-23 113.2 387 32.0
arahy.Tifrunner.gnm1.ann1.GHV9B3 Arachis hypogaea HOM05D003874 ORTHO05D004545 5.5e-22 109.4 116 50.0
arahy.Tifrunner.gnm1.ann1.N113B0 Arachis hypogaea HOM05D003874 ORTHO05D004545 5.5e-22 109.4 116 50.0
AL6G43860 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 7.2e-22 109.0 335 33.4
CSS0021765 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 1.2e-21 108.2 91 65.9
BraA05t20564Z Brassica rapa HOM05D003874 ORTHO05D004545 2.1e-21 107.5 205 39.0
Lj3g0022236 Lotus japonicus HOM05D003874 ORTHO05D004545 2.1e-21 107.5 126 45.2
Ca_27532_v3 Cicer arietinum L. HOM05D003874 ORTHO05D004545 2.7e-21 107.1 126 48.4
MBI06_g14322_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 6.1e-21 105.9 270 33.7
BcaC04g21012 Brassica carinata HOM05D003874 ORTHO05D004545 8.0e-21 105.5 177 40.1
C09p36670 Brassica napus HOM05D003874 ORTHO05D004545 8.0e-21 105.5 177 40.1
BolC9t56498H Brassica oleracea HOM05D003874 ORTHO05D004545 8.0e-21 105.5 177 40.1
Aa31LG9G11920 Aethionema arabicum HOM05D003874 ORTHO05D004545 2.3e-20 104.0 387 30.0
TPR.G25536 Trifolium pratense HOM05D003874 ORTHO05D004545 4.0e-20 103.2 158 39.9
Solyc11g040300.2 Solanum lycopersicum HOM05D003874 ORTHO05D004545 1.5e-19 101.3 91 61.5
Psat5g232160 Pisum sativum HOM05D003874 ORTHO05D004545 9.7e-19 98.6 249 32.9
Medtr3g006350 Medicago truncatula HOM05D003874 ORTHO05D004545 2.2e-18 97.4 258 34.5
CARHR261100 Cardamine hirsuta HOM05D003874 ORTHO05D004545 4.8e-18 96.3 379 29.0
Glyma.06G323500 Glycine max HOM05D003874 ORTHO05D004545 3.1e-17 93.6 167 38.3
CDE07G0664 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 4.1e-17 93.2 263 31.9
Glyma.04G111000 Glycine max HOM05D003874 ORTHO05D004545 1.6e-16 91.3 127 41.7
HPP92_005639 Vanilla planifolia HOM05D000572 ORTHO05D000840 2.7e-16 90.5 331 28.1
Zm00001eb182290 Zea mays HOM05D003874 ORTHO05D004545 2.7e-16 90.5 169 34.3
VMungo1080G0642 Vigna mungo HOM05D003874 ORTHO05D004545 4.5e-16 89.7 158 38.0
Zm00001eb366050 Zea mays HOM05D003874 ORTHO05D004545 1.7e-15 87.8 156 30.1
Os02g0558500 Oryza sativa ssp. japonica HOM05D003874 ORTHO05D004545 2.2e-15 87.4 118 38.1
Phvul.005G002800 Phaseolus vulgaris HOM05D003874 ORTHO05D004545 5.0e-15 86.3 160 36.2
unitig_37.g13077 Utricularia gibba HOM05D003874 ORTHO05D030560 1.1e-14 85.1 100 45.0
CARHR261120 Cardamine hirsuta HOM05D003874 ORTHO05D004545 1.6e-13 81.3 269 30.9
HPP92_009210 Vanilla planifolia HOM05D003874 ORTHO05D004545 2.1e-13 80.9 339 27.7
Zm00001eb145550 Zea mays HOM05D003874 ORTHO05D004545 1.8e-12 77.8 131 32.1
MELO3C008094.2 Cucumis melo HOM05D003874 ORTHO05D004545 2.3e-12 77.4 478 24.9
Nn4g22326 Nelumbo nucifera HOM05D003874 ORTHO05D004545 7.5e-11 72.4 43 81.4
SalBow2G2594 Salvia bowleyana HOM05D033584 ORTHO05D030560 1.7e-10 71.2 101 44.6
SEGI_28614 Sequoiadendron giganteum HOM05D003874 ORTHO05D004545 4.8e-10 69.7 163 32.5
BcaB05g25162 Brassica carinata HOM05D003874 ORTHO05D004545 5.4e-09 66.2 261 29.5


User provided reference genes

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