Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 1.6e-239 832.4 428 100.0
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 9.0e-195 683.7 417 84.7
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 2.2e-193 679.1 417 82.3
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 3.8e-193 678.3 428 82.9
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 6.4e-193 677.6 402 86.8
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 2.4e-192 675.6 428 80.6
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 4.2e-192 674.9 417 82.0
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 5.5e-192 674.5 428 80.4
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 9.3e-192 673.7 411 83.0
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 2.3e-190 669.1 426 79.6
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 2.3e-190 669.1 414 84.3
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 1.5e-189 666.4 425 81.2
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 3.3e-189 665.2 412 83.3
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 3.3e-189 665.2 428 82.0
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 9.6e-189 663.7 424 82.3
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 1.6e-188 662.9 412 81.6
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 2.8e-188 662.1 417 83.2
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 4.8e-188 661.4 417 79.6
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 4.8e-188 661.4 412 83.3
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 1.1e-187 660.2 430 79.1
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 1.1e-187 660.2 417 80.1
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 1.4e-187 659.8 423 81.1
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 1.8e-187 659.4 417 82.3
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 1.8e-187 659.4 419 81.1
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 3.1e-187 658.7 425 79.1
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 6.9e-187 657.5 425 80.2
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 6.9e-187 657.5 420 81.2
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.2e-186 656.8 425 78.6
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 2.0e-186 656.0 423 80.9
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 2.0e-186 656.0 444 77.5
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 2.6e-186 655.6 425 80.0
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 4.5e-186 654.8 426 80.3
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 4.5e-186 654.8 414 80.0
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 5.8e-186 654.4 399 84.5
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 5.8e-186 654.4 430 80.2
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 5.8e-186 654.4 414 82.1
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 1.7e-185 652.9 417 81.3
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 1.7e-185 652.9 412 81.8
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 2.2e-185 652.5 425 80.0
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.1e-184 650.2 415 79.3
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 1.1e-184 650.2 412 81.1
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 1.1e-184 650.2 412 82.5
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 4.2e-184 648.3 427 80.3
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 5.5e-184 647.9 425 79.1
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 7.1e-184 647.5 430 79.5
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 7.1e-184 647.5 412 80.8
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 7.1e-184 647.5 402 83.6
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 9.3e-184 647.1 420 81.2
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 2.1e-183 646.0 412 81.8
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 2.7e-183 645.6 425 78.4
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 1.0e-182 643.7 425 78.1
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 1.0e-182 643.7 425 78.1
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 2.3e-182 642.5 427 79.2
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 2.3e-182 642.5 412 81.3
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 2.3e-182 642.5 412 81.3
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 3.0e-182 642.1 416 78.8
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 8.7e-182 640.6 395 83.8
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 2.5e-181 639.0 412 81.1
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 4.3e-181 638.3 426 78.9
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 5.7e-181 637.9 412 78.4
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 9.7e-181 637.1 412 80.6
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 1.3e-180 636.7 416 78.4
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.6e-180 636.3 414 78.0
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 2.2e-180 636.0 416 77.4
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 8.2e-180 634.0 426 75.8
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 1.1e-179 633.6 425 77.2
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 1.4e-179 633.3 425 77.2
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 3.1e-179 632.1 416 77.6
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 2.0e-178 629.4 416 77.9
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 3.4e-178 628.6 415 77.6
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 4.5e-178 628.2 431 75.4
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 7.7e-178 627.5 415 77.3
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 1.7e-177 626.3 412 77.7
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 2.2e-177 625.9 326 93.6
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 2.2e-177 625.9 416 76.9
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 2.9e-177 625.5 395 80.3
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 3.8e-177 625.2 411 77.4
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 3.8e-177 625.2 328 93.0
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 3.8e-177 625.2 416 76.9
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 5.0e-177 624.8 328 92.4
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 1.1e-176 623.6 423 76.1
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 1.4e-176 623.2 428 77.8
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 3.2e-176 622.1 395 78.7
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 4.2e-176 621.7 432 74.8
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 3.6e-175 618.6 327 91.7
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.4e-174 616.7 416 76.4
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 1.1e-173 613.6 320 93.1
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 1.5e-173 613.2 412 79.4
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 9.7e-173 610.5 414 79.7
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 1.7e-172 609.8 427 73.8
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 2.2e-172 609.4 426 73.7
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 6.9e-171 604.4 428 77.8
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.0e-170 602.8 416 75.0
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 3.4e-170 602.1 416 74.8
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 7.7e-170 600.9 414 73.9
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 1.0e-169 600.5 416 74.8
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 1.3e-169 600.1 418 74.6
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.3e-169 600.1 418 74.6
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 2.5e-168 595.9 424 73.1
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 9.4e-168 594.0 420 72.9
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 7.9e-167 590.9 414 72.7
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 1.7e-164 583.2 422 71.3
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 1.8e-163 579.7 315 89.5
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 1.2e-162 577.0 405 72.6
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 1.3e-161 573.5 426 68.5
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 1.3e-161 573.5 409 69.9
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 1.1e-160 570.5 424 67.9
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 9.4e-160 567.4 415 73.3
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 1.2e-159 567.0 415 73.3
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 1.4e-158 563.5 417 67.9
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 1.1e-157 560.5 420 68.6
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 2.0e-157 559.7 391 70.8
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 7.0e-155 551.2 420 68.1
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 2.4e-147 526.2 349 76.8
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 5.3e-147 525.0 401 72.6
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 5.3e-147 525.0 283 90.5
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 1.2e-141 507.3 341 74.5
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 9.5e-136 487.6 325 72.6
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 1.6e-135 486.9 327 72.5
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 1.0e-134 484.2 327 71.9
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 8.9e-134 481.1 327 71.6
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.2e-133 480.7 327 71.9
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 4.4e-133 478.8 327 72.2
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.7e-132 476.9 327 70.9
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 1.4e-131 473.8 325 71.4
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 1.4e-131 473.8 325 71.4
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 1.4e-131 473.8 325 71.4
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 7.0e-131 471.5 335 72.2
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 3.5e-130 469.2 327 70.6
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 2.3e-129 466.5 327 70.0
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 1.2e-127 460.7 298 77.9
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 5.2e-126 455.3 348 69.3
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 9.8e-117 424.5 332 60.5
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 2.9e-116 422.9 330 61.5
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 1.4e-115 420.6 304 72.7
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 1.9e-115 420.2 312 66.7
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 5.1e-113 412.1 282 71.3
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 4.3e-112 409.1 306 73.5
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 4.9e-108 395.6 224 87.5
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 1.6e-106 390.6 334 65.6
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 5.6e-88 328.9 258 69.4
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 4.9e-76 289.3 234 65.0
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 1.5e-72 277.7 192 72.4
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 3.2e-67 260.0 201 63.2
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 9.0e-62 241.9 276 49.3
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 2.8e-55 220.3 219 54.8
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 8.2e-55 218.8 277 47.7
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 1.8e-54 217.6 123 82.1
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 2.2e-52 210.7 219 53.0
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 7.2e-51 205.7 326 38.3
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 7.0e-46 189.1 148 66.9
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 2.6e-45 187.2 215 49.3
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 5.0e-44 183.0 101 85.1
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 5.0e-44 183.0 100 89.0
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 4.2e-43 179.9 200 49.5
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 7.2e-43 179.1 104 84.6
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 4.7e-42 176.4 101 82.2
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 1.4e-41 174.9 215 48.4
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 3.7e-39 166.8 199 53.3
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 7.0e-38 162.5 100 78.0
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 2.0e-37 161.0 77 96.1
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 1.1e-35 155.2 218 39.0
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 2.5e-35 154.1 122 68.0
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.6e-34 151.4 135 63.0
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 9.8e-32 142.1 76 84.2
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 2.0e-29 134.4 72 93.1
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 7.5e-24 115.9 74 77.0
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 2.9e-20 104.0 106 55.7
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 1.5e-19 101.7 202 36.6
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 7.0e-14 82.8 49 81.6
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 1.3e-12 78.6 131 43.5
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 1.3e-12 78.6 131 43.5
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 1.5e-11 75.1 53 66.0
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 1.5e-08 65.1 59 61.0
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.5e-08 65.1 36 86.1
Sp6g37550 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.1e-06 58.9 66 53.0


User provided reference genes

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