Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028553.1 Olea europaea HOM05D004345 ORTHO05D005192 8.3e-79 297.0 150 100.0
Oeu011014.1 Olea europaea HOM05D004345 ORTHO05D005192 4.3e-75 284.6 150 94.7
MSTRG.24391 Avicennia marina HOM05D004345 ORTHO05D005192 1.7e-31 139.8 148 53.4
Migut.N02797 Erythranthe guttata HOM05D004345 ORTHO05D005192 3.0e-28 129.0 149 49.0
SalBow3G2318 Salvia bowleyana HOM05D004345 ORTHO05D005192 3.1e-25 119.0 149 50.3
Cc07_g15690 Coffea canephora HOM05D004345 ORTHO05D005192 2.7e-21 105.9 152 41.4
Solyc01g098450.4 Solanum lycopersicum HOM05D004345 ORTHO05D005192 3.7e-18 95.5 144 41.0
Sopen01g042020 Solanum pennellii HOM05D004345 ORTHO05D005192 1.4e-17 93.6 144 40.3
Peaxi162Scf00434g00066 Petunia axillaris HOM05D004345 ORTHO05D005192 3.1e-17 92.4 143 37.8
unitig_744.g24116 Utricularia gibba HOM05D004345 ORTHO05D005192 3.1e-17 92.4 132 43.9
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 1.2e-16 90.5 166 36.1
PGSC0003DMG403028564 Solanum tuberosum HOM05D004345 ORTHO05D005192 1.2e-16 90.5 144 39.6
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 3.4e-16 89.0 148 39.2
Nitab4.5_0008354g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 7.6e-16 87.8 142 40.8
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 1.3e-15 87.0 149 36.9
Ciclev10000213m.g Citrus clementina HOM05D004345 ORTHO05D005192 1.7e-15 86.7 146 39.7
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 2.9e-15 85.9 128 39.1
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 1.4e-14 83.6 150 38.7
CANSAT21G1743 Cannabis sativa HOM05D004345 ORTHO05D005192 5.5e-14 81.6 146 34.2
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 7.2e-14 81.3 149 34.2
RcHm_v2.0_Chr7g0216331 Rosa chinensis HOM05D004345 ORTHO05D005192 9.3e-14 80.9 148 36.5
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 1.2e-13 80.5 140 35.0
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 3.6e-13 79.0 149 36.9
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 4.6e-13 78.6 150 38.0
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 6.1e-13 78.2 140 35.0
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 6.1e-13 78.2 140 35.7
CiPaw.12G040000 Carya illinoinensis HOM05D004345 ORTHO05D005192 1.0e-12 77.4 149 33.6
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 1.4e-12 77.0 164 34.1
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 2.3e-12 76.3 142 40.8
CSS0030547 Camellia sinensis var. sinensis HOM05D004345 ORTHO05D005192 3.0e-12 75.9 128 39.1
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 3.0e-12 75.9 149 36.2
Lsat_1_v5_gn_8_70480 Lactuca sativa HOM05D004345 ORTHO05D005192 6.7e-12 74.7 150 31.3
Nitab4.5_0001423g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 6.7e-12 74.7 148 35.8
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 1.1e-11 73.9 149 34.9
COL.COLO4_14552 Corchorus olitorius HOM05D004345 ORTHO05D005192 1.1e-11 73.9 144 36.1
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 1.5e-11 73.6 140 33.6
Rhsim12G0029000 Rhododendron simsii HOM05D004345 ORTHO05D005192 1.5e-11 73.6 113 44.2
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 1.9e-11 73.2 126 37.3
TWI31G0574 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 2.5e-11 72.8 148 33.1
Lalb_Chr21g0307461 Lupinus albus HOM05D004345 ORTHO05D005192 4.3e-11 72.0 149 32.2
Lj5g0026700 Lotus japonicus HOM05D004345 ORTHO05D005192 5.7e-11 71.6 141 36.2
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 7.4e-11 71.2 151 36.4
Aqoxy4G03088 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 9.7e-11 70.9 149 32.2
TPR.G10330 Trifolium pratense HOM05D004345 ORTHO05D005192 9.7e-11 70.9 141 35.5
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 9.7e-11 70.9 152 35.5
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 1.7e-10 70.1 148 33.8
vmacro01076 Vaccinium macrocarpon HOM05D004345 ORTHO05D005192 1.7e-10 70.1 107 43.9
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 2.2e-10 69.7 146 31.5
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 2.2e-10 69.7 137 33.6
Glyma.10G030100 Glycine max HOM05D004345 ORTHO05D005192 2.2e-10 69.7 146 33.6
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 2.8e-10 69.3 149 34.2
RcHm_v2.0_Chr6g0264731 Rosa chinensis HOM05D004345 ORTHO05D005192 4.8e-10 68.6 142 33.8
Aqoxy4G01527 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 8.2e-10 67.8 150 32.7
Cpa.g.sc3060.1 Carica papaya HOM05D004345 ORTHO05D005192 1.1e-09 67.4 150 30.0
Cpa.g.sc4881.1 Carica papaya HOM05D004345 ORTHO05D005192 1.1e-09 67.4 150 30.0
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 1.1e-09 67.4 137 32.8
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 5.3e-09 65.1 154 31.8
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 6.9e-09 64.7 146 31.5
Dinv35989 Davidia involucrata HOM05D004345 ORTHO05D004155 9.1e-09 64.3 107 37.4
Dinv36001 Davidia involucrata HOM05D004345 ORTHO05D005192 9.1e-09 64.3 107 37.4
VMungo1127G1998 Vigna mungo HOM05D004345 ORTHO05D005192 1.5e-08 63.5 136 33.1
Ca_09724_v3 Cicer arietinum L. HOM05D004345 ORTHO05D005192 2.0e-08 63.2 138 32.6
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 2.6e-08 62.8 142 33.1
VMungo1215G1527 Vigna mungo HOM05D004345 ORTHO05D005192 2.6e-08 62.8 136 34.6
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 7.7e-08 61.2 144 33.3
Nitab4.5_0001903g0100 Nicotiana tabacum HOM05D004345 ORTHO05D005192 1.0e-07 60.8 113 40.7
MBI07_g37626_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 2.2e-07 59.7 142 31.7
Eucgr.C04176 Eucalyptus grandis HOM05D004345 ORTHO05D005192 5.0e-07 58.5 146 27.4
MBI07_g11743_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 5.0e-07 58.5 79 40.5
PSO210G0382 Papaver somniferum HOM05D004345 ORTHO05D005192 1.4e-06 57.0 134 34.3
PSO210G0907 Papaver somniferum HOM05D004345 ORTHO05D005192 1.9e-06 56.6 145 33.1
Sc14g0004510 Simmondsia chinensis HOM05D004345 ORTHO05D005192 7.2e-06 54.7 117 29.9


User provided reference genes

Program Settings