Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028546.1 Olea europaea HOM05D001404 ORTHO05D009009 4.1e-228 794.3 373 100.0
CSS0043132 Camellia sinensis var. sinensis HOM05D001404 ORTHO05D002309 1.2e-155 553.5 377 70.3
MSTRG.7858 Avicennia marina HOM05D001404 ORTHO05D009009 8.2e-152 540.8 375 67.5
SalBow2G3155 Salvia bowleyana HOM05D001404 ORTHO05D009009 1.5e-150 536.6 375 66.9
Actinidia08188 Actinidia chinensis HOM05D001404 ORTHO05D009009 2.0e-150 536.2 378 67.5
Migut.L01385 Erythranthe guttata HOM05D001404 ORTHO05D009009 2.6e-150 535.8 374 66.6
PGSC0003DMG401022613 Solanum tuberosum HOM05D001404 ORTHO05D009009 1.2e-147 526.9 377 66.8
CAN.G159.8 Capsicum annuum HOM05D001404 ORTHO05D009009 4.7e-147 525.0 377 66.0
Sopen05g002340 Solanum pennellii HOM05D001404 ORTHO05D009009 1.4e-146 523.5 377 66.3
Solyc05g006410.3 Solanum lycopersicum HOM05D001404 ORTHO05D009009 1.1e-145 520.4 377 66.0
GSVIVG01020147001 Vitis vinifera HOM05D001404 ORTHO05D009009 3.3e-145 518.8 377 64.7
SalBow2G3257 Salvia bowleyana HOM05D001404 ORTHO05D009009 3.7e-144 515.4 375 65.3
Peaxi162Scf00828g00020 Petunia axillaris HOM05D001404 ORTHO05D009009 3.1e-143 512.3 375 65.3
Thecc.02G239700 Theobroma cacao HOM05D001404 ORTHO05D009009 1.2e-142 510.4 378 64.6
vmacro01204 Vaccinium macrocarpon HOM05D001404 ORTHO05D009009 3.8e-141 505.4 400 61.8
Nitab4.5_0003602g0020 Nicotiana tabacum HOM05D001404 ORTHO05D009009 8.5e-141 504.2 419 58.7
Ciclev10031837m.g Citrus clementina HOM05D001404 ORTHO05D009009 1.5e-140 503.4 385 63.4
Cc11_g14260 Coffea canephora HOM05D001404 ORTHO05D009009 1.5e-140 503.4 377 64.7
Duzib268G0371 Durio zibethinus HOM05D001404 ORTHO05D009009 1.5e-140 503.4 378 63.2
Gohir.A03G143500 Gossypium hirsutum HOM05D001404 ORTHO05D009009 7.2e-140 501.1 378 63.5
Gorai.005G187100 Gossypium raimondii HOM05D001404 ORTHO05D009009 1.6e-139 500.0 378 63.5
QL03p067270 Quercus lobata HOM05D001404 ORTHO05D009009 2.6e-137 492.7 376 62.5
Potri.010G037600 Populus trichocarpa HOM05D001404 ORTHO05D009009 5.7e-137 491.5 386 62.7
TAR374G0908 Trochodendron aralioides HOM05D001404 ORTHO05D009009 1.3e-136 490.3 378 61.9
AT1G70150 Arabidopsis thaliana HOM05D001404 ORTHO05D009009 3.7e-136 488.8 377 61.5
Lalb_Chr05g0217271 Lupinus albus HOM05D001404 ORTHO05D009009 1.8e-135 486.5 376 60.1
SGA_v2.0_scaffold8G04270 Striga asiatica HOM05D001404 ORTHO05D009009 3.1e-135 485.7 386 62.4
Aa31LG4G10750 Aethionema arabicum HOM05D001404 ORTHO05D009009 5.3e-135 485.0 399 60.2
CARHR063240 Cardamine hirsuta HOM05D001404 ORTHO05D002309 7.0e-135 484.6 376 61.4
Sp5g25260 Schrenkiella parvula HOM05D001404 ORTHO05D009009 7.0e-135 484.6 379 61.5
AL2G29430 Arabidopsis lyrata HOM05D001404 ORTHO05D009009 2.7e-134 482.6 379 61.5
CiPaw.05G145400 Carya illinoinensis HOM05D001404 ORTHO05D009009 5.9e-134 481.5 377 62.6
Thhalv10018717m.g Eutrema salsugineum HOM05D001404 ORTHO05D009009 7.7e-134 481.1 379 60.7
Lj6A799T78 Lonicera japonica HOM05D001404 ORTHO05D009009 1.0e-133 480.7 382 61.8
Glyma.01G037400 Glycine max HOM05D001404 ORTHO05D009009 1.3e-133 480.3 381 60.4
BraA07t31231Z Brassica rapa HOM05D001404 ORTHO05D009009 8.5e-133 477.6 381 60.9
RcHm_v2.0_Chr4g0444821 Rosa chinensis HOM05D001404 ORTHO05D009009 8.5e-133 477.6 376 59.8
VMungo1215G3058 Vigna mungo HOM05D001404 ORTHO05D009009 1.9e-132 476.5 378 61.1
A07p36630 Brassica napus HOM05D001404 ORTHO05D009009 3.2e-132 475.7 381 60.4
HanXRQChr17g0570291 Helianthus annuus HOM05D001404 ORTHO05D009009 4.2e-132 475.3 377 61.8
Lj2g0007192 Lotus japonicus HOM05D001404 ORTHO05D009009 9.4e-132 474.2 377 59.9
THA.LOC104822951 Tarenaya hassleriana HOM05D001404 ORTHO05D009009 9.4e-132 474.2 376 60.1
PGR119G0405 Punica granatum HOM05D001404 ORTHO05D009009 4.7e-131 471.9 376 60.9
MD16G1084700 Malus domestica HOM05D001404 ORTHO05D009009 8.0e-131 471.1 376 59.6
Carub.0002s1684 Capsella rubella HOM05D001404 ORTHO05D009009 1.0e-130 470.7 379 60.4
Manes.01G195300 Manihot esculenta HOM05D001404 ORTHO05D009009 1.0e-130 470.7 377 60.5
Prupe.1G261400 Prunus persica HOM05D001404 ORTHO05D009009 1.0e-130 470.7 376 59.3
Rhsim12G0051800 Rhododendron simsii HOM05D001404 ORTHO05D009009 1.4e-130 470.3 468 52.1
Sc14g0008480 Simmondsia chinensis HOM05D001355 ORTHO05D003368 1.8e-130 469.9 377 58.9
FAN12G1952 Fragaria x ananassa HOM05D001404 ORTHO05D009009 6.8e-130 468.0 379 59.1
C06p44030 Brassica napus HOM05D001404 ORTHO05D009009 5.7e-129 464.9 381 60.1
BolC6t39476H Brassica oleracea HOM05D001404 ORTHO05D009009 5.7e-129 464.9 381 60.1
Lsat_1_v5_gn_4_6141 Lactuca sativa HOM05D001404 ORTHO05D009009 5.7e-129 464.9 362 61.9
Sed0021588 Sechium edule HOM05D001404 ORTHO05D009009 1.3e-128 463.8 405 55.1
Ca_24163_v3 Cicer arietinum L. HOM05D001404 ORTHO05D002309 2.8e-128 462.6 376 59.0
Psat2g112600 Pisum sativum HOM05D001404 ORTHO05D009009 4.8e-128 461.8 377 58.1
TWI36G0457 Tripterygium wilfordii HOM05D001404 ORTHO05D009009 4.8e-128 461.8 406 57.1
COL.COLO4_36283 Corchorus olitorius HOM05D001404 ORTHO05D002309 8.3e-128 461.1 361 63.2
FAN07G0845 Fragaria x ananassa HOM05D001404 ORTHO05D009009 8.3e-128 461.1 384 57.0
FvH4_4g35220 Fragaria vesca HOM05D001404 ORTHO05D009009 1.4e-127 460.3 385 58.4
Eucgr.B02570 Eucalyptus grandis HOM05D001404 ORTHO05D009009 7.0e-127 458.0 377 58.1
Aqoxy3G00874 Aquilegia oxysepala HOM05D001404 ORTHO05D009009 1.2e-126 457.2 380 56.8
FAN22G1682 Fragaria x ananassa HOM05D001404 ORTHO05D009009 1.2e-126 457.2 384 57.0
Medtr5g036470 Medicago truncatula HOM05D001404 ORTHO05D009009 1.2e-126 457.2 377 59.2
arahy.Tifrunner.gnm1.ann1.2TJ8DU Arachis hypogaea HOM05D001404 ORTHO05D009009 2.3e-125 453.0 394 57.6
SHI05275 Sapria himalayana HOM05D001404 ORTHO05D009009 5.0e-125 451.8 377 58.9
PSO161G0115 Papaver somniferum HOM05D001404 ORTHO05D009009 2.1e-123 446.4 380 58.4
BcaC08g46464 Brassica carinata HOM05D001404 ORTHO05D009009 1.8e-122 443.4 384 58.3
Cpa.g.sc1960.1 Carica papaya HOM05D001404 ORTHO05D009009 2.3e-122 443.0 347 62.2
Nitab4.5_0002312g0090 Nicotiana tabacum HOM05D001404 ORTHO05D009009 6.8e-122 441.4 333 63.4
CANSAT01G0136 Cannabis sativa HOM05D001404 ORTHO05D009009 9.8e-121 437.6 379 57.3
Nn4g22934 Nelumbo nucifera HOM05D001404 ORTHO05D009009 2.2e-120 436.4 344 61.6
ECA234G1431 Erigeron canadensis HOM05D001404 ORTHO05D002309 8.3e-120 434.5 361 59.3
EL10Ac6g13111 Beta vulgaris HOM05D001404 ORTHO05D009009 5.9e-118 428.3 381 53.8
Hund25295 Selenicereus undatus HOM05D001404 ORTHO05D009009 8.6e-117 424.5 375 56.3
CDE10G0936 Ceratophyllum demersum HOM05D001404 ORTHO05D009009 2.8e-115 419.5 376 56.6
ClCG05G024960 Citrullus lanatus HOM05D001404 ORTHO05D009009 8.0e-115 417.9 347 58.2
Gohir.D02G166800 Gossypium hirsutum HOM05D001404 ORTHO05D009009 1.1e-111 407.5 316 62.0
Haze_12124 Corylus avellana HOM05D001404 ORTHO05D002309 1.2e-110 404.1 348 58.6
Os07g0481000 Oryza sativa ssp. japonica HOM05D001404 ORTHO05D009009 2.5e-108 396.4 378 52.4
Sabra10G0028400 Salix brachista HOM05D001404 ORTHO05D009009 2.0e-105 386.7 338 55.9
arahy.Tifrunner.gnm1.ann1.VUK41S Arachis hypogaea HOM05D001404 ORTHO05D009009 2.4e-103 379.8 379 50.9
CsaV3_5G031930 Cucumis sativus L. HOM05D001404 ORTHO05D009009 3.5e-102 375.9 308 57.8
Dinv24916 Davidia involucrata HOM05D001404 ORTHO05D009009 3.9e-101 372.5 274 64.6
TPR.G17319 Trifolium pratense HOM05D001404 ORTHO05D009009 2.6e-97 359.8 352 51.7
unitig_749.g13260 Utricularia gibba HOM05D001404 ORTHO05D009009 5.4e-95 352.1 396 46.0
Zm00001eb321400 Zea mays HOM05D001404 ORTHO05D009009 2.1e-91 340.1 378 46.8
AagrBONN_evm.TU.Sc2ySwM_368.625 Anthoceros agrestis HOM05D001404 ORTHO05D009009 1.1e-90 337.8 392 44.9
Phvul.002G076800 Phaseolus vulgaris HOM05D001404 ORTHO05D009009 4.0e-90 335.9 283 57.2
AUR62026309 Chenopodium quinoa HOM05D001404 ORTHO05D009009 3.4e-89 332.8 385 44.7
FAN17G2278 Fragaria x ananassa HOM05D001404 ORTHO05D009009 3.8e-88 329.3 240 64.2
HPP92_002468 Vanilla planifolia HOM05D001404 ORTHO05D009009 3.2e-87 326.2 305 53.1
Glyma.02G027500 Glycine max HOM05D001404 ORTHO05D009009 6.0e-86 322.0 265 59.2
Pp3c9_21180 Physcomitrium patens HOM05D001404 ORTHO05D009009 8.7e-85 318.2 379 45.1
SalBow2G0480 Salvia bowleyana HOM05D001404 ORTHO05D009009 3.6e-83 312.8 304 52.6
Mapoly0056s0134 Marchantia polymorpha HOM05D001404 ORTHO05D009009 2.0e-81 307.0 375 42.7
Lj4g0012021 Lotus japonicus HOM05D001404 ORTHO05D009009 1.2e-73 281.2 376 41.0
SMO091G0008 Selaginella moellendorffii HOM05D001404 ORTHO05D009009 2.4e-71 273.5 374 41.4
SMO238G0008 Selaginella moellendorffii HOM05D001404 ORTHO05D009009 4.6e-70 269.2 353 43.9
ATR0712G045 Amborella trichopoda HOM05D001404 ORTHO05D009009 6.4e-64 248.8 216 54.6
CBR_g72156 Chara braunii HOM05D001404 ORTHO05D009009 7.9e-46 188.7 306 36.9
Atru.chr11.1937 Acer truncatum HOM05D001404 ORTHO05D002309 4.2e-39 166.4 116 66.4
EL10Ac8g20029 Beta vulgaris HOM05D007895 ORTHO05D010017 4.7e-38 162.9 372 31.7
AagrBONN_evm.TU.Sc2ySwM_117.3222 Anthoceros agrestis HOM05D007895 ORTHO05D010017 2.0e-36 157.5 378 29.9
Hma1.2p1_0057F.1_g031900 Hydrangea macrophylla HOM05D007895 ORTHO05D010017 2.0e-36 157.5 373 31.9
FvH4_3g02321 Fragaria vesca HOM05D007895 ORTHO05D010017 5.7e-36 156.0 367 32.4
Glyma.13G205700 Glycine max HOM05D007895 ORTHO05D010017 1.3e-35 154.8 368 33.4
Glyma.15G106800 Glycine max HOM05D007895 ORTHO05D010017 1.7e-35 154.5 375 32.8
Phvul.006G150500 Phaseolus vulgaris HOM05D007895 ORTHO05D010017 2.2e-35 154.1 368 33.4
VMungo0540G0331 Vigna mungo HOM05D007895 ORTHO05D010017 3.7e-35 153.3 368 33.4
Cfa000239 Carpinus fangiana HOM05D007895 ORTHO05D010017 4.8e-35 152.9 371 32.3
TWI63G1238 Tripterygium wilfordii HOM05D007895 ORTHO05D010017 6.3e-35 152.5 371 33.2
Oeu033195.1 Olea europaea HOM05D007895 ORTHO05D010017 8.2e-35 152.1 371 32.6
SMO351G0184 Selaginella moellendorffii HOM05D007895 ORTHO05D010017 8.2e-35 152.1 370 30.5
Gohir.D05G172500 Gossypium hirsutum HOM05D007895 ORTHO05D010017 1.1e-34 151.8 379 32.5
Gorai.009G177700 Gossypium raimondii HOM05D007895 ORTHO05D010017 1.1e-34 151.8 379 32.5
CAN.G569.16 Capsicum annuum HOM05D007895 ORTHO05D010017 1.4e-34 151.4 371 30.7
AagrBONN_evm.TU.Sc2ySwM_117.3431 Anthoceros agrestis HOM05D001404 ORTHO05D009009 1.8e-34 151.0 151 49.7
Lj6g0014344 Lotus japonicus HOM05D007895 ORTHO05D010017 1.8e-34 151.0 368 33.4
Potri.011G001800 Populus trichocarpa HOM05D007895 ORTHO05D010017 3.1e-34 150.2 377 32.1
SalBow7G1134 Salvia bowleyana HOM05D001404 ORTHO05D009009 3.1e-34 150.2 125 58.4
Thecc.06G218400 Theobroma cacao HOM05D007895 ORTHO05D010017 7.0e-34 149.1 378 31.5
Gohir.A05G169300 Gossypium hirsutum HOM05D007895 ORTHO05D010017 9.1e-34 148.7 372 32.5
Manes.17G037900 Manihot esculenta HOM05D007895 ORTHO05D010017 1.2e-33 148.3 371 32.1
Ciclev10017921m.g Citrus clementina HOM05D007895 ORTHO05D010017 2.0e-33 147.5 370 32.7
COL.COLO4_31754 Corchorus olitorius HOM05D007895 ORTHO05D010017 2.0e-33 147.5 378 31.7
Duzib235G1140 Durio zibethinus HOM05D007895 ORTHO05D010017 2.0e-33 147.5 378 31.2
MD10G1319500 Malus domestica HOM05D007895 ORTHO05D010017 2.0e-33 147.5 371 32.6
Mapoly0063s0045 Marchantia polymorpha HOM05D007895 ORTHO05D010017 2.6e-33 147.1 381 30.4
TPR.G7647 Trifolium pratense HOM05D007895 ORTHO05D010017 2.6e-33 147.1 368 33.2
TAR627G0668 Trochodendron aralioides HOM05D007895 ORTHO05D010017 2.6e-33 147.1 371 31.5
QL05p073549 Quercus lobata HOM05D007895 ORTHO05D010017 3.4e-33 146.7 394 31.2
QL05p073789 Quercus lobata HOM05D007895 ORTHO05D010017 3.4e-33 146.7 394 31.2
Rhsim13G0155200 Rhododendron simsii HOM05D007895 ORTHO05D010017 4.5e-33 146.4 374 31.8
BcaNung02255 Brassica carinata HOM05D007895 ORTHO05D010017 5.9e-33 146.0 370 29.2
Nitab4.5_0003254g0060 Nicotiana tabacum HOM05D007895 ORTHO05D010017 5.9e-33 146.0 370 30.8
RcHm_v2.0_Chr5g0003541 Rosa chinensis HOM05D007895 ORTHO05D010017 5.9e-33 146.0 367 31.9
CSS0036667 Camellia sinensis var. sinensis HOM05D007895 ORTHO05D010017 7.7e-33 145.6 370 32.7
Aqoxy1G03251 Aquilegia oxysepala HOM05D007895 ORTHO05D010017 1.0e-32 145.2 372 31.5
Prupe.4G023000 Prunus persica HOM05D007895 ORTHO05D010017 1.0e-32 145.2 377 32.4
Dinv13880 Davidia involucrata HOM05D007895 ORTHO05D010017 1.3e-32 144.8 350 32.9
Psat1g181720 Pisum sativum HOM05D007895 ORTHO05D010017 1.7e-32 144.4 367 32.2
BcaC09g51191 Brassica carinata HOM05D007895 ORTHO05D010017 2.2e-32 144.1 368 28.8
C01p15890 Brassica napus HOM05D007895 ORTHO05D010017 2.2e-32 144.1 368 28.8
ATR0752G052 Amborella trichopoda HOM05D007895 ORTHO05D010017 2.9e-32 143.7 374 30.5
PGR004G2409 Punica granatum HOM05D007895 ORTHO05D010017 3.8e-32 143.3 370 31.6
MD05G1343800 Malus domestica HOM05D007895 ORTHO05D010017 5.0e-32 142.9 370 31.6
BraA01t01263Z Brassica rapa HOM05D007895 ORTHO05D010017 6.5e-32 142.5 370 28.6
MBI18_g12452_MAGBIO Magnolia biondii HOM05D007895 ORTHO05D010017 6.5e-32 142.5 369 30.1
BolC1t01543H Brassica oleracea HOM05D007895 ORTHO05D010017 8.5e-32 142.1 370 28.9
Sp7g20040 Schrenkiella parvula HOM05D007895 ORTHO05D010017 8.5e-32 142.1 370 28.6
Ah.09g235010 Amaranthus hybridus HOM05D007895 ORTHO05D010017 1.1e-31 141.7 364 31.0
Nitab4.5_0007482g0010 Nicotiana tabacum HOM05D007895 ORTHO05D010017 1.1e-31 141.7 370 30.3
Sabra11G0000700 Salix brachista HOM05D007895 ORTHO05D010017 1.1e-31 141.7 377 31.6
Medtr2g022910 Medicago truncatula HOM05D007895 ORTHO05D010017 1.4e-31 141.4 368 32.3
Carub.0007s1948 Capsella rubella HOM05D007895 ORTHO05D010017 4.2e-31 139.8 373 28.7
Lalb_Chr18g0056281 Lupinus albus HOM05D007895 ORTHO05D010017 7.2e-31 139.0 368 32.1
Lsat_1_v5_gn_7_17681 Lactuca sativa HOM05D007895 ORTHO05D010017 1.6e-30 137.9 367 27.8
DCAR_004211 Daucus carota HOM05D007895 ORTHO05D010017 3.6e-30 136.7 371 28.6
AUR62026503 Chenopodium quinoa HOM05D001404 ORTHO05D009009 1.4e-29 134.8 197 40.1
Cc09_g01830 Coffea canephora HOM05D007895 ORTHO05D010017 3.0e-29 133.7 376 29.5
SEGI_39493 Sequoiadendron giganteum HOM05D001404 ORTHO05D009009 1.1e-28 131.7 127 52.0
THA.LOC104806298 Tarenaya hassleriana HOM05D007895 ORTHO05D010017 1.1e-26 125.2 373 27.6
A01p13190 Brassica napus HOM05D007895 ORTHO05D010017 7.0e-26 122.5 369 25.2
SEGI_25303 Sequoiadendron giganteum HOM05D001404 ORTHO05D009009 4.5e-25 119.8 133 47.4
SEGI_33690 Sequoiadendron giganteum HOM05D001404 ORTHO05D009009 1.3e-24 118.2 127 48.8
MD13G1085400 Malus domestica HOM05D001404 ORTHO05D009009 6.5e-24 115.9 86 62.8
MCO10G058 Micromonas commoda HOM05D001404 ORTHO05D009009 4.7e-22 109.8 440 25.7
CDE02G0632 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 1.4e-21 108.2 370 27.8
Mapoly0021s0002 Marchantia polymorpha HOM05D007895 ORTHO05D010017 1.5e-20 104.8 249 30.5
HanXRQChr17g0570121 Helianthus annuus HOM05D001404 ORTHO05D009009 9.7e-20 102.1 82 54.9
CDE05G3159 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 2.2e-19 100.9 295 30.8
ATR0712G115 Amborella trichopoda HOM05D001404 ORTHO05D009009 1.2e-17 95.1 68 58.8
Lalb_Chr15g0087511 Lupinus albus HOM05D007895 ORTHO05D010017 1.3e-16 91.7 195 34.4
TPR.G17205 Trifolium pratense HOM05D001404 ORTHO05D009009 1.7e-16 91.3 68 57.4
Lsat_1_v5_gn_1_78741 Lactuca sativa HOM05D000538 ORTHO05D009009 3.6e-14 83.6 63 63.5
Oeu048569.1 Olea europaea HOM05D000240 ORTHO05D002608 1.7e-11 74.7 47 80.9
Lsat_1_v5_gn_1_40080 Lactuca sativa HOM05D000207 ORTHO05D000191 4.8e-11 73.2 58 56.9
Duzib251G0488 Durio zibethinus HOM05D001404 ORTHO05D009009 6.3e-11 72.8 64 53.1
Lalb_Chr15g0087501 Lupinus albus HOM05D007895 ORTHO05D010017 9.1e-10 68.9 117 36.8
Duzib160G0114 Durio zibethinus HOM05D007895 ORTHO05D010017 1.0e-08 65.5 190 26.3
Medtr5g036455 Medicago truncatula HOM05D001404 ORTHO05D009009 1.0e-08 65.5 72 45.8
C06p36300 Brassica napus HOM05D001404 ORTHO05D009009 1.2e-06 58.5 50 58.0
Cre02.g093401 Chlamydomonas reinhardtii HOM05D001404 ORTHO05D140787 8.0e-06 55.8 61 44.3
MELO3C012030.2 Cucumis melo HOM05D001404 ORTHO05D009009 8.0e-06 55.8 35 65.7


User provided reference genes

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