Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028539.1 Olea europaea HOM05D004054 ORTHO05D004945 0.0e+00 1731.8 887 100.0
Oeu011693.1 Olea europaea HOM05D004054 ORTHO05D004945 1.9e-279 966.1 789 65.3
MSTRG.671 Avicennia marina HOM05D004054 ORTHO05D004945 3.3e-276 955.3 899 59.7
Migut.L01344 Erythranthe guttata HOM05D004054 ORTHO05D004945 9.7e-276 953.7 900 60.6
Peaxi162Scf00209g00326 Petunia axillaris HOM05D004054 ORTHO05D004945 7.9e-270 934.1 931 57.4
TAR362G0462 Trochodendron aralioides HOM05D004054 ORTHO05D004945 1.5e-268 929.9 909 57.6
Actinidia05393 Actinidia chinensis HOM05D004054 ORTHO05D004945 1.3e-267 926.8 904 57.3
Rhsim01G0215700 Rhododendron simsii HOM05D004054 ORTHO05D004945 6.9e-266 921.0 871 58.3
SGA_v2.0_scaffold302G47866 Striga asiatica HOM05D004054 ORTHO05D004945 6.9e-266 921.0 900 57.6
SalBow2G0733 Salvia bowleyana HOM05D004054 ORTHO05D004945 3.4e-265 918.7 982 55.9
Sopen05g002990 Solanum pennellii HOM05D004054 ORTHO05D004945 5.0e-264 914.8 903 58.0
SalBow2G2854 Salvia bowleyana HOM05D004054 ORTHO05D004945 7.4e-260 901.0 1044 53.4
Nitab4.5_0009649g0020 Nicotiana tabacum HOM05D004054 ORTHO05D004945 2.8e-259 899.0 881 58.0
Cc11_g13490 Coffea canephora HOM05D004054 ORTHO05D004945 1.0e-253 880.6 906 54.2
Nitab4.5_0008717g0030 Nicotiana tabacum HOM05D004054 ORTHO05D004945 6.3e-251 871.3 882 57.4
QL03p065666 Quercus lobata HOM05D004054 ORTHO05D004945 1.4e-250 870.2 905 54.6
Cfa009037 Carpinus fangiana HOM05D004054 ORTHO05D004945 2.6e-249 865.9 906 55.1
GSVIVG01036940001 Vitis vinifera HOM05D004054 ORTHO05D004945 1.9e-247 859.8 903 54.2
Thecc.02G355300 Theobroma cacao HOM05D004054 ORTHO05D004945 2.5e-247 859.4 895 55.1
CSS0048330 Camellia sinensis var. sinensis HOM05D004054 ORTHO05D004945 5.7e-244 848.2 880 55.3
Duzib268G1532 Durio zibethinus HOM05D004054 ORTHO05D004945 8.3e-243 844.3 898 54.3
Ciclev10030693m.g Citrus clementina HOM05D004054 ORTHO05D004945 1.1e-242 844.0 909 52.9
Hma1.2p1_1545F.1_g289900 Hydrangea macrophylla HOM05D004054 ORTHO05D004945 1.8e-242 843.2 771 59.8
Gohir.A13G052300 Gossypium hirsutum HOM05D004054 ORTHO05D004945 7.7e-241 837.8 897 54.2
Gorai.013G077900 Gossypium raimondii HOM05D004054 ORTHO05D004945 1.7e-240 836.6 895 54.2
vmacro07429 Vaccinium macrocarpon HOM05D004054 ORTHO05D004945 3.8e-240 835.5 864 55.1
GSVIVG01020074001 Vitis vinifera HOM05D004054 ORTHO05D004945 6.5e-240 834.7 910 53.1
Aqoxy5G00175 Aquilegia oxysepala HOM05D004054 ORTHO05D004945 8.5e-240 834.3 912 53.7
MD13G1079000 Malus domestica HOM05D004054 ORTHO05D004945 4.2e-239 832.0 875 55.2
Lsat_1_v5_gn_8_54080 Lactuca sativa HOM05D004054 ORTHO05D004945 1.2e-238 830.5 904 53.2
MBI11_g00106_MAGBIO Magnolia biondii HOM05D004054 ORTHO05D004945 1.2e-238 830.5 915 51.8
Gohir.D13G068400 Gossypium hirsutum HOM05D004054 ORTHO05D004945 4.7e-238 828.6 895 54.2
ClCG05G024580 Citrullus lanatus HOM05D004054 ORTHO05D004945 1.8e-237 826.6 917 51.7
CsaV3_5G032370 Cucumis sativus L. HOM05D004054 ORTHO05D004945 5.2e-237 825.1 898 51.7
DCAR_027382 Daucus carota HOM05D004054 ORTHO05D004945 4.4e-236 822.0 901 53.6
PSO832G3945 Papaver somniferum HOM05D004054 ORTHO05D004945 9.8e-236 820.8 911 52.9
COL.COLO4_07923 Corchorus olitorius HOM05D004054 ORTHO05D004945 3.7e-235 818.9 900 53.9
MBI17_g39912_MAGBIO Magnolia biondii HOM05D004054 ORTHO05D004945 2.4e-234 816.2 897 50.9
Haze_12066 Corylus avellana HOM05D004054 ORTHO05D004945 3.1e-234 815.8 1009 50.0
Dinv24955 Davidia involucrata HOM05D004054 ORTHO05D004945 3.1e-234 815.8 734 61.3
RcHm_v2.0_Chr1g0331881 Rosa chinensis HOM05D004054 ORTHO05D004945 4.1e-234 815.5 875 53.9
Prupe.1G267800 Prunus persica HOM05D004054 ORTHO05D004945 9.1e-234 814.3 908 54.0
RcHm_v2.0_Chr1g0353921 Rosa chinensis HOM05D004054 ORTHO05D004945 3.8e-232 808.9 873 54.1
RcHm_v2.0_Chr4g0440641 Rosa chinensis HOM05D004054 ORTHO05D004945 5.0e-232 808.5 874 53.7
TWI36G0714 Tripterygium wilfordii HOM05D004054 ORTHO05D004945 6.6e-232 808.1 902 52.3
FAN12G3951 Fragaria x ananassa HOM05D004054 ORTHO05D004945 1.5e-231 807.0 868 53.5
FvH4_4g31960 Fragaria vesca HOM05D004054 ORTHO05D004945 2.5e-231 806.2 869 53.6
MD16G1078700 Malus domestica HOM05D004054 ORTHO05D004945 3.3e-231 805.8 799 57.4
Sed0026408 Sechium edule HOM05D004054 ORTHO05D004945 9.5e-231 804.3 858 52.0
FAN17G1509 Fragaria x ananassa HOM05D004054 ORTHO05D004945 2.8e-230 802.7 869 53.5
ECA247G4086 Erigeron canadensis HOM05D004054 ORTHO05D004945 1.2e-228 797.3 898 51.6
FAN22G1878 Fragaria x ananassa HOM05D004054 ORTHO05D004945 2.0e-228 796.6 878 52.8
Potri.010G033900 Populus trichocarpa HOM05D004054 ORTHO05D004945 7.5e-228 794.7 894 52.6
PSO764G0096 Papaver somniferum HOM05D004054 ORTHO05D004945 9.8e-228 794.3 915 52.0
Eucgr.B03410 Eucalyptus grandis HOM05D004054 ORTHO05D004945 1.6e-225 786.9 910 50.5
Atru.chr11.1851 Acer truncatum HOM05D004054 ORTHO05D004945 2.7e-225 786.2 901 51.8
Duzib248G1634 Durio zibethinus HOM05D004054 ORTHO05D004945 2.9e-224 782.7 894 52.6
PGR102G2139 Punica granatum HOM05D004054 ORTHO05D004945 3.3e-223 779.2 903 49.9
FAN07G1439 Fragaria x ananassa HOM05D004054 ORTHO05D004945 4.3e-223 778.9 881 52.2
MELO3C012068.2 Cucumis melo HOM05D004054 ORTHO05D004945 8.0e-222 774.6 877 50.7
Gorai.008G182900 Gossypium raimondii HOM05D004054 ORTHO05D004945 2.6e-220 769.6 898 51.2
Sabra10G0030700 Salix brachista HOM05D004054 ORTHO05D004945 9.8e-220 767.7 932 49.5
Glyma.08G296300 Glycine max HOM05D004054 ORTHO05D004945 1.7e-219 766.9 872 53.4
Phvul.003G069800 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 2.9e-219 766.1 872 52.4
arahy.Tifrunner.gnm1.ann1.K6PP8H Arachis hypogaea HOM05D004054 ORTHO05D004945 5.4e-218 761.9 907 51.5
VMungo0251G1664 Vigna mungo HOM05D004054 ORTHO05D004945 5.4e-218 761.9 869 51.9
Lj4g0012636 Lotus japonicus HOM05D004054 ORTHO05D004945 4.6e-217 758.8 870 52.3
Ca_22853_v3 Cicer arietinum L. HOM05D004054 ORTHO05D004945 6.0e-217 758.4 878 50.2
HanXRQChr12g0369801 Helianthus annuus HOM05D004054 ORTHO05D004945 7.8e-217 758.1 901 50.8
Sc11g0001680 Simmondsia chinensis HOM05D004054 ORTHO05D004945 1.0e-216 757.7 903 49.6
Glyma.18G126000 Glycine max HOM05D004054 ORTHO05D004945 2.3e-216 756.5 874 51.7
Gohir.D12G170300 Gossypium hirsutum HOM05D004054 ORTHO05D004945 5.0e-216 755.4 867 51.3
Solyc05g007030.4 Solanum lycopersicum HOM05D004054 ORTHO05D004945 1.2e-214 750.7 604 65.7
Carub.0003s1763 Capsella rubella HOM05D004054 ORTHO05D004945 3.6e-214 749.2 906 50.4
Lalb_Chr16g0392581 Lupinus albus HOM05D004054 ORTHO05D004945 6.2e-214 748.4 877 51.1
Hund25271 Selenicereus undatus HOM05D004054 ORTHO05D004945 4.0e-213 745.7 891 49.9
Medtr8g469270 Medicago truncatula HOM05D004054 ORTHO05D004945 2.6e-212 743.0 876 50.1
Manes.05G096500 Manihot esculenta HOM05D004054 ORTHO05D004945 4.9e-211 738.8 759 55.5
TPR.G33257 Trifolium pratense HOM05D004054 ORTHO05D004945 2.4e-210 736.5 908 49.0
Thhalv10020058m.g Eutrema salsugineum HOM05D004054 ORTHO05D004945 7.1e-210 734.9 908 49.6
THA.LOC104820344 Tarenaya hassleriana HOM05D004054 ORTHO05D004945 7.1e-210 734.9 902 50.2
Sp3g16020 Schrenkiella parvula HOM05D004054 ORTHO05D004945 1.0e-208 731.1 913 48.7
AT3G17900 Arabidopsis thaliana HOM05D004054 ORTHO05D004945 1.7e-208 730.3 907 49.6
CARHR093230 Cardamine hirsuta HOM05D004054 ORTHO05D004945 8.6e-208 728.0 904 49.1
AL3G31070 Arabidopsis lyrata HOM05D004054 ORTHO05D004945 1.5e-207 727.2 906 49.0
AUR62026447 Chenopodium quinoa HOM05D004054 ORTHO05D004945 8.1e-206 721.5 919 49.0
Psat4g132120 Pisum sativum HOM05D004054 ORTHO05D004945 1.5e-204 717.2 913 48.3
Aa31LG8G4770 Aethionema arabicum HOM05D004054 ORTHO05D004945 4.4e-204 715.7 952 46.8
BcaB04g20809 Brassica carinata HOM05D004054 ORTHO05D004945 6.4e-203 711.8 894 47.9
Nn3g19739 Nelumbo nucifera HOM05D004054 ORTHO05D004945 1.5e-199 700.7 748 53.2
Glyma.02G021900 Glycine max HOM05D004054 ORTHO05D004945 1.1e-197 694.5 819 50.5
BraA03t13202Z Brassica rapa HOM05D004054 ORTHO05D004945 1.4e-197 694.1 907 48.0
A01p36490 Brassica napus HOM05D004054 ORTHO05D004945 5.2e-197 692.2 900 47.2
AUR62026254 Chenopodium quinoa HOM05D004054 ORTHO05D004945 5.8e-196 688.7 892 48.4
C03p49280 Brassica napus HOM05D004054 ORTHO05D004945 7.6e-196 688.3 899 47.3
C01p46250 Brassica napus HOM05D004054 ORTHO05D004945 2.9e-195 686.4 863 47.5
ATR0564G248 Amborella trichopoda HOM05D004054 ORTHO05D004945 4.9e-195 685.6 878 46.7
BcaC09g48754 Brassica carinata HOM05D004054 ORTHO05D004945 4.9e-195 685.6 863 47.9
BolC1t04586H Brassica oleracea HOM05D004054 ORTHO05D004945 3.2e-194 682.9 863 47.4
BraA01t03713Z Brassica rapa HOM05D004054 ORTHO05D004945 9.3e-194 681.4 901 47.1
Psat2g124400 Pisum sativum HOM05D004054 ORTHO05D004945 1.2e-193 681.0 895 46.8
BolC3t17216H Brassica oleracea HOM05D004054 ORTHO05D004945 1.3e-192 677.6 898 46.9
Lalb_Chr09g0335271 Lupinus albus HOM05D004054 ORTHO05D004945 9.6e-191 671.4 845 48.9
HPP92_011033 Vanilla planifolia HOM05D004054 ORTHO05D004945 1.1e-189 667.9 902 46.6
BcaB04g18970 Brassica carinata HOM05D004054 ORTHO05D004945 3.4e-188 662.9 901 46.6
Ca_04741_v3 Cicer arietinum L. HOM05D004054 ORTHO05D004945 1.3e-187 661.0 876 46.7
CDE09G0195 Ceratophyllum demersum HOM05D004054 ORTHO05D004945 2.9e-187 659.8 836 47.4
Medtr5g038440 Medicago truncatula HOM05D004054 ORTHO05D004945 4.3e-183 646.0 898 46.0
A03p40440 Brassica napus HOM05D004054 ORTHO05D004945 8.1e-182 641.7 761 50.7
Hund05913 Selenicereus undatus HOM05D004054 ORTHO05D004945 8.1e-182 641.7 826 47.5
Lj2g0020807 Lotus japonicus HOM05D004054 ORTHO05D004945 9.0e-181 638.3 764 49.9
TPR.G13762 Trifolium pratense HOM05D004054 ORTHO05D004945 3.5e-177 626.3 827 47.0
BcaC01g03722 Brassica carinata HOM05D004054 ORTHO05D004945 6.0e-177 625.5 902 44.7
EL10Ac6g13147 Beta vulgaris HOM05D004054 ORTHO05D004945 1.3e-176 624.4 856 45.7
Lalb_Chr17g0340361 Lupinus albus HOM05D004054 ORTHO05D004945 6.2e-174 615.5 846 45.3
arahy.Tifrunner.gnm1.ann1.S53SYG Arachis hypogaea HOM05D004054 ORTHO05D004945 8.1e-174 615.1 813 44.9
Cpa.g.sc5.276 Carica papaya HOM05D004054 ORTHO05D004945 8.1e-174 615.1 554 60.1
Zm00001eb409770 Zea mays HOM05D004054 ORTHO05D004945 1.7e-171 607.4 906 44.2
unitig_22.g6528 Utricularia gibba HOM05D004054 ORTHO05D004945 5.1e-168 595.9 908 43.5
arahy.Tifrunner.gnm1.ann1.B2D650 Arachis hypogaea HOM05D004054 ORTHO05D004945 2.7e-161 573.5 813 43.1
SEGI_39580 Sequoiadendron giganteum HOM05D004054 ORTHO05D004945 1.1e-159 568.2 948 40.4
Lsat_1_v5_gn_4_9281 Lactuca sativa HOM05D004054 ORTHO05D004945 6.9e-157 558.9 858 43.7
Gohir.A12G166800 Gossypium hirsutum HOM05D004054 ORTHO05D004945 1.4e-152 544.7 552 55.4
Nn1g02896 Nelumbo nucifera HOM05D004054 ORTHO05D004945 3.7e-150 536.6 906 39.5
VMungo1215G1372 Vigna mungo HOM05D004054 ORTHO05D004945 2.3e-144 517.3 1132 35.0
CDE02G2379 Ceratophyllum demersum HOM05D004054 ORTHO05D004945 3.1e-141 506.9 764 42.3
ECA234G1496 Erigeron canadensis HOM05D004054 ORTHO05D004945 3.1e-141 506.9 871 41.2
CiPaw.06G080700 Carya illinoinensis HOM05D004054 ORTHO05D004945 7.7e-140 502.3 448 60.0
HanXRQChr03g0092771 Helianthus annuus HOM05D004054 ORTHO05D004945 3.8e-139 500.0 765 40.9
Ah.03g132020 Amaranthus hybridus HOM05D004054 ORTHO05D004945 3.5e-124 450.3 599 46.4
unitig_8.g3947 Utricularia gibba HOM05D004054 ORTHO05D004945 3.5e-124 450.3 549 48.8
Mapoly0224s0002 Marchantia polymorpha HOM05D004054 ORTHO05D004945 1.0e-123 448.7 937 34.6
Zm00001eb066230 Zea mays HOM05D004054 ORTHO05D004945 8.8e-120 435.6 594 47.3
Phvul.002G066700 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 9.8e-119 432.2 535 48.2
Pp3c16_680 Physcomitrium patens HOM05D004054 ORTHO05D004945 4.0e-104 383.6 802 34.0
SMO119G0368 Selaginella moellendorffii HOM05D004054 ORTHO05D004945 7.8e-92 342.8 646 35.3
AagrBONN_evm.TU.Sc2ySwM_228.4114 Anthoceros agrestis HOM05D004054 ORTHO05D004945 1.8e-80 305.1 744 33.7
Psat0s2845g0120 Pisum sativum HOM05D004054 ORTHO05D004945 3.5e-76 290.8 436 43.3
CiPaw.06G080600 Carya illinoinensis HOM05D004054 ORTHO05D004945 1.4e-72 278.9 395 45.6
Potri.008G194566 Populus trichocarpa HOM05D004054 ORTHO05D004945 3.8e-62 244.2 266 52.6
Phvul.002G066500 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 1.1e-58 232.6 282 49.3
Cpa.g.sc5.277 Carica papaya HOM05D004054 ORTHO05D004945 1.1e-56 226.1 346 42.5
Potri.008G194632 Populus trichocarpa HOM05D004054 ORTHO05D004945 2.6e-47 194.9 195 59.0
MSTRG.2359 Avicennia marina HOM05D004054 ORTHO05D004945 8.7e-43 179.9 169 60.9
Gohir.A12G166900 Gossypium hirsutum HOM05D004054 ORTHO05D004945 1.1e-40 172.9 276 42.8
RcHm_v2.0_Chr1g0331861 Rosa chinensis HOM05D004054 ORTHO05D004945 1.1e-29 136.3 138 55.1
C02p33030 Brassica napus HOM05D004054 ORTHO05D004945 1.4e-29 136.0 190 46.3
C03p36410 Brassica napus HOM05D004054 ORTHO05D004945 1.4e-24 119.4 211 39.8
BolC3t15954H Brassica oleracea HOM05D004054 ORTHO05D004945 1.4e-24 119.4 211 39.8
A05p04500 Brassica napus HOM05D004054 ORTHO05D004945 1.2e-20 106.3 215 38.1
C03p62480 Brassica napus HOM05D004054 ORTHO05D004945 1.2e-20 106.3 215 38.1
CBR_g39858 Chara braunii HOM05D004054 ORTHO05D009492 6.7e-19 100.5 375 25.9
unitig_8.g3946 Utricularia gibba HOM05D004054 ORTHO05D004945 2.6e-18 98.6 186 37.6
CAN.G793.43 Capsicum annuum HOM05D004054 ORTHO05D004945 3.7e-17 94.7 191 38.7
A01p41860 Brassica napus HOM05D004054 ORTHO05D004945 1.1e-16 93.2 105 49.5
PGSC0003DMG402017622 Solanum tuberosum HOM05D004054 ORTHO05D004945 7.0e-16 90.5 101 50.5
Lalb_Chr17g0340371 Lupinus albus HOM05D004054 ORTHO05D004945 2.0e-15 89.0 60 75.0
Oeu011694.1 Olea europaea HOM05D004054 ORTHO05D049449 1.0e-14 86.7 113 47.8
C06p17170 Brassica napus HOM05D004054 ORTHO05D004945 4.2e-13 81.3 172 36.0
BcaC08g44394 Brassica carinata HOM05D004054 ORTHO05D004945 1.2e-10 73.2 157 32.5
C08p43480 Brassica napus HOM05D004054 ORTHO05D004945 2.0e-10 72.4 162 35.8
BolC3t18505H Brassica oleracea HOM05D004054 ORTHO05D004945 2.6e-10 72.0 233 31.3
Lsat_1_v5_gn_3_52120 Lactuca sativa HOM05D004054 ORTHO05D004945 2.6e-10 72.0 75 50.7
Lsat_1_v5_gn_7_73540 Lactuca sativa HOM05D004054 ORTHO05D004945 1.7e-09 69.3 68 54.4
CBR_g39856 Chara braunii HOM05D000019 ORTHO05D000353 5.4e-08 64.3 219 23.7
A06p30220 Brassica napus HOM05D003604 ORTHO05D004110 9.1e-08 63.5 78 46.2
CBR_g39853 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-07 62.4 47 57.4
MBI09_g47007_MAGBIO Magnolia biondii HOM05D003023 ORTHO05D018021 2.0e-07 62.4 96 40.6
C06p10280 Brassica napus HOM05D011797 ORTHO05D012335 4.5e-07 61.2 37 78.4


User provided reference genes

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