Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 1.9e-50 202.2 101 100.0
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 4.5e-28 127.9 102 66.7
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 1.3e-27 126.3 99 71.7
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 1.7e-27 125.9 104 66.3
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 8.5e-27 123.6 99 70.7
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 1.9e-26 122.5 99 67.7
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 2.1e-25 119.0 99 67.7
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 2.1e-25 119.0 99 67.7
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 3.6e-25 118.2 102 65.7
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 6.1e-25 117.5 74 79.7
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 2.3e-24 115.5 99 66.7
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 3.9e-24 114.8 99 67.7
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 5.1e-24 114.4 99 66.7
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 5.1e-24 114.4 100 67.0
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 8.8e-24 113.6 117 57.3
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 9.7e-23 110.2 99 68.7
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 4.8e-22 107.8 99 64.6
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 5.3e-21 104.4 100 61.0
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 2.6e-20 102.1 99 62.6
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 7.7e-20 100.5 100 63.0
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 6.5e-19 97.4 99 56.6
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 1.4e-18 96.3 103 54.4
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 3.2e-18 95.1 103 58.3
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 4.2e-18 94.7 98 52.0
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 5.5e-18 94.4 100 53.0
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 7.2e-18 94.0 100 55.0
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 9.4e-18 93.6 107 49.5
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 1.2e-17 93.2 98 53.1
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 1.2e-17 93.2 100 55.0
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 1.2e-17 93.2 98 55.1
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 1.6e-17 92.8 99 56.6
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 1.6e-17 92.8 99 54.5
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 1.6e-17 92.8 90 60.0
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 3.6e-17 91.7 103 53.4
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 3.6e-17 91.7 103 53.4
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 3.6e-17 91.7 106 50.9
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 4.7e-17 91.3 98 56.1
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 6.1e-17 90.9 107 51.4
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 1.4e-16 89.7 103 51.5
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 1.4e-16 89.7 100 53.0
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 1.8e-16 89.4 98 52.0
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 1.8e-16 89.4 100 53.0
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 3.9e-16 88.2 103 51.5
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 3.9e-16 88.2 100 53.0
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 3.9e-16 88.2 101 50.5
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 5.1e-16 87.8 98 51.0
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 6.7e-16 87.4 98 53.1
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 6.7e-16 87.4 99 53.5
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 8.8e-16 87.0 103 52.4
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 8.8e-16 87.0 99 52.5
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 8.8e-16 87.0 104 52.9
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 1.1e-15 86.7 103 51.5
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.5e-15 86.3 99 51.5
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 1.5e-15 86.3 93 55.9
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 2.6e-15 85.5 101 51.5
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 3.3e-15 85.1 98 52.0
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 3.3e-15 85.1 98 53.1
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 4.4e-15 84.7 104 49.0
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 4.4e-15 84.7 99 54.5
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 7.4e-15 84.0 102 51.0
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 7.4e-15 84.0 94 53.2
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 9.7e-15 83.6 106 48.1
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 9.7e-15 83.6 101 48.5
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 1.3e-14 83.2 98 50.0
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 1.3e-14 83.2 66 69.7
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 1.7e-14 82.8 104 51.9
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 1.7e-14 82.8 104 51.9
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 2.2e-14 82.4 102 51.0
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 2.2e-14 82.4 105 46.7
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 3.7e-14 81.6 104 51.0
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 3.7e-14 81.6 104 51.0
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 4.8e-14 81.3 104 46.2
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 4.8e-14 81.3 104 48.1
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 6.3e-14 80.9 102 48.0
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 8.2e-14 80.5 98 49.0
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 1.1e-13 80.1 102 49.0
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 1.4e-13 79.7 98 53.1
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 1.4e-13 79.7 97 49.5
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 1.8e-13 79.3 98 52.0
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 1.8e-13 79.3 99 51.5
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 2.4e-13 79.0 99 50.5
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 5.3e-13 77.8 99 44.4
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 9.1e-13 77.0 101 47.5
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 2.0e-12 75.9 94 48.9
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 2.6e-12 75.5 98 44.9
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 3.5e-12 75.1 98 45.9
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 1.3e-11 73.2 110 42.7
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 1.7e-11 72.8 111 41.4
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 2.9e-11 72.0 99 44.4
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 2.9e-11 72.0 101 46.5
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 4.2e-10 68.2 42 78.6
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 4.2e-10 68.2 75 58.7
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 7.2e-10 67.4 93 46.2
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 9.4e-10 67.0 42 71.4
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 2.7e-09 65.5 42 71.4
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 4.7e-09 64.7 118 39.8
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 1.8e-08 62.8 109 40.4
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 2.3e-08 62.4 98 40.8
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 1.5e-07 59.7 93 45.2


User provided reference genes

Program Settings