Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028468.1 Olea europaea HOM05D004711 ORTHO05D005594 2.4e-93 345.5 179 100.0
Oeu063842.1 Olea europaea HOM05D004711 ORTHO05D005594 3.0e-35 152.5 184 53.8
Migut.J00018 Erythranthe guttata HOM05D004711 ORTHO05D005594 9.4e-29 131.0 181 47.5
SGA_v2.0_scaffold85G26592 Striga asiatica HOM05D004711 ORTHO05D005594 2.2e-25 119.8 167 49.7
Actinidia32572 Actinidia chinensis HOM05D004711 ORTHO05D005594 2.8e-25 119.4 177 44.1
Rhsim05G0232600 Rhododendron simsii HOM05D004711 ORTHO05D005594 3.7e-25 119.0 140 53.6
Dinv16951 Davidia involucrata HOM05D004711 ORTHO05D005594 1.4e-24 117.1 189 43.9
Oeu030100.1 Olea europaea HOM05D004711 ORTHO05D005594 3.1e-24 115.9 182 44.5
CSS0041259 Camellia sinensis var. sinensis HOM05D004711 ORTHO05D005594 1.2e-23 114.0 189 41.3
CSS0008345 Camellia sinensis var. sinensis HOM05D004711 ORTHO05D005594 5.9e-23 111.7 178 42.7
Actinidia11492 Actinidia chinensis HOM05D004711 ORTHO05D005594 1.0e-22 110.9 184 42.9
Cc06_g00250 Coffea canephora HOM05D004711 ORTHO05D005594 3.8e-22 109.0 186 40.9
Lj2C57T4 Lonicera japonica HOM05D004711 ORTHO05D005594 3.8e-22 109.0 177 44.6
CSS0021593 Camellia sinensis var. sinensis HOM05D004711 ORTHO05D005594 1.5e-21 107.1 178 41.6
Oeu026938.1 Olea europaea HOM05D004711 ORTHO05D005594 1.5e-21 107.1 181 41.4
PGSC0003DMG400002318 Solanum tuberosum HOM05D004711 ORTHO05D005594 1.5e-21 107.1 175 41.7
Actinidia29018 Actinidia chinensis HOM05D004711 ORTHO05D005594 9.4e-21 104.4 187 41.2
Hma1.2p1_0537F.1_g174195 Hydrangea macrophylla HOM05D004711 ORTHO05D005594 1.2e-20 104.0 178 43.8
Peaxi162Scf00732g00135 Petunia axillaris HOM05D004711 ORTHO05D005594 1.6e-20 103.6 175 40.6
MSTRG.5483 Avicennia marina HOM05D004711 ORTHO05D005594 6.1e-20 101.7 178 41.6
CAN.G180.2 Capsicum annuum HOM05D004711 ORTHO05D005594 8.0e-20 101.3 175 40.6
Sopen09g013790 Solanum pennellii HOM05D004711 ORTHO05D005594 1.0e-19 100.9 175 41.7
Solyc09g031517.1 Solanum lycopersicum HOM05D004711 ORTHO05D005594 1.8e-19 100.1 175 41.1
Lj3A939T103 Lonicera japonica HOM05D004711 ORTHO05D005594 2.3e-19 99.8 172 43.0
VMungo1383G3052 Vigna mungo HOM05D004711 ORTHO05D005594 8.8e-19 97.8 194 41.8
Nn2g10244 Nelumbo nucifera HOM05D004711 ORTHO05D005594 4.4e-18 95.5 179 42.5
DCAR_015327 Daucus carota HOM05D004711 ORTHO05D005594 2.2e-17 93.2 186 36.6
TAR633G0481 Trochodendron aralioides HOM05D004711 ORTHO05D005594 2.2e-17 93.2 179 40.8
Phvul.008G080400 Phaseolus vulgaris HOM05D004711 ORTHO05D005594 2.8e-17 92.8 195 39.0
Potri.006G110700 Populus trichocarpa HOM05D004711 ORTHO05D005594 8.3e-17 91.3 188 35.6
Glyma.18G216300 Glycine max HOM05D004711 ORTHO05D005594 1.1e-16 90.9 179 39.1
Haze_21199 Corylus avellana HOM05D004711 ORTHO05D005594 2.4e-16 89.7 182 39.6
MD04G1176700 Malus domestica HOM05D004711 ORTHO05D005594 3.1e-16 89.4 183 38.3
Cpa.g.sc72.61 Carica papaya HOM05D004711 ORTHO05D005594 5.4e-16 88.6 189 38.6
COL.COLO4_21250 Corchorus olitorius HOM05D004711 ORTHO05D005594 5.4e-16 88.6 180 38.9
Glyma.09G272800 Glycine max HOM05D004711 ORTHO05D005594 1.2e-15 87.4 199 36.7
Duzib268G1837 Durio zibethinus HOM05D004711 ORTHO05D005594 2.0e-15 86.7 191 37.2
Lj1g0020419 Lotus japonicus HOM05D004711 ORTHO05D005594 2.0e-15 86.7 180 38.3
Sabra06G0086000 Salix brachista HOM05D004711 ORTHO05D005594 2.7e-15 86.3 189 34.9
TAR636G2556 Trochodendron aralioides HOM05D004711 ORTHO05D005594 2.7e-15 86.3 177 37.9
Thecc.04G149100 Theobroma cacao HOM05D004711 ORTHO05D005594 4.5e-15 85.5 193 36.3
FAN14G5267 Fragaria x ananassa HOM05D004711 ORTHO05D005594 1.0e-14 84.3 181 38.7
Nn1g01604 Nelumbo nucifera HOM05D004711 ORTHO05D005594 1.0e-14 84.3 178 38.8
FAN02G0291 Fragaria x ananassa HOM05D004711 ORTHO05D005594 1.3e-14 84.0 181 38.7
RcHm_v2.0_Chr3g0460111 Rosa chinensis HOM05D004711 ORTHO05D005594 1.3e-14 84.0 181 37.0
FvH4_6g09520 Fragaria vesca HOM05D004711 ORTHO05D005594 2.2e-14 83.2 181 38.1
FAN05G2346 Fragaria x ananassa HOM05D004711 ORTHO05D005594 2.2e-14 83.2 181 38.1
Medtr7g073720 Medicago truncatula HOM05D004711 ORTHO05D005594 2.2e-14 83.2 194 37.6
Ca_07784_v3 Cicer arietinum L. HOM05D004711 ORTHO05D005594 2.9e-14 82.8 194 34.5
Gohir.A03G087100 Gossypium hirsutum HOM05D004711 ORTHO05D005594 2.9e-14 82.8 193 37.8
Gohir.D02G002600 Gossypium hirsutum HOM05D004711 ORTHO05D005594 2.9e-14 82.8 191 35.1
QL07p031674 Quercus lobata HOM05D004711 ORTHO05D005594 3.8e-14 82.4 191 37.7
vmacro20386 Vaccinium macrocarpon HOM05D004711 ORTHO05D005594 3.8e-14 82.4 102 47.1
MD12G1191700 Malus domestica HOM05D004711 ORTHO05D005594 5.0e-14 82.0 182 36.3
Prupe.6G296400 Prunus persica HOM05D004711 ORTHO05D005594 5.0e-14 82.0 182 39.0
Gorai.005G121000 Gossypium raimondii HOM05D004711 ORTHO05D005594 8.5e-14 81.3 193 37.3
Gorai.005G003100 Gossypium raimondii HOM05D004711 ORTHO05D005594 1.1e-13 80.9 191 34.6
FAN09G1198 Fragaria x ananassa HOM05D004711 ORTHO05D005594 1.5e-13 80.5 192 37.0
Nn5g26805 Nelumbo nucifera HOM05D004711 ORTHO05D005594 1.5e-13 80.5 142 43.7
TPR.G24318 Trifolium pratense HOM05D004711 ORTHO05D005594 1.5e-13 80.5 181 39.2
Potri.016G139500 Populus trichocarpa HOM05D004711 ORTHO05D005594 2.5e-13 79.7 202 36.6
TWI74G1298 Tripterygium wilfordii HOM05D004711 ORTHO05D005594 2.5e-13 79.7 172 37.2
Duzib151G1091 Durio zibethinus HOM05D004711 ORTHO05D005594 3.2e-13 79.3 191 34.0
Gohir.D02G106500 Gossypium hirsutum HOM05D004711 ORTHO05D005594 3.2e-13 79.3 193 36.8
Ciclev10011470m.g Citrus clementina HOM05D004711 ORTHO05D005594 5.5e-13 78.6 181 36.5
Sabra04G0156000 Salix brachista HOM05D004711 ORTHO05D005594 7.2e-13 78.2 201 37.3
PGR004G0084 Punica granatum HOM05D004711 ORTHO05D005594 9.4e-13 77.8 186 36.6
TWI53G0370 Tripterygium wilfordii HOM05D004711 ORTHO05D005594 9.4e-13 77.8 168 39.9
Sc20g0007170 Simmondsia chinensis HOM05D004711 ORTHO05D005594 1.6e-12 77.0 173 36.4
Manes.08G169400 Manihot esculenta HOM05D004711 ORTHO05D005594 2.1e-12 76.6 189 34.4
Hund03689 Selenicereus undatus HOM05D004711 ORTHO05D005594 3.6e-12 75.9 181 34.3
unitig_22.g6618 Utricularia gibba HOM05D004711 ORTHO05D005594 3.6e-12 75.9 152 37.5
Eucgr.K01295 Eucalyptus grandis HOM05D004711 ORTHO05D005594 4.7e-12 75.5 188 35.6
Gohir.A02G002300 Gossypium hirsutum HOM05D004711 ORTHO05D005594 6.1e-12 75.1 191 33.5
GSVIVG01029882001 Vitis vinifera HOM05D004711 ORTHO05D005594 6.1e-12 75.1 196 34.2
Ah.15g089840 Amaranthus hybridus HOM05D004711 ORTHO05D005594 1.0e-11 74.3 183 34.4
Atru.chr8.78 Acer truncatum HOM05D004711 ORTHO05D005594 1.4e-11 73.9 157 37.6
EL10Ac7g17131 Beta vulgaris HOM05D004711 ORTHO05D005594 1.4e-11 73.9 184 33.2
HanXRQChr10g0287631 Helianthus annuus HOM05D004711 ORTHO05D005594 1.4e-11 73.9 191 35.6
AUR62006439 Chenopodium quinoa HOM05D004711 ORTHO05D005594 6.8e-11 71.6 133 38.3
Aqoxy4G03297 Aquilegia oxysepala HOM05D004711 ORTHO05D005594 1.2e-10 70.9 129 41.1
MELO3C025248.2 Cucumis melo HOM05D004711 ORTHO05D005594 1.5e-10 70.5 194 34.5
ECA247G0260 Erigeron canadensis HOM05D004711 ORTHO05D005594 2.6e-10 69.7 190 36.3
Lsat_1_v5_gn_9_39741 Lactuca sativa HOM05D004711 ORTHO05D005594 2.6e-10 69.7 194 33.5
AUR62029794 Chenopodium quinoa HOM05D004711 ORTHO05D005594 3.4e-10 69.3 186 32.3
Nitab4.5_0001876g0050 Nicotiana tabacum HOM05D004711 ORTHO05D005594 7.5e-10 68.2 118 39.0
arahy.Tifrunner.gnm1.ann1.QFH4DU Arachis hypogaea HOM05D004711 ORTHO05D005594 1.3e-09 67.4 193 35.2
Nitab4.5_0000048g0270 Nicotiana tabacum HOM05D004711 ORTHO05D005594 1.7e-09 67.0 102 43.1
Oeu013178.3 Olea europaea HOM05D004711 ORTHO05D005594 1.7e-09 67.0 94 47.9
Manes.09G122600 Manihot esculenta HOM05D004711 ORTHO05D005594 2.2e-09 66.6 190 35.3
CsaV3_4G027310 Cucumis sativus L. HOM05D004711 ORTHO05D005594 2.8e-09 66.2 193 33.7
arahy.Tifrunner.gnm1.ann1.C9I5IG Arachis hypogaea HOM05D004711 ORTHO05D005594 6.3e-09 65.1 193 34.7
VMungo0331G0284 Vigna mungo HOM05D004711 ORTHO05D005594 1.1e-08 64.3 179 33.5
PSO017G6473 Papaver somniferum HOM05D004711 ORTHO05D005594 1.4e-08 63.9 191 32.5
PSO170G0854 Papaver somniferum HOM05D004711 ORTHO05D005594 1.8e-08 63.5 191 31.9
Sed0027783 Sechium edule HOM05D004711 ORTHO05D005594 3.1e-08 62.8 182 34.1
ClCG04G006250 Citrullus lanatus HOM05D004711 ORTHO05D005594 5.4e-08 62.0 192 33.9
HanXRQChr01g0000511 Helianthus annuus HOM05D004711 ORTHO05D005594 4.5e-07 58.9 169 34.3
ATR1127G195 Amborella trichopoda HOM05D004711 ORTHO05D005594 1.0e-06 57.8 129 39.5
ECA248G3895 Erigeron canadensis HOM05D001126 ORTHO05D000991 2.3e-06 56.6 181 31.5
Phvul.010G058700 Phaseolus vulgaris HOM05D004711 ORTHO05D005594 2.3e-06 56.6 174 31.6


User provided reference genes

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