Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 6.2e-103 377.5 193 100.0
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 7.4e-88 327.4 196 86.2
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.6e-66 256.5 189 69.8
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.6e-66 256.5 188 70.2
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 4.4e-64 248.4 191 68.1
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 9.7e-64 247.3 192 69.3
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 1.7e-63 246.5 197 65.0
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 2.8e-63 245.7 202 62.4
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.7e-63 245.4 194 69.1
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 4.8e-63 245.0 195 68.2
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 1.1e-62 243.8 190 68.9
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 1.8e-62 243.0 200 64.5
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 5.3e-62 241.5 196 67.3
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 7.0e-62 241.1 195 67.7
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.2e-61 240.4 207 66.7
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 1.5e-61 240.0 187 66.3
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.5e-61 240.0 202 63.4
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 2.6e-61 239.2 205 63.9
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 2.6e-61 239.2 201 65.2
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 3.5e-61 238.8 201 61.7
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.5e-61 238.8 195 68.2
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 5.9e-61 238.0 193 67.9
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 1.7e-60 236.5 195 64.6
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 2.2e-60 236.1 196 64.8
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 3.8e-60 235.3 197 63.5
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 5.0e-60 235.0 192 66.7
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 8.5e-60 234.2 193 64.8
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.1e-59 233.8 193 67.4
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 2.5e-59 232.6 194 61.3
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 7.2e-59 231.1 198 63.1
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 9.4e-59 230.7 198 63.1
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 1.6e-58 229.9 190 64.2
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 1.6e-58 229.9 190 64.2
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 2.1e-58 229.6 199 62.8
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 2.1e-58 229.6 195 63.6
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 3.6e-58 228.8 200 60.0
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 3.6e-58 228.8 196 65.8
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 6.1e-58 228.0 186 62.4
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 8.0e-58 227.6 199 62.8
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 8.0e-58 227.6 199 62.8
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 8.0e-58 227.6 186 64.0
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.0e-57 227.3 197 62.9
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 1.0e-57 227.3 199 64.8
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 1.4e-57 226.9 203 60.1
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.4e-57 226.9 194 62.4
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 1.8e-57 226.5 199 64.8
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 2.3e-57 226.1 198 61.1
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 6.7e-57 224.6 206 61.2
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 8.8e-57 224.2 198 59.1
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 1.1e-56 223.8 195 61.0
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 2.0e-56 223.0 205 61.5
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 3.7e-55 218.8 199 58.8
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 8.2e-55 217.6 196 60.7
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 1.1e-54 217.2 202 58.4
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 1.1e-54 217.2 180 64.4
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 1.1e-54 217.2 187 60.4
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 1.4e-54 216.9 195 61.5
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 1.8e-54 216.5 193 61.7
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 5.3e-54 214.9 190 58.9
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 7.0e-54 214.5 194 61.9
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 2.0e-53 213.0 203 58.1
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 5.9e-53 211.5 186 59.7
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 1.3e-52 210.3 194 60.3
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 1.7e-52 209.9 191 58.1
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 2.2e-52 209.5 199 59.3
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 2.2e-52 209.5 199 59.3
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 2.5e-51 206.1 205 57.6
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 2.5e-51 206.1 205 58.0
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 3.2e-51 205.7 181 62.4
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 3.2e-51 205.7 168 61.3
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 4.2e-51 205.3 187 57.8
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 7.2e-51 204.5 195 59.5
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 7.2e-51 204.5 201 57.2
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 8.0e-50 201.1 204 55.4
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 5.2e-49 198.4 192 60.4
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 1.2e-48 197.2 203 52.7
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.2e-48 197.2 203 52.7
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.2e-48 197.2 203 52.7
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.2e-48 197.2 203 52.7
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.0e-48 196.4 200 55.0
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 2.6e-48 196.1 203 52.2
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 3.4e-48 195.7 201 52.2
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 4.4e-48 195.3 201 53.7
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 2.2e-47 193.0 196 53.6
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 2.8e-47 192.6 186 53.8
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 4.8e-47 191.8 165 60.0
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 8.3e-47 191.0 187 55.1
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 8.3e-47 191.0 192 52.6
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 1.1e-46 190.7 141 69.5
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.4e-46 190.3 188 53.7
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 1.8e-46 189.9 189 52.4
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 1.8e-46 189.9 201 50.2
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.2e-45 187.2 188 53.2
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.6e-45 186.8 147 65.3
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 3.5e-45 185.7 204 54.9
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 5.9e-45 184.9 201 51.2
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 2.2e-44 183.0 179 53.6
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 5.0e-44 181.8 207 51.7
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 1.2e-42 177.2 200 50.5
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 7.5e-40 167.9 152 52.6
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 7.7e-37 157.9 157 52.9
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 4.4e-32 142.1 146 47.9
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 2.8e-31 139.4 157 50.3
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 8.9e-25 117.9 90 57.8
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.4e-22 110.5 121 48.8
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 9.5e-19 97.8 141 37.6
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 2.0e-16 90.1 142 37.3
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 4.4e-16 89.0 117 51.3
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 5.8e-16 88.6 140 35.0
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 7.5e-16 88.2 103 47.6
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.1e-14 84.3 120 46.7
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 1.6e-13 80.5 137 32.1
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 8.6e-12 74.7 70 55.7
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 8.6e-12 74.7 139 30.9
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.5e-11 73.9 137 31.4
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.9e-11 73.6 139 30.9


User provided reference genes

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