Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028302.2 Olea europaea HOM05D004366 ORTHO05D005058 2.3e-114 415.6 212 100.0
SalBow2G0488 Salvia bowleyana HOM05D004366 ORTHO05D005058 3.2e-84 315.5 204 78.9
Peaxi162Scf00026g03112 Petunia axillaris HOM05D004366 ORTHO05D005058 9.3e-84 313.9 204 78.9
Nitab4.5_0000141g0240 Nicotiana tabacum HOM05D004366 ORTHO05D005058 6.0e-83 311.2 204 77.5
Actinidia31203 Actinidia chinensis HOM05D004366 ORTHO05D005058 3.0e-82 308.9 204 77.9
CSS0021388 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 3.9e-82 308.5 204 78.4
CSS0003416 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.1e-81 307.0 204 77.9
Manes.01G186800 Manihot esculenta HOM05D004366 ORTHO05D005058 3.6e-80 302.0 204 77.5
ClCG05G024360 Citrullus lanatus HOM05D004366 ORTHO05D005058 6.2e-80 301.2 204 76.5
TWI12G0004 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 1.8e-79 299.7 204 77.0
Atru.chr11.1817 Acer truncatum HOM05D004366 ORTHO05D005058 2.4e-79 299.3 204 77.5
Rhsim12G0062000 Rhododendron simsii HOM05D004366 ORTHO05D005058 2.4e-79 299.3 204 76.5
Lj3C1038T15 Lonicera japonica HOM05D004366 ORTHO05D005058 4.0e-79 298.5 204 74.5
Prupe.1G272700 Prunus persica HOM05D004366 ORTHO05D005058 6.9e-79 297.7 204 77.0
Migut.L01306 Erythranthe guttata HOM05D004366 ORTHO05D005058 9.0e-79 297.4 204 74.0
Cc11_g13140 Coffea canephora HOM05D004366 ORTHO05D005058 1.2e-78 297.0 204 74.5
Solyc01g010810.4 Solanum lycopersicum HOM05D004366 ORTHO05D005058 2.0e-78 296.2 204 73.5
Sopen01g006640 Solanum pennellii HOM05D004366 ORTHO05D005058 2.6e-78 295.8 204 73.5
QL03p064520 Quercus lobata HOM05D004366 ORTHO05D005058 4.5e-78 295.0 204 77.0
PGSC0003DMG400006558 Solanum tuberosum HOM05D004366 ORTHO05D005058 5.8e-78 294.7 204 73.0
Sc11g0001840 Simmondsia chinensis HOM05D004366 ORTHO05D005058 7.6e-78 294.3 204 75.0
Cpa.g.sc128.8 Carica papaya HOM05D004366 ORTHO05D005058 1.7e-77 293.1 204 75.0
Hund05888 Selenicereus undatus HOM05D004366 ORTHO05D005058 2.9e-77 292.4 204 74.5
Aqoxy3G03355 Aquilegia oxysepala HOM05D004366 ORTHO05D005058 3.8e-77 292.0 197 75.1
SGA_v2.0_scaffold20G09275 Striga asiatica HOM05D004366 ORTHO05D005058 3.8e-77 292.0 204 73.5
Ciclev10032771m.g Citrus clementina HOM05D004366 ORTHO05D005058 6.4e-77 291.2 204 75.5
Eucgr.B03429 Eucalyptus grandis HOM05D004366 ORTHO05D005058 6.4e-77 291.2 204 75.5
Sed0027317 Sechium edule HOM05D004366 ORTHO05D005058 6.4e-77 291.2 204 75.0
CsaV3_5G032600 Cucumis sativus L. HOM05D004366 ORTHO05D005058 8.4e-77 290.8 204 74.5
MELO3C012087.2 Cucumis melo HOM05D004366 ORTHO05D005058 1.4e-76 290.0 204 74.0
CSS0022805 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 3.2e-76 288.9 204 74.0
Thecc.02G350500 Theobroma cacao HOM05D004366 ORTHO05D005058 4.2e-76 288.5 204 74.5
CAN.G473.145 Capsicum annuum HOM05D004366 ORTHO05D005058 5.4e-76 288.1 204 72.5
Glyma.01G045700 Glycine max HOM05D004366 ORTHO05D005058 7.1e-76 287.7 204 72.1
MD13G1073400 Malus domestica HOM05D004366 ORTHO05D005058 9.3e-76 287.3 204 74.0
CiPaw.06G083500 Carya illinoinensis HOM05D004366 ORTHO05D005058 1.2e-75 287.0 204 74.0
Gohir.D13G074000 Gossypium hirsutum HOM05D004366 ORTHO05D005058 1.2e-75 287.0 204 72.1
Ca_04775_v3 Cicer arietinum L. HOM05D004366 ORTHO05D005058 1.6e-75 286.6 204 73.0
MBI02_g23682_MAGBIO Magnolia biondii HOM05D004366 ORTHO05D005058 1.6e-75 286.6 204 74.0
Gorai.013G084600 Gossypium raimondii HOM05D004366 ORTHO05D005058 2.1e-75 286.2 204 72.1
Gohir.A13G073900 Gossypium hirsutum HOM05D004366 ORTHO05D005058 6.0e-75 284.6 204 71.6
Lj2g0005379 Lotus japonicus HOM05D004366 ORTHO05D005058 6.0e-75 284.6 204 73.5
Nitab4.5_0005950g0010 Nicotiana tabacum HOM05D004366 ORTHO05D005058 6.0e-75 284.6 204 73.5
COL.COLO4_22987 Corchorus olitorius HOM05D004366 ORTHO05D005058 7.9e-75 284.3 204 73.0
EL10Ac6g13190 Beta vulgaris HOM05D004366 ORTHO05D005058 2.3e-74 282.7 204 70.1
Glyma.02G106000 Glycine max HOM05D004366 ORTHO05D005058 2.3e-74 282.7 204 70.6
MD16G1074700 Malus domestica HOM05D004366 ORTHO05D005058 3.0e-74 282.3 204 73.5
Medtr5g039690 Medicago truncatula HOM05D004366 ORTHO05D005058 3.0e-74 282.3 204 71.6
Phvul.002G086500 Phaseolus vulgaris HOM05D004366 ORTHO05D005058 3.0e-74 282.3 204 71.1
Nn4g23131 Nelumbo nucifera HOM05D004366 ORTHO05D005058 3.9e-74 282.0 204 73.5
Lalb_Chr04g0256161 Lupinus albus HOM05D004366 ORTHO05D005058 1.5e-73 280.0 204 71.1
Medtr8g463620 Medicago truncatula HOM05D004366 ORTHO05D005058 1.9e-73 279.6 204 70.6
Oeu013622.3 Olea europaea HOM05D004366 ORTHO05D005058 1.9e-73 279.6 203 74.9
FvH4_4g31510 Fragaria vesca HOM05D004366 ORTHO05D005058 9.6e-73 277.3 204 71.6
Psat0s2341g0040 Pisum sativum HOM05D004366 ORTHO05D005058 1.3e-72 276.9 204 70.6
FAN12G0862 Fragaria x ananassa HOM05D004366 ORTHO05D005058 2.1e-72 276.2 204 71.1
TWI53G1314 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 2.8e-72 275.8 204 71.1
Lsat_1_v5_gn_8_52741 Lactuca sativa HOM05D004366 ORTHO05D005058 8.1e-72 274.2 197 72.6
RcHm_v2.0_Chr4g0440001 Rosa chinensis HOM05D004366 ORTHO05D005058 1.1e-71 273.9 204 70.6
PSO339G1196 Papaver somniferum HOM05D004366 ORTHO05D005058 1.4e-71 273.5 204 68.1
arahy.Tifrunner.gnm1.ann1.5V6A51 Arachis hypogaea HOM05D004366 ORTHO05D005058 3.1e-71 272.3 214 67.8
PSO384G0235 Papaver somniferum HOM05D004366 ORTHO05D005058 6.9e-71 271.2 204 68.1
FAN15G0746 Fragaria x ananassa HOM05D004366 ORTHO05D005058 2.0e-70 269.6 205 70.2
THA.LOC104822115 Tarenaya hassleriana HOM05D004366 ORTHO05D005058 4.5e-70 268.5 204 68.6
Thhalv10019150m.g Eutrema salsugineum HOM05D004366 ORTHO05D005058 5.8e-70 268.1 204 67.6
FAN17G2550 Fragaria x ananassa HOM05D004366 ORTHO05D005058 5.8e-70 268.1 204 69.1
Aa31LG4G11100 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.0e-69 267.3 201 66.7
AUR62026617 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.0e-69 267.3 204 69.1
FAN24G0452 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.3e-69 266.9 205 68.3
A07p31430 Brassica napus HOM05D004366 ORTHO05D005058 2.2e-69 266.2 197 69.5
BraA07t30778Z Brassica rapa HOM05D004366 ORTHO05D005058 2.2e-69 266.2 197 69.5
Haze_12025 Corylus avellana HOM05D004366 ORTHO05D005058 2.9e-69 265.8 204 70.6
ATR0564G205 Amborella trichopoda HOM05D004366 ORTHO05D005058 3.8e-69 265.4 204 68.1
FAN27G2895 Fragaria x ananassa HOM05D004366 ORTHO05D005058 4.9e-69 265.0 206 69.9
HanXRQChr08g0210471 Helianthus annuus HOM05D004366 ORTHO05D005058 6.5e-69 264.6 197 70.1
BcaC08g46415 Brassica carinata HOM05D004366 ORTHO05D005058 1.1e-68 263.8 204 66.2
C06p36720 Brassica napus HOM05D004366 ORTHO05D005058 1.1e-68 263.8 197 69.0
C06p43460 Brassica napus HOM05D004366 ORTHO05D005058 1.1e-68 263.8 204 66.2
BolC6t39421H Brassica oleracea HOM05D004366 ORTHO05D005058 1.1e-68 263.8 204 66.2
A07p36060 Brassica napus HOM05D004366 ORTHO05D005058 1.9e-68 263.1 204 66.2
BolC6t38782H Brassica oleracea HOM05D004366 ORTHO05D005058 1.9e-68 263.1 197 69.0
BraA07t31186Z Brassica rapa HOM05D004366 ORTHO05D005058 1.9e-68 263.1 204 66.2
CARHR062670 Cardamine hirsuta HOM05D004366 ORTHO05D005058 2.5e-68 262.7 204 65.2
AL2G28850 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 3.2e-68 262.3 204 66.2
PGR102G1003 Punica granatum HOM05D004366 ORTHO05D005058 3.2e-68 262.3 204 67.2
Sabra13G0046200 Salix brachista HOM05D004366 ORTHO05D005058 3.2e-68 262.3 204 67.2
unitig_22.g6909 Utricularia gibba HOM05D004366 ORTHO05D005058 3.2e-68 262.3 204 68.1
BcaB03g14744 Brassica carinata HOM05D004366 ORTHO05D005058 5.5e-68 261.5 204 65.7
PSO675G4203 Papaver somniferum HOM05D004366 ORTHO05D005058 5.5e-68 261.5 204 66.7
AT1G69680 Arabidopsis thaliana HOM05D004366 ORTHO05D005058 7.1e-68 261.2 204 66.2
Carub.0002s1634 Capsella rubella HOM05D004366 ORTHO05D005058 7.1e-68 261.2 204 66.7
AUR62005764 Chenopodium quinoa HOM05D004366 ORTHO05D005058 7.1e-68 261.2 186 73.1
HanXRQChr12g0362541 Helianthus annuus HOM05D004366 ORTHO05D005058 7.1e-68 261.2 197 68.0
Sp5g24810 Schrenkiella parvula HOM05D004366 ORTHO05D005058 1.2e-67 260.4 204 65.7
AUR62034912 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.6e-67 260.0 185 72.4
arahy.Tifrunner.gnm1.ann1.QXP3RB Arachis hypogaea HOM05D004366 ORTHO05D005058 2.7e-67 259.2 170 75.9
FvH4_2g13310 Fragaria vesca HOM05D004366 ORTHO05D005058 2.7e-67 259.2 206 67.5
ECA233G4070 Erigeron canadensis HOM05D004366 ORTHO05D005058 3.9e-66 255.4 195 68.2
VMungo1215G0984 Vigna mungo HOM05D004366 ORTHO05D005058 5.1e-66 255.0 187 71.7
CANSAT54G1616 Cannabis sativa HOM05D004366 ORTHO05D005058 1.1e-65 253.8 204 64.7
Os04g0459600 Oryza sativa ssp. japonica HOM05D004366 ORTHO05D005058 1.1e-65 253.8 196 66.3
Hma1.2p1_0598F.1_g186660 Hydrangea macrophylla HOM05D004366 ORTHO05D005058 1.5e-65 253.4 334 48.2
CANSAT25G1390 Cannabis sativa HOM05D004366 ORTHO05D005058 1.9e-65 253.1 204 64.7
Sp3g28750 Schrenkiella parvula HOM05D004366 ORTHO05D005058 2.5e-65 252.7 207 62.8
Potri.013G049900 Populus trichocarpa HOM05D004366 ORTHO05D005058 1.3e-64 250.4 193 67.4
BcaB03g15490 Brassica carinata HOM05D004366 ORTHO05D005058 1.6e-64 250.0 198 66.2
Zm00001eb080830 Zea mays HOM05D004366 ORTHO05D005058 4.8e-64 248.4 196 65.3
AL7G43580 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 6.2e-64 248.1 196 65.3
AUR62028793 Chenopodium quinoa HOM05D004366 ORTHO05D005058 2.4e-63 246.1 204 64.2
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 4.1e-63 245.4 197 62.4
GSVIVG01020010001 Vitis vinifera HOM05D004366 ORTHO05D005058 9.0e-63 244.2 194 68.6
Aa31sc15G10 Aethionema arabicum HOM05D004366 ORTHO05D005058 2.0e-62 243.0 167 72.5
Ah.03g135200 Amaranthus hybridus HOM05D004366 ORTHO05D005058 2.5e-60 236.1 204 61.8
BcaC08g45875 Brassica carinata HOM05D004366 ORTHO05D005058 9.3e-60 234.2 200 64.0
Duzib248G1524 Durio zibethinus HOM05D004366 ORTHO05D005058 7.9e-59 231.1 204 62.7
SEGI_03925 Sequoiadendron giganteum HOM05D004366 ORTHO05D005058 1.0e-58 230.7 204 57.4
SGA_v2.0_scaffold53G19387 Striga asiatica HOM05D004366 ORTHO05D005058 3.9e-58 228.8 241 58.1
TPR.G39101 Trifolium pratense HOM05D004366 ORTHO05D005058 1.4e-55 220.3 178 66.3
vmacro01244 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 6.9e-55 218.0 254 51.6
Aa31LG9G5650 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.4e-52 210.3 217 54.4
DCAR_027406 Daucus carota HOM05D002775 ORTHO05D005058 2.7e-51 206.1 128 79.7
Cfa008996 Carpinus fangiana HOM05D004366 ORTHO05D005058 7.9e-51 204.5 223 54.7
FAN22G2022 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.5e-49 200.3 239 51.5
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 9.1e-47 191.0 217 52.5
Pp3c9_14930 Physcomitrium patens HOM05D004366 ORTHO05D005058 6.5e-45 184.9 204 48.0
Dinv16634 Davidia involucrata HOM05D004366 ORTHO05D005058 9.4e-44 181.0 124 73.4
AagrBONN_evm.TU.Sc2ySwM_344.5131 Anthoceros agrestis HOM05D004366 ORTHO05D005058 6.1e-43 178.3 194 50.0
SalBow2G3183 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.5e-41 173.7 111 81.1
TAR629G2773 Trochodendron aralioides HOM05D004366 ORTHO05D005058 3.7e-40 169.1 124 67.7
arahy.Tifrunner.gnm1.ann1.4LW61L Arachis hypogaea HOM05D004366 ORTHO05D005058 6.3e-40 168.3 109 76.1
SMO147G0050 Selaginella moellendorffii HOM05D004366 ORTHO05D005058 4.1e-39 165.6 198 47.0
CBR_g17957 Chara braunii HOM05D004366 ORTHO05D005058 7.2e-36 154.8 203 43.8
AagrBONN_evm.TU.Sc2ySwM_362.1786 Anthoceros agrestis HOM05D004366 ORTHO05D005058 1.8e-34 150.2 169 49.1
MSTRG.695 Avicennia marina HOM05D004366 ORTHO05D005058 5.7e-33 145.2 97 76.3
MD11G1061500 Malus domestica HOM05D004366 ORTHO05D005058 1.7e-32 143.7 124 62.1
Pp3c15_14240 Physcomitrium patens HOM05D004366 ORTHO05D005058 8.2e-32 141.4 156 48.7
Potri.019G023800 Populus trichocarpa HOM05D004366 ORTHO05D005058 7.7e-30 134.8 101 64.4
CSS0000370 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 9.4e-28 127.9 95 69.5
Lj6A789T49 Lonicera japonica HOM05D004366 ORTHO05D005058 2.7e-27 126.3 79 81.0
Mapoly0113s0045 Marchantia polymorpha HOM05D004366 ORTHO05D005058 6.1e-27 125.2 184 40.8
arahy.Tifrunner.gnm1.ann1.MY0RSE Arachis hypogaea HOM05D004366 ORTHO05D005058 1.4e-26 124.0 115 59.1
CSS0042124 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 2.3e-26 123.2 97 66.0
arahy.Tifrunner.gnm1.ann1.J913Y5 Arachis hypogaea HOM05D004366 ORTHO05D005058 2.8e-24 116.3 96 62.5
CAN.G154.11 Capsicum annuum HOM05D004366 ORTHO05D005058 4.8e-24 115.5 130 48.5
arahy.Tifrunner.gnm1.ann1.D4KK35 Arachis hypogaea HOM05D004366 ORTHO05D005058 2.4e-23 113.2 116 56.0
arahy.Tifrunner.gnm1.ann1.N9R1JE Arachis hypogaea HOM05D004366 ORTHO05D005058 2.2e-21 106.7 96 61.5
MCO13G325 Micromonas commoda HOM05D004366 ORTHO05D005058 2.9e-21 106.3 195 35.9
PGSC0003DMG400015729 Solanum tuberosum HOM05D004366 ORTHO05D005058 1.9e-20 103.6 92 62.0
arahy.Tifrunner.gnm1.ann1.8CQ436 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.2e-19 100.9 68 72.1
Rhsim11G0057700 Rhododendron simsii HOM05D004366 ORTHO05D005058 3.6e-19 99.4 64 82.8
BcaC07g37109 Brassica carinata HOM05D004366 ORTHO05D005058 8.8e-18 94.7 74 62.2
C08p04780 Brassica napus HOM05D004366 ORTHO05D005058 2.6e-17 93.2 70 64.3
FAN07G2952 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.3e-16 90.9 64 71.9
BolC8t47277H Brassica oleracea HOM05D004366 ORTHO05D005058 4.9e-16 89.0 75 61.3
Lsat_1_v5_gn_1_103541 Lactuca sativa HOM05D004366 ORTHO05D005058 5.4e-15 85.5 117 43.6
SalBow1G5797 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.0e-13 81.3 45 84.4
arahy.Tifrunner.gnm1.ann1.NKT7G2 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.5e-12 77.4 102 48.0
PRCOL_00002884 Prasinoderma coloniale HOM05D004366 ORTHO05D005058 5.6e-12 75.5 166 30.1
Cre05.g244850 Chlamydomonas reinhardtii HOM05D004366 ORTHO05D005058 7.3e-12 75.1 201 30.8
CANSAT54G0841 Cannabis sativa HOM05D001400 ORTHO05D001795 9.5e-12 74.7 49 67.3
PSO339G3282 Papaver somniferum HOM05D000073 ORTHO05D000033 2.1e-11 73.6 53 69.8
AUR62028525 Chenopodium quinoa HOM05D004366 ORTHO05D000022 4.4e-09 65.9 47 63.8
TAR624G1239 Trochodendron aralioides HOM05D049658 ORTHO05D051498 3.7e-08 62.8 39 79.5
TAR626G1697 Trochodendron aralioides HOM05D049658 ORTHO05D051498 2.4e-07 60.1 40 77.5
Atru.chr9.1643 Acer truncatum HOM05D004366 ORTHO05D005058 2.0e-06 57.0 42 66.7
A08p04480 Brassica napus HOM05D004366 ORTHO05D005058 2.7e-06 56.6 70 42.9


User provided reference genes

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