Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028270.1 Olea europaea HOM05D001860 ORTHO05D004922 2.0e-178 629.0 321 100.0
SalBow2G3316 Salvia bowleyana HOM05D001860 ORTHO05D004922 3.7e-108 395.6 317 64.7
MSTRG.7790 Avicennia marina HOM05D001860 ORTHO05D004922 1.7e-105 386.7 333 63.4
SGA_v2.0_scaffold172G38956 Striga asiatica HOM05D001860 ORTHO05D004922 7.4e-101 371.3 316 60.8
CAN.G771.16 Capsicum annuum HOM05D001860 ORTHO05D004922 1.1e-99 367.5 293 63.1
Solyc06g084030.3 Solanum lycopersicum HOM05D001860 ORTHO05D004922 1.5e-98 363.6 295 62.7
Sopen06g035410 Solanum pennellii HOM05D001860 ORTHO05D004922 5.9e-98 361.7 295 62.4
Hma1.2p1_1079F.1_g254970 Hydrangea macrophylla HOM05D001860 ORTHO05D004922 1.0e-97 360.9 264 69.3
CSS0022995 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 1.4e-96 357.1 265 66.8
Haze_11992 Corylus avellana HOM05D001860 ORTHO05D004922 3.2e-96 355.9 327 59.3
Ciclev10032245m.g Citrus clementina HOM05D001860 ORTHO05D004922 1.1e-93 347.4 321 56.1
Cfa008963 Carpinus fangiana HOM05D001860 ORTHO05D004922 7.4e-93 344.7 290 61.7
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 9.7e-93 344.4 289 63.0
Cc11_g12800 Coffea canephora HOM05D001860 ORTHO05D004922 9.7e-93 344.4 324 55.9
Atru.chr11.1760 Acer truncatum HOM05D001860 ORTHO05D004922 6.3e-92 341.7 266 63.9
Migut.L01273 Erythranthe guttata HOM05D001860 ORTHO05D004922 3.1e-91 339.3 222 73.9
Potri.008G088500 Populus trichocarpa HOM05D001860 ORTHO05D004922 4.1e-91 339.0 318 57.9
TWI31G0055 Tripterygium wilfordii HOM05D001860 ORTHO05D004922 5.3e-91 338.6 266 63.5
Aqoxy5G04114 Aquilegia oxysepala HOM05D001860 ORTHO05D004922 3.5e-90 335.9 312 56.4
CiPaw.06G086900 Carya illinoinensis HOM05D001860 ORTHO05D004922 4.5e-90 335.5 263 62.7
PGSC0003DMG400020063 Solanum tuberosum HOM05D001860 ORTHO05D004922 1.0e-89 334.3 250 65.6
GSVIVG01019959001 Vitis vinifera HOM05D001860 ORTHO05D004922 1.0e-89 334.3 263 64.6
QL03p068521 Quercus lobata HOM05D001860 ORTHO05D004922 1.3e-89 334.0 284 58.8
HanXRQChr17g0545281 Helianthus annuus HOM05D001860 ORTHO05D004922 2.2e-89 333.2 276 63.4
TAR629G3174 Trochodendron aralioides HOM05D001860 ORTHO05D004922 2.2e-89 333.2 325 55.7
Thecc.02G343500 Theobroma cacao HOM05D001860 ORTHO05D004922 2.9e-89 332.8 264 63.6
Lj3A1035T53 Lonicera japonica HOM05D001860 ORTHO05D004922 5.0e-89 332.0 222 73.0
Rhsim12G0064600 Rhododendron simsii HOM05D001860 ORTHO05D004922 1.9e-88 330.1 290 58.6
Manes.05G104100 Manihot esculenta HOM05D001860 ORTHO05D004922 3.2e-88 329.3 269 62.1
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.6e-87 327.0 286 56.6
Lsat_1_v5_gn_3_52040 Lactuca sativa HOM05D001860 ORTHO05D004922 2.1e-87 326.6 266 62.8
Lj2g0002858 Lotus japonicus HOM05D001860 ORTHO05D004922 2.1e-87 326.6 264 62.9
Nn3g17288 Nelumbo nucifera HOM05D001860 ORTHO05D004922 2.7e-87 326.2 284 59.2
RcHm_v2.0_Chr4g0439511 Rosa chinensis HOM05D001860 ORTHO05D004922 2.7e-87 326.2 269 59.9
QL03p068503 Quercus lobata HOM05D001860 ORTHO05D004922 4.7e-87 325.5 314 54.8
MELO3C012111.2 Cucumis melo HOM05D001860 ORTHO05D004922 6.1e-87 325.1 322 53.4
arahy.Tifrunner.gnm1.ann1.0UW6S5 Arachis hypogaea HOM05D001860 ORTHO05D004922 8.0e-87 324.7 321 55.1
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 8.0e-87 324.7 286 55.9
Nitab4.5_0006433g0040 Nicotiana tabacum HOM05D001860 ORTHO05D004922 1.0e-86 324.3 222 69.8
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.4e-86 323.9 284 56.7
ECA246G1483 Erigeron canadensis HOM05D001860 ORTHO05D004922 3.0e-86 322.8 227 69.2
Gorai.013G087000 Gossypium raimondii HOM05D001860 ORTHO05D004922 3.0e-86 322.8 263 60.1
QL03p068489 Quercus lobata HOM05D001860 ORTHO05D004922 3.0e-86 322.8 276 59.4
Eucgr.B03211 Eucalyptus grandis HOM05D001860 ORTHO05D004922 3.9e-86 322.4 323 54.5
Duzib248G0566 Durio zibethinus HOM05D001860 ORTHO05D004922 5.2e-86 322.0 264 62.1
MBI05_g10765_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004922 8.8e-86 321.2 300 56.3
Sed0020595 Sechium edule HOM05D001860 ORTHO05D004922 8.8e-86 321.2 316 54.4
Hund25222 Selenicereus undatus HOM05D001860 ORTHO05D004922 8.8e-86 321.2 263 61.2
CsaV3_5G032890 Cucumis sativus L. HOM05D001860 ORTHO05D004922 1.1e-85 320.9 325 51.1
DCAR_026253 Daucus carota HOM05D001016 ORTHO05D003396 1.1e-85 320.9 304 57.2
Peaxi162Scf01530g00038 Petunia axillaris HOM05D001860 ORTHO05D004922 1.1e-85 320.9 224 67.9
Ca_04822_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004922 2.0e-85 320.1 287 57.8
CsaV3_5G032900 Cucumis sativus L. HOM05D001860 ORTHO05D004922 2.0e-85 320.1 293 55.3
Nitab4.5_0001044g0130 Nicotiana tabacum HOM05D001860 ORTHO05D004922 2.6e-85 319.7 222 68.5
Phvul.002G083300 Phaseolus vulgaris HOM05D001860 ORTHO05D004922 4.4e-85 318.9 316 54.1
Glyma.02G109300 Glycine max HOM05D001860 ORTHO05D004922 1.3e-84 317.4 323 55.1
unitig_26.g10298 Utricularia gibba HOM05D001860 ORTHO05D004922 4.8e-84 315.5 292 55.5
MD16G1070300 Malus domestica HOM05D001860 ORTHO05D004922 1.8e-83 313.5 304 54.3
PSO478G0757 Papaver somniferum HOM05D001860 ORTHO05D004922 2.4e-83 313.2 298 55.7
ClCG05G024130 Citrullus lanatus HOM05D001860 ORTHO05D004922 3.1e-83 312.8 278 57.2
arahy.Tifrunner.gnm1.ann1.F2WL4X Arachis hypogaea HOM05D001860 ORTHO05D004922 5.3e-83 312.0 355 50.7
EL10Ac6g13236 Beta vulgaris HOM05D001860 ORTHO05D004922 5.3e-83 312.0 264 61.4
FvH4_4g31120 Fragaria vesca HOM05D001860 ORTHO05D004922 5.3e-83 312.0 287 55.4
CANSAT64G2732 Cannabis sativa HOM05D001860 ORTHO05D004922 7.0e-83 311.6 266 59.8
arahy.Tifrunner.gnm1.ann1.WF3EDY Arachis hypogaea HOM05D001860 ORTHO05D004922 2.0e-82 310.1 355 50.4
vmacro01268 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 2.0e-82 310.1 305 55.1
PSO017G0798 Papaver somniferum HOM05D001860 ORTHO05D004922 3.5e-82 309.3 295 55.9
Psat2g116760 Pisum sativum HOM05D001860 ORTHO05D004922 5.9e-82 308.5 264 58.3
Medtr5g041780 Medicago truncatula HOM05D001860 ORTHO05D004922 1.7e-81 307.0 293 54.9
Sabra08G0066100 Salix brachista HOM05D001860 ORTHO05D004922 1.7e-81 307.0 401 45.9
Os02g0744100 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004922 8.5e-81 304.7 265 57.7
COL.COLO4_22943 Corchorus olitorius HOM05D001860 ORTHO05D004922 2.5e-80 303.1 283 55.8
Zm00001eb194590 Zea mays HOM05D001860 ORTHO05D004922 8.0e-79 298.1 265 57.4
Lalb_Chr04g0255941 Lupinus albus HOM05D001860 ORTHO05D004922 5.2e-78 295.4 335 48.4
BraA07t30786Z Brassica rapa HOM05D001860 ORTHO05D004922 1.5e-77 293.9 276 55.8
TPR.G36138 Trifolium pratense HOM05D001860 ORTHO05D004922 2.0e-77 293.5 217 64.5
A07p35850 Brassica napus HOM05D001860 ORTHO05D004922 4.4e-77 292.4 282 53.2
AT1G69523 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 5.7e-77 292.0 267 53.9
AUR62032811 Chenopodium quinoa HOM05D001860 ORTHO05D004922 7.5e-77 291.6 223 63.7
MELO3C012110.2 Cucumis melo HOM05D001860 ORTHO05D004922 7.5e-77 291.6 334 48.5
ATR0564G196 Amborella trichopoda HOM05D001860 ORTHO05D004922 1.3e-76 290.8 266 55.6
CDE04G1474 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 1.7e-76 290.4 269 56.1
BcaB03g14715 Brassica carinata HOM05D001860 ORTHO05D004922 3.7e-76 289.3 273 53.1
C06p40330 Brassica napus HOM05D001860 ORTHO05D004922 8.3e-76 288.1 300 49.3
Aa31LG4G11250 Aethionema arabicum HOM05D001860 ORTHO05D004922 1.1e-75 287.7 271 53.9
THA.LOC104822044 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 1.1e-75 287.7 294 51.4
Sp5g24640 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.8e-75 287.0 272 55.1
BcaB03g15478 Brassica carinata HOM05D001860 ORTHO05D004922 3.1e-75 286.2 317 51.1
BcaC08g46392 Brassica carinata HOM05D001860 ORTHO05D004922 3.1e-75 286.2 298 49.3
THA.LOC104822045 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 4.1e-75 285.8 283 51.9
Sp5g24630 Schrenkiella parvula HOM05D001860 ORTHO05D004922 7.0e-75 285.0 266 52.6
Thhalv10018913m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 1.6e-74 283.9 271 54.6
HPP92_016837 Vanilla planifolia HOM05D001860 ORTHO05D004922 1.6e-74 283.9 310 48.4
Carub.0002s1616 Capsella rubella HOM05D001860 ORTHO05D004922 2.0e-74 283.5 266 53.4
BolC6t39396H Brassica oleracea HOM05D001860 ORTHO05D004922 3.5e-74 282.7 274 52.6
BolC6t39398H Brassica oleracea HOM05D001860 ORTHO05D004922 3.5e-74 282.7 274 52.6
BolC6t39399H Brassica oleracea HOM05D001860 ORTHO05D004922 3.5e-74 282.7 299 48.8
BraA07t31170Z Brassica rapa HOM05D001860 ORTHO05D004922 3.5e-74 282.7 269 53.2
A07p35830 Brassica napus HOM05D001860 ORTHO05D004922 5.9e-74 282.0 269 53.2
C06p40340 Brassica napus HOM05D001860 ORTHO05D004922 5.9e-74 282.0 274 52.6
BraA07t31169Z Brassica rapa HOM05D001860 ORTHO05D004922 5.9e-74 282.0 269 53.2
Carub.0002s1617 Capsella rubella HOM05D001860 ORTHO05D004922 5.9e-74 282.0 317 49.5
BcaB03g14720 Brassica carinata HOM05D001860 ORTHO05D004922 7.7e-74 281.6 298 49.0
vmacro01267 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 1.0e-73 281.2 371 45.0
A07p35840 Brassica napus HOM05D001860 ORTHO05D004922 1.7e-73 280.4 269 52.8
BraA07t31171Z Brassica rapa HOM05D001860 ORTHO05D004922 1.7e-73 280.4 277 52.7
AL2G28650 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 2.2e-73 280.0 313 48.9
SEGI_35280 Sequoiadendron giganteum HOM05D001860 ORTHO05D004922 6.5e-73 278.5 281 51.2
AT1G69526 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 1.2e-71 274.2 272 52.9
Carub.0002s1615 Capsella rubella HOM05D001860 ORTHO05D004922 3.6e-71 272.7 263 53.2
BcaC08g46390 Brassica carinata HOM05D001860 ORTHO05D004922 4.7e-71 272.3 248 54.4
FAN17G3114 Fragaria x ananassa HOM05D001860 ORTHO05D004922 5.2e-70 268.9 266 53.0
CDE06G2440 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 6.8e-70 268.5 222 55.9
CARHR062460 Cardamine hirsuta HOM05D001860 ORTHO05D004922 3.4e-69 266.2 322 46.6
THA.LOC104822184 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 2.2e-68 263.5 221 57.0
C06p40360 Brassica napus HOM05D001860 ORTHO05D004922 9.1e-67 258.1 240 54.2
Gohir.A13G076700 Gossypium hirsutum HOM05D001860 ORTHO05D004922 1.1e-64 251.1 198 61.6
Gohir.D13G076400 Gossypium hirsutum HOM05D001860 ORTHO05D004922 1.5e-64 250.8 198 61.1
CARHR062480 Cardamine hirsuta HOM05D001860 ORTHO05D004922 1.4e-62 244.2 197 61.4
Prupe.1G276900 Prunus persica HOM05D001860 ORTHO05D004922 2.0e-61 240.4 230 55.2
SMO239G0167 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 9.8e-61 238.0 268 47.8
Pp3c24_6910 Physcomitrium patens HOM05D001860 ORTHO05D004922 2.8e-60 236.5 222 53.2
AagrBONN_evm.TU.Sc2ySwM_368.914 Anthoceros agrestis HOM05D001860 ORTHO05D004922 8.3e-60 235.0 287 45.3
Oeu028272.1 Olea europaea HOM05D001860 ORTHO05D004922 4.1e-59 232.6 126 93.7
AL2G28640 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 1.5e-56 224.2 215 51.6
Sp5g24610 Schrenkiella parvula HOM05D001860 ORTHO05D004922 2.5e-56 223.4 215 53.0
Carub.0002s1614 Capsella rubella HOM05D001860 ORTHO05D004922 4.3e-56 222.6 222 51.8
Mapoly0002s0191 Marchantia polymorpha HOM05D001860 ORTHO05D004922 7.3e-56 221.9 221 50.2
BcaC08g46388 Brassica carinata HOM05D001860 ORTHO05D004922 9.5e-56 221.5 218 51.8
PGR102G3336 Punica granatum HOM05D001860 ORTHO05D004922 2.8e-55 219.9 174 60.3
BcaB03g14714 Brassica carinata HOM05D001860 ORTHO05D004922 6.1e-55 218.8 218 51.8
A07p35820 Brassica napus HOM05D001482 ORTHO05D001499 6.1e-55 218.8 218 51.8
BraA07t31168Z Brassica rapa HOM05D001482 ORTHO05D001499 6.1e-55 218.8 218 51.8
BolC6t39394H Brassica oleracea HOM05D001482 ORTHO05D001499 8.0e-55 218.4 218 51.8
Thhalv10019583m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 1.4e-54 217.6 225 50.2
CSS0019961 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 5.2e-54 215.7 164 64.0
CARHR062450 Cardamine hirsuta HOM05D001860 ORTHO05D004922 8.9e-54 214.9 216 51.9
AT1G69520 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 4.4e-53 212.6 216 50.5
Ah.02g129590 Amaranthus hybridus HOM05D001860 ORTHO05D004922 6.0e-50 202.2 304 42.1
C06p40380 Brassica napus HOM05D001482 ORTHO05D001499 1.1e-48 198.0 227 47.6
Sc11g0002060 Simmondsia chinensis HOM05D001860 ORTHO05D004922 1.1e-48 198.0 209 56.5
SMO137G0248 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 2.2e-44 183.7 197 45.7
Dinv16666 Davidia involucrata HOM05D001860 ORTHO05D004922 1.1e-43 181.4 174 57.5
AUR62005816 Chenopodium quinoa HOM05D001860 ORTHO05D004922 3.5e-42 176.4 139 64.0
Aa31LG4G11270 Aethionema arabicum HOM05D001860 ORTHO05D004922 1.7e-41 174.1 236 43.6
BcaB03g14717 Brassica carinata HOM05D001860 ORTHO05D004922 3.0e-41 173.3 172 50.6
Sp5g24620 Schrenkiella parvula HOM05D001860 ORTHO05D004922 8.1e-39 165.2 140 57.1
BcaC08g45887 Brassica carinata HOM05D001860 ORTHO05D004922 3.1e-38 163.3 131 63.4
A07p31570 Brassica napus HOM05D001860 ORTHO05D004922 1.1e-35 154.8 131 61.1
C06p36870 Brassica napus HOM05D000005 ORTHO05D042562 1.2e-34 151.4 186 49.5
CBR_g41443 Chara braunii HOM05D001860 ORTHO05D004922 2.7e-34 150.2 214 39.3
C06p40370 Brassica napus HOM05D001860 ORTHO05D004922 4.6e-34 149.4 117 62.4
BolC6t38800H Brassica oleracea HOM05D000005 ORTHO05D042562 1.3e-33 147.9 120 63.3
Cpa.g.sc350.4 Carica papaya HOM05D001860 ORTHO05D004922 1.7e-33 147.5 188 47.9
Thhalv10019188m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 3.0e-33 146.7 147 51.0
MCO09G753 Micromonas commoda HOM05D001860 ORTHO05D004922 1.2e-29 134.8 148 46.6
PRCOL_00003589 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 5.8e-29 132.5 189 41.3
PRCOL_00000783 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 7.6e-29 132.1 185 40.5
MCO03G556 Micromonas commoda HOM05D001860 ORTHO05D004922 3.8e-28 129.8 226 35.4
Cre07.g342550 Chlamydomonas reinhardtii HOM05D001860 ORTHO05D004922 3.9e-25 119.8 251 33.5
CSS0034144 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 7.3e-24 115.5 83 65.1
CSS0016207 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 2.4e-22 110.5 76 64.5
VMungo1383G2064 Vigna mungo HOM05D001860 ORTHO05D004922 1.6e-18 97.8 89 51.7
arahy.Tifrunner.gnm1.ann1.661SM0 Arachis hypogaea HOM05D001860 ORTHO05D004922 3.5e-18 96.7 85 61.2
Thecc.01G276100 Theobroma cacao HOM05D001860 ORTHO05D004922 3.0e-17 93.6 84 50.0
Actinidia19883 Actinidia chinensis HOM05D001860 ORTHO05D004922 1.4e-14 84.7 98 48.0
CBR_g34579 Chara braunii HOM05D001860 ORTHO05D019626 2.9e-12 77.0 181 34.3
PRCOL_00001331 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 1.6e-10 71.2 144 31.9
Cfa024139 Carpinus fangiana HOM05D001860 ORTHO05D004922 2.1e-10 70.9 222 27.0
MCO03G203 Micromonas commoda HOM05D023757 ORTHO05D024904 6.0e-10 69.3 151 33.1
Zm00001eb254460 Zea mays HOM05D001860 ORTHO05D004922 1.8e-09 67.8 76 50.0
MCO11G161 Micromonas commoda HOM05D019459 ORTHO05D019626 2.8e-07 60.5 135 34.1
CDE08G0834 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 6.2e-07 59.3 58 48.3


User provided reference genes

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