Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 2.3e-80 302.8 231 100.0
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 2.1e-49 199.9 240 77.1
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 1.4e-40 170.6 257 59.9
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 1.4e-37 160.6 260 58.5
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 3.2e-37 159.5 253 63.2
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 4.5e-31 139.0 111 79.3
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 7.6e-31 138.3 247 60.3
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 1.4e-29 134.0 237 47.7
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 2.7e-28 129.8 232 55.6
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 2.7e-28 129.8 232 55.6
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 7.9e-28 128.3 250 59.2
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 6.7e-27 125.2 259 54.1
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 1.1e-26 124.4 111 73.0
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 9.6e-26 121.3 106 64.2
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 2.1e-25 120.2 109 58.7
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 3.7e-25 119.4 115 68.7
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 6.2e-25 118.6 107 72.0
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.1e-24 117.9 115 60.0
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.8e-24 117.1 240 48.8
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 1.8e-24 117.1 117 56.4
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 2.4e-24 116.7 109 70.6
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 1.2e-23 114.4 118 67.8
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.2e-23 114.4 104 61.5
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.2e-23 114.4 117 68.4
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.5e-23 114.0 104 60.6
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 2.6e-23 113.2 104 60.6
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 9.9e-23 111.3 116 65.5
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 1.3e-22 110.9 115 53.9
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.7e-22 110.5 119 52.9
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 2.2e-22 110.2 107 70.1
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 3.8e-22 109.4 115 66.1
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 4.9e-22 109.0 112 66.1
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 6.4e-22 108.6 114 54.4
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 8.4e-22 108.2 114 65.8
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 5.5e-21 105.5 108 54.6
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 7.1e-21 105.1 119 52.9
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 9.3e-21 104.8 122 60.7
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 3.5e-20 102.8 115 52.2
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 6.0e-20 102.1 114 64.9
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 7.9e-20 101.7 116 52.6
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 1.8e-19 100.5 102 51.0
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 2.3e-19 100.1 114 51.8
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 3.9e-19 99.4 117 49.6
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 8.7e-19 98.2 118 62.7
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 1.1e-18 97.8 106 50.9
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 1.5e-18 97.4 115 60.9
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 2.5e-18 96.7 117 62.4
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 2.5e-18 96.7 102 50.0
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 3.3e-18 96.3 117 58.1
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 4.3e-18 95.9 118 64.4
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 5.6e-18 95.5 118 60.2
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 9.6e-18 94.7 116 58.6
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 9.6e-18 94.7 188 59.0
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 1.3e-17 94.4 116 59.5
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 1.6e-17 94.0 103 50.5
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 6.2e-17 92.0 110 50.0
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 8.2e-17 91.7 115 60.0
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.1e-16 91.3 117 59.8
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 1.4e-16 90.9 245 53.9
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.8e-16 90.5 91 58.2
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.8e-16 90.5 91 58.2
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.8e-16 90.5 91 56.0
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 2.4e-16 90.1 109 65.1
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.4e-16 90.1 91 58.2
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 3.1e-16 89.7 121 58.7
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 6.9e-16 88.6 114 59.6
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 6.9e-16 88.6 116 59.5
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 1.2e-15 87.8 103 58.3
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 1.2e-15 87.8 103 58.3
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.5e-15 87.4 115 58.3
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 2.0e-15 87.0 221 48.9
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 2.6e-15 86.7 116 56.9
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 3.4e-15 86.3 116 59.5
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 5.8e-15 85.5 113 58.4
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 7.6e-15 85.1 109 58.7
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 7.6e-15 85.1 114 59.6
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.3e-14 84.3 102 56.9
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 1.3e-14 84.3 116 61.2
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 1.3e-14 84.3 259 48.3
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 2.2e-14 83.6 116 56.0
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 4.9e-14 82.4 116 56.0
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 6.5e-14 82.0 101 54.5
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 6.5e-14 82.0 108 51.9
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.1e-13 81.3 240 53.3
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 1.9e-13 80.5 115 57.4
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 1.9e-13 80.5 109 55.0
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 2.5e-13 80.1 114 55.3
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 3.2e-13 79.7 115 55.7
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 3.2e-13 79.7 113 55.8
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 2.7e-12 76.6 116 55.2
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 2.7e-12 76.6 99 42.4
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 2.7e-12 76.6 110 57.3
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.5e-12 76.3 111 55.9
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 4.6e-12 75.9 75 54.7
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 6.0e-12 75.5 112 53.6
QL03p070946 Quercus lobata HOM05D016418 ORTHO05D018826 1.3e-11 74.3 86 66.3
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.3e-11 73.6 84 52.4
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 2.3e-11 73.6 73 53.4
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 2.3e-11 73.6 109 56.0
ClCG09G022180 Citrullus lanatus HOM05D016418 ORTHO05D018826 3.9e-11 72.8 87 65.5
CSS0004591 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 5.1e-11 72.4 43 74.4
CSS0005644 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 5.1e-11 72.4 43 74.4
CSS0041468 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 5.1e-11 72.4 43 74.4
CSS0042536 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 5.1e-11 72.4 43 74.4
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 5.1e-11 72.4 109 55.0
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 6.7e-11 72.0 70 51.4
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.7e-11 72.0 104 54.8
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 8.7e-11 71.6 105 40.0
CSS0022896 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 1.9e-10 70.5 43 72.1
CSS0000772 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 4.3e-10 69.3 43 69.8
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 7.4e-10 68.6 76 46.1
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 9.7e-10 68.2 107 43.0
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 1.3e-09 67.8 102 40.2
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 1.3e-09 67.8 100 39.0
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 3.7e-09 66.2 99 41.4
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 6.9e-08 62.0 78 44.9
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 9.0e-08 61.6 118 50.8
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.9e-06 56.6 64 48.4
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 3.8e-06 56.2 102 39.2


User provided reference genes

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