Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028135.2 Olea europaea HOM05D005541 ORTHO05D006875 1.6e-103 379.4 188 100.0
Oeu028018.1 Olea europaea HOM05D005541 ORTHO05D006875 9.1e-91 337.0 236 75.8
Migut.J01236 Erythranthe guttata HOM05D005541 ORTHO05D006875 5.7e-61 238.0 206 62.6
SGA_v2.0_scaffold45G17077 Striga asiatica HOM05D005541 ORTHO05D006875 9.8e-61 237.3 208 62.0
Dinv36447 Davidia involucrata HOM05D005541 ORTHO05D006875 5.4e-59 231.5 208 61.1
MSTRG.6077 Avicennia marina HOM05D005541 ORTHO05D006875 9.2e-59 230.7 208 63.5
Dinv41444 Davidia involucrata HOM05D005541 ORTHO05D006875 2.0e-58 229.6 208 60.6
Rhsim03G0253300 Rhododendron simsii HOM05D005541 ORTHO05D006875 3.8e-57 225.3 206 61.7
CSS0024399 Camellia sinensis var. sinensis HOM05D005541 ORTHO05D006875 7.3e-56 221.1 212 58.5
Ciclev10009016m.g Citrus clementina HOM05D005541 ORTHO05D006875 9.5e-56 220.7 202 59.4
Oeu012222.1 Olea europaea HOM05D005541 ORTHO05D006875 4.7e-55 218.4 201 59.7
Cc06_g07640 Coffea canephora HOM05D005541 ORTHO05D006875 6.1e-55 218.0 189 61.9
Actinidia14228 Actinidia chinensis HOM05D005541 ORTHO05D006875 2.3e-54 216.1 206 58.7
vmacro06115 Vaccinium macrocarpon HOM05D005541 ORTHO05D006875 3.0e-54 215.7 178 63.5
GSVIVG01012859001 Vitis vinifera HOM05D005541 ORTHO05D006875 3.0e-54 215.7 202 59.9
TWI32G1342 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 6.8e-54 214.5 191 60.7
TWI63G1467 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 6.8e-54 214.5 202 58.4
Lj7A439T20 Lonicera japonica HOM05D005541 ORTHO05D006875 8.9e-54 214.2 209 58.4
Thecc.09G137600 Theobroma cacao HOM05D005541 ORTHO05D006875 1.2e-53 213.8 202 58.9
TWI63G0008 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 1.5e-53 213.4 187 61.0
CiPaw.04G177400 Carya illinoinensis HOM05D005541 ORTHO05D006875 3.4e-53 212.2 181 61.9
RcHm_v2.0_Chr2g0087061 Rosa chinensis HOM05D005541 ORTHO05D006875 7.5e-53 211.1 189 59.8
Peaxi162Scf00088g00520 Petunia axillaris HOM05D005541 ORTHO05D006875 9.8e-53 210.7 204 55.4
QL02p090804 Quercus lobata HOM05D005541 ORTHO05D006875 9.8e-53 210.7 193 61.7
FvH4_1g02000 Fragaria vesca HOM05D005541 ORTHO05D006875 2.2e-52 209.5 189 60.8
Gohir.A13G202000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 3.7e-52 208.8 177 62.1
HanXRQChr03g0063361 Helianthus annuus HOM05D005541 ORTHO05D006875 3.7e-52 208.8 189 58.2
Sopen07g003450 Solanum pennellii HOM05D005541 ORTHO05D006875 4.9e-52 208.4 208 55.3
FAN28G0031 Fragaria x ananassa HOM05D005541 ORTHO05D006875 6.4e-52 208.0 181 61.9
Gohir.D08G101500 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.1e-51 207.2 174 64.4
Gohir.D13G207800 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.1e-51 207.2 177 62.1
Gorai.004G109500 Gossypium raimondii HOM05D005541 ORTHO05D006875 1.1e-51 207.2 174 64.4
Gorai.013G236700 Gossypium raimondii HOM05D005541 ORTHO05D006875 1.1e-51 207.2 177 62.1
Gohir.D13G208000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.4e-51 206.8 175 62.9
Lj6g0025347 Lotus japonicus HOM05D005541 ORTHO05D006875 1.4e-51 206.8 189 59.8
Sed0021107 Sechium edule HOM05D005541 ORTHO05D006875 1.4e-51 206.8 178 63.5
Atru.chr7.2014 Acer truncatum HOM05D005541 ORTHO05D006875 1.8e-51 206.5 172 64.5
Actinidia26358 Actinidia chinensis HOM05D005541 ORTHO05D006875 1.8e-51 206.5 174 62.1
Nitab4.5_0002286g0050 Nicotiana tabacum HOM05D005541 ORTHO05D006875 1.8e-51 206.5 204 56.9
TAR100G0002 Trochodendron aralioides HOM05D005541 ORTHO05D006875 2.4e-51 206.1 208 58.2
TAR170G0003 Trochodendron aralioides HOM05D005541 ORTHO05D006875 2.4e-51 206.1 208 58.2
Aqoxy7G03592 Aquilegia oxysepala HOM05D005541 ORTHO05D006875 3.2e-51 205.7 206 56.8
Nn8g39653 Nelumbo nucifera HOM05D005541 ORTHO05D006875 3.2e-51 205.7 207 58.0
CANSAT11G2438 Cannabis sativa HOM05D005541 ORTHO05D006875 4.1e-51 205.3 178 63.5
ECA240G1064 Erigeron canadensis HOM05D005541 ORTHO05D006875 4.1e-51 205.3 206 57.3
Sabra06G0044200 Salix brachista HOM05D005541 ORTHO05D006875 4.1e-51 205.3 191 58.1
ClCG06G011880 Citrullus lanatus HOM05D005541 ORTHO05D006875 5.4e-51 204.9 178 61.8
FAN26G0160 Fragaria x ananassa HOM05D005541 ORTHO05D006875 5.4e-51 204.9 192 59.9
Manes.14G119600 Manihot esculenta HOM05D005541 ORTHO05D006875 5.4e-51 204.9 204 56.9
Medtr2g450740 Medicago truncatula HOM05D005541 ORTHO05D006875 5.4e-51 204.9 189 59.8
Nitab4.5_0002845g0020 Nicotiana tabacum HOM05D005541 ORTHO05D006875 5.4e-51 204.9 204 56.4
Cfa002261 Carpinus fangiana HOM05D005541 ORTHO05D006875 9.2e-51 204.1 183 57.9
Ca_03100_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 9.2e-51 204.1 189 59.3
Solyc07g007380.4 Solanum lycopersicum HOM05D005541 ORTHO05D006875 9.2e-51 204.1 205 55.6
Duzib168G0734 Durio zibethinus HOM05D005541 ORTHO05D006875 1.6e-50 203.4 177 61.0
Sed0001591 Sechium edule HOM05D005541 ORTHO05D006875 1.6e-50 203.4 178 61.2
Eucgr.C00480 Eucalyptus grandis HOM05D005541 ORTHO05D006875 2.0e-50 203.0 190 58.4
Gohir.A08G090600 Gossypium hirsutum HOM05D005541 ORTHO05D006875 2.0e-50 203.0 174 63.8
Lsat_1_v5_gn_7_46800 Lactuca sativa HOM05D005541 ORTHO05D006875 2.0e-50 203.0 193 57.0
Potri.018G118200 Populus trichocarpa HOM05D005541 ORTHO05D006875 2.0e-50 203.0 189 59.8
Sc08g0006020 Simmondsia chinensis HOM05D005541 ORTHO05D006875 2.0e-50 203.0 206 55.3
Potri.006G061600 Populus trichocarpa HOM05D005541 ORTHO05D006875 2.7e-50 202.6 189 58.7
arahy.Tifrunner.gnm1.ann1.9T6TW9 Arachis hypogaea HOM05D005541 ORTHO05D006875 3.5e-50 202.2 189 58.2
arahy.Tifrunner.gnm1.ann1.H1LUDS Arachis hypogaea HOM05D005541 ORTHO05D006875 3.5e-50 202.2 189 58.2
Cpa.g.sc46.69 Carica papaya HOM05D005541 ORTHO05D006875 3.5e-50 202.2 182 60.4
Lalb_Chr08g0233581 Lupinus albus HOM05D005541 ORTHO05D006875 3.5e-50 202.2 178 60.1
CAN.G1281.6 Capsicum annuum HOM05D005541 ORTHO05D006875 4.6e-50 201.8 201 56.2
Glyma.15G198100 Glycine max HOM05D005541 ORTHO05D006875 4.6e-50 201.8 202 55.4
HanXRQChr09g0241861 Helianthus annuus HOM05D005541 ORTHO05D006875 5.9e-50 201.4 190 56.3
VMungo1309G2820 Vigna mungo HOM05D005541 ORTHO05D006875 5.9e-50 201.4 189 58.2
PGR142G4414 Punica granatum HOM05D005541 ORTHO05D006875 7.8e-50 201.1 190 57.4
Lalb_Chr11g0073101 Lupinus albus HOM05D005541 ORTHO05D006875 1.0e-49 200.7 189 57.7
Phvul.009G212200 Phaseolus vulgaris HOM05D005541 ORTHO05D006875 1.3e-49 200.3 189 58.2
MELO3C010277.2 Cucumis melo HOM05D005541 ORTHO05D006875 3.9e-49 198.7 183 60.7
PGSC0003DMG400030689 Solanum tuberosum HOM05D005541 ORTHO05D006875 3.9e-49 198.7 204 54.9
Glyma.09G091600 Glycine max HOM05D005541 ORTHO05D006875 6.6e-49 198.0 178 58.4
Psat1g021320 Pisum sativum HOM05D005541 ORTHO05D006875 8.6e-49 197.6 191 58.1
MD15G1162200 Malus domestica HOM05D005541 ORTHO05D006875 1.1e-48 197.2 193 54.4
CsaV3_1G028340 Cucumis sativus L. HOM05D005541 ORTHO05D006875 1.9e-48 196.4 183 59.6
AUR62020012 Chenopodium quinoa HOM05D005541 ORTHO05D006875 3.6e-47 192.2 196 55.1
Ah.09g224130 Amaranthus hybridus HOM05D005541 ORTHO05D006875 6.2e-47 191.4 196 55.6
MD02G1018200 Malus domestica HOM05D005541 ORTHO05D006875 6.2e-47 191.4 180 56.1
Duzib187G1717 Durio zibethinus HOM05D005541 ORTHO05D006875 1.4e-46 190.3 149 65.8
AUR62011221 Chenopodium quinoa HOM05D005541 ORTHO05D006875 2.3e-46 189.5 194 53.6
COL.COLO4_33365 Corchorus olitorius HOM05D005541 ORTHO05D006875 4.0e-46 188.7 140 70.0
Prupe.7G257600 Prunus persica HOM05D005541 ORTHO05D006875 4.0e-46 188.7 180 56.1
HPP92_020539 Vanilla planifolia HOM05D005541 ORTHO05D006875 8.9e-46 187.6 194 51.5
THA.LOC104808948 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 4.4e-45 185.3 198 52.0
EL10Ac8g18781 Beta vulgaris HOM05D005541 ORTHO05D006875 7.5e-45 184.5 206 52.4
PSO478G5201 Papaver somniferum HOM05D005541 ORTHO05D006875 1.7e-44 183.3 170 60.0
MBI15_g25760_MAGBIO Magnolia biondii HOM05D005541 ORTHO05D006875 1.4e-43 180.3 194 52.6
PSO017G3833 Papaver somniferum HOM05D005541 ORTHO05D006875 1.9e-43 179.9 170 58.8
Hund09308 Selenicereus undatus HOM05D005541 ORTHO05D006875 2.4e-43 179.5 208 51.9
DCAR_009345 Daucus carota HOM05D005541 ORTHO05D006875 2.0e-42 176.4 183 54.6
THA.LOC104815290 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 4.6e-42 175.3 174 54.0
CDE02G2611 Ceratophyllum demersum HOM05D005541 ORTHO05D006875 1.3e-41 173.7 179 50.8
unitig_0.g507 Utricularia gibba HOM05D005541 ORTHO05D006875 1.5e-40 170.2 131 64.9
AT5G35080 Arabidopsis thaliana HOM05D005541 ORTHO05D006875 3.6e-39 165.6 188 48.4
Haze_25444 Corylus avellana HOM05D005541 ORTHO05D006875 2.3e-38 162.9 166 52.4
A05p11950 Brassica napus HOM05D005541 ORTHO05D006875 5.2e-38 161.8 182 48.9
BraA05t20138Z Brassica rapa HOM05D005541 ORTHO05D006875 5.2e-38 161.8 182 48.9
BcaC01g05834 Brassica carinata HOM05D005541 ORTHO05D006875 1.2e-37 160.6 181 47.5
ATR0767G116 Amborella trichopoda HOM05D005541 ORTHO05D006875 1.5e-37 160.2 189 45.5
BcaC02g11442 Brassica carinata HOM05D005541 ORTHO05D006875 1.5e-37 160.2 180 48.3
C04p15500 Brassica napus HOM05D005541 ORTHO05D006875 1.5e-37 160.2 180 48.3
BolC3t14579H Brassica oleracea HOM05D005541 ORTHO05D006875 1.5e-37 160.2 180 47.8
BolC4t23121H Brassica oleracea HOM05D005541 ORTHO05D006875 1.5e-37 160.2 180 48.3
CARHR217140 Cardamine hirsuta HOM05D005541 ORTHO05D006875 1.5e-37 160.2 187 48.1
Aa31LG10G11810 Aethionema arabicum HOM05D005541 ORTHO05D006875 2.0e-37 159.8 150 55.3
C03p21960 Brassica napus HOM05D005541 ORTHO05D006875 2.0e-37 159.8 172 48.8
BcaB02g10581 Brassica carinata HOM05D005541 ORTHO05D006875 2.6e-37 159.5 189 46.0
Thhalv10002066m.g Eutrema salsugineum HOM05D005541 ORTHO05D006875 4.4e-37 158.7 181 48.1
Sp4g15930 Schrenkiella parvula HOM05D005541 ORTHO05D006875 1.3e-36 157.1 180 47.2
BcaB01g03929 Brassica carinata HOM05D005541 ORTHO05D006875 1.7e-36 156.8 189 45.5
Carub.0007s3085 Capsella rubella HOM05D005541 ORTHO05D006875 2.2e-36 156.4 178 47.8
Pp3c2_6810 Physcomitrium patens HOM05D005541 ORTHO05D006875 1.0e-33 147.5 181 46.4
SEGI_36543 Sequoiadendron giganteum HOM05D005541 ORTHO05D006875 1.0e-33 147.5 120 60.0
Zm00001eb136970 Zea mays HOM05D005541 ORTHO05D006875 1.4e-30 137.1 182 44.5
Zm00001eb028460 Zea mays HOM05D005541 ORTHO05D006875 2.4e-30 136.3 168 46.4
Pp3c1_27810 Physcomitrium patens HOM05D005541 ORTHO05D006875 2.0e-29 133.3 191 40.8
Ca_27153_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 7.1e-27 124.8 87 69.0
FAN19G0623 Fragaria x ananassa HOM05D005541 ORTHO05D006875 2.7e-26 122.9 114 60.5
Mapoly0020s0022 Marchantia polymorpha HOM05D005541 ORTHO05D006875 1.3e-25 120.6 173 43.9
SMO174G0227 Selaginella moellendorffii HOM05D005541 ORTHO05D006875 3.0e-25 119.4 187 40.6
Actinidia38706 Actinidia chinensis HOM05D005541 ORTHO05D006875 8.6e-25 117.9 121 51.2
AagrBONN_evm.TU.Sc2ySwM_228.2742 Anthoceros agrestis HOM05D005541 ORTHO05D006875 4.4e-21 105.5 160 38.1
CBR_g45403 Chara braunii HOM05D005541 ORTHO05D006875 3.6e-15 85.9 131 38.9
HanXRQChr03g0068961 Helianthus annuus HOM05D005541 ORTHO05D006875 1.1e-11 74.3 54 66.7
RcHm_v2.0_Chr1g0314561 Rosa chinensis HOM05D005541 ORTHO05D006875 4.2e-11 72.4 70 52.9
RcHm_v2.0_Chr5g0069501 Rosa chinensis HOM05D005541 ORTHO05D006875 2.3e-09 66.6 58 55.2
MCO11G854 Micromonas commoda HOM05D005541 ORTHO05D006875 5.1e-09 65.5 125 32.8
PRCOL_00001292 Prasinoderma coloniale HOM05D005541 ORTHO05D006875 1.3e-07 60.8 143 30.8
RcHm_v2.0_Chr7g0241391 Rosa chinensis HOM05D005541 ORTHO05D006875 2.4e-06 56.6 43 60.5


User provided reference genes

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