Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028073.1 Olea europaea HOM05D003848 ORTHO05D004616 1.7e-181 639.8 499 100.0
Oeu041715.2 Olea europaea HOM05D003848 ORTHO05D004616 4.5e-129 465.7 537 66.3
SGA_v2.0_scaffold1G00491 Striga asiatica HOM05D003848 ORTHO05D004616 4.0e-93 346.3 522 63.4
GSVIVG01001165001 Vitis vinifera HOM05D003848 ORTHO05D004616 1.2e-86 324.7 510 65.5
CiPaw.08G106300 Carya illinoinensis HOM05D003848 ORTHO05D004616 3.6e-86 323.2 531 55.2
Dinv32920 Davidia involucrata HOM05D003848 ORTHO05D004616 6.8e-85 318.9 425 68.2
Migut.D00312 Erythranthe guttata HOM05D003848 ORTHO05D004616 6.8e-85 318.9 562 60.7
vmacro18863 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 3.7e-83 313.2 510 63.9
MSTRG.21553 Avicennia marina HOM05D003848 ORTHO05D004616 1.4e-82 311.2 587 51.8
Cc00_g04130 Coffea canephora HOM05D003848 ORTHO05D004616 1.8e-82 310.8 389 72.5
Cfa003508 Carpinus fangiana HOM05D003848 ORTHO05D004616 5.4e-82 309.3 511 58.3
Nitab4.5_0005156g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 5.4e-82 309.3 415 65.3
vmacro19513 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 7.8e-81 305.4 522 57.1
Prupe.8G239200 Prunus persica HOM05D003848 ORTHO05D004616 1.7e-80 304.3 540 59.4
unitig_0.g1040 Utricularia gibba HOM05D003848 ORTHO05D004616 2.3e-80 303.9 513 57.5
Hma1.2p1_0822F.1_g224390 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 3.9e-80 303.1 469 60.3
Cfa006159 Carpinus fangiana HOM05D003848 ORTHO05D004616 4.3e-79 299.7 520 58.8
Nitab4.5_0006700g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 9.5e-79 298.5 414 70.3
Solyc11g071660.1 Solanum lycopersicum HOM05D003848 ORTHO05D004616 2.1e-78 297.4 540 59.8
Actinidia24902 Actinidia chinensis HOM05D003848 ORTHO05D004616 3.6e-78 296.6 542 62.0
Sopen11g029330 Solanum pennellii HOM05D003848 ORTHO05D004616 3.6e-78 296.6 538 59.5
TWI59G1147 Tripterygium wilfordii HOM05D003848 ORTHO05D004616 4.7e-78 296.2 543 58.7
Haze_16066 Corylus avellana HOM05D003848 ORTHO05D004616 6.2e-78 295.8 518 59.1
Cc01_g10690 Coffea canephora HOM05D003848 ORTHO05D004616 1.8e-77 294.3 606 52.5
Haze_04691 Corylus avellana HOM05D003848 ORTHO05D004616 2.3e-77 293.9 502 60.0
Thecc.01G276600 Theobroma cacao HOM05D003848 ORTHO05D004616 2.3e-77 293.9 572 57.2
Lj2C1116T3 Lonicera japonica HOM05D003848 ORTHO05D004616 3.1e-77 293.5 533 57.4
HanXRQChr01g0002971 Helianthus annuus HOM05D003848 ORTHO05D004616 5.2e-77 292.7 436 63.3
PGSC0003DMG400046756 Solanum tuberosum HOM05D003848 ORTHO05D004616 8.9e-77 292.0 539 59.2
CAN.G439.4 Capsicum annuum HOM05D003848 ORTHO05D004616 1.5e-76 291.2 525 56.8
Potri.002G051500 Populus trichocarpa HOM05D003848 ORTHO05D004616 4.4e-76 289.7 534 55.1
Lj1C175T4 Lonicera japonica HOM05D003848 ORTHO05D004616 7.5e-76 288.9 533 55.7
VMungo0720G2447 Vigna mungo HOM05D003848 ORTHO05D004616 7.5e-76 288.9 527 58.6
Peaxi162Scf00217g00025 Petunia axillaris HOM05D003848 ORTHO05D004616 9.8e-76 288.5 515 62.5
arahy.Tifrunner.gnm1.ann1.X3NAFX Arachis hypogaea HOM05D003848 ORTHO05D004616 1.3e-75 288.1 553 57.0
Nn1g02285 Nelumbo nucifera HOM05D003848 ORTHO05D004616 1.3e-75 288.1 558 55.7
QL01p012613 Quercus lobata HOM05D003848 ORTHO05D004616 1.3e-75 288.1 526 60.6
Cpa.g.sc52.49 Carica papaya HOM05D003848 ORTHO05D004616 1.7e-75 287.7 551 55.4
Psat4g156760 Pisum sativum HOM05D003848 ORTHO05D004616 2.2e-75 287.3 529 59.0
arahy.Tifrunner.gnm1.ann1.ARWK2P Arachis hypogaea HOM05D003848 ORTHO05D004616 2.9e-75 287.0 553 55.7
Aqoxy2G03377 Aquilegia oxysepala HOM05D003848 ORTHO05D004616 6.4e-75 285.8 557 55.5
Phvul.007G172800 Phaseolus vulgaris HOM05D003848 ORTHO05D004616 6.4e-75 285.8 529 57.1
RcHm_v2.0_Chr4g0409951 Rosa chinensis HOM05D003848 ORTHO05D004616 1.1e-74 285.0 522 62.1
COL.COLO4_09072 Corchorus olitorius HOM05D003848 ORTHO05D004616 2.4e-74 283.9 515 50.9
Gohir.A12G004500 Gossypium hirsutum HOM05D003848 ORTHO05D004616 3.2e-74 283.5 601 55.1
TAR369G1095 Trochodendron aralioides HOM05D003848 ORTHO05D004616 1.6e-73 281.2 574 51.9
MD03G1262900 Malus domestica HOM05D003848 ORTHO05D004616 2.7e-73 280.4 522 60.2
Gorai.008G004000 Gossypium raimondii HOM05D003848 ORTHO05D004616 6.0e-73 279.3 601 54.1
Atru.chr5.1462 Acer truncatum HOM05D003848 ORTHO05D004616 7.8e-73 278.9 542 53.9
FAN17G2080 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.0e-72 278.5 402 70.9
HPP92_009020 Vanilla planifolia HOM05D003848 ORTHO05D004616 1.0e-72 278.5 400 57.8
Glyma.02G146600 Glycine max HOM05D003848 ORTHO05D004616 3.9e-72 276.6 540 58.0
MD11G1283600 Malus domestica HOM05D003848 ORTHO05D004616 5.0e-72 276.2 561 56.3
Glyma.10G027400 Glycine max HOM05D003848 ORTHO05D004616 6.6e-72 275.8 532 58.6
Gohir.D12G004200 Gossypium hirsutum HOM05D003848 ORTHO05D004616 8.6e-72 275.4 601 53.7
FvH4_4g12190 Fragaria vesca HOM05D003848 ORTHO05D004616 1.1e-71 275.0 526 61.0
Lj5g0005692 Lotus japonicus HOM05D003848 ORTHO05D004616 1.1e-71 275.0 522 54.2
TPR.G28157 Trifolium pratense HOM05D003848 ORTHO05D004616 1.1e-71 275.0 200 76.0
SHI27493 Sapria himalayana HOM05D004058 ORTHO05D001984 1.5e-71 274.6 155 87.1
THA.LOC104801238 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 1.5e-71 274.6 423 68.3
FAN22G1557 Fragaria x ananassa HOM05D003848 ORTHO05D004616 2.5e-71 273.9 183 77.6
Ciclev10019827m.g Citrus clementina HOM05D003848 ORTHO05D004616 4.3e-71 273.1 538 58.2
FAN07G0259 Fragaria x ananassa HOM05D003848 ORTHO05D004616 4.3e-71 273.1 529 60.5
Rhsim01G0273900 Rhododendron simsii HOM05D003848 ORTHO05D004616 4.3e-71 273.1 578 52.4
MBI07_g03188_MAGBIO Magnolia biondii HOM05D003848 ORTHO05D004616 5.6e-71 272.7 559 48.8
Manes.05G077600 Manihot esculenta HOM05D003848 ORTHO05D004616 9.5e-71 271.9 562 53.7
Sabra05G0161100 Salix brachista HOM05D003848 ORTHO05D004616 9.5e-71 271.9 416 60.1
ECA248G3600 Erigeron canadensis HOM05D003848 ORTHO05D004616 1.2e-70 271.6 410 64.4
Lsat_1_v5_gn_5_184160 Lactuca sativa HOM05D003848 ORTHO05D004616 2.1e-70 270.8 574 57.0
TAR633G0718 Trochodendron aralioides HOM05D003848 ORTHO05D004616 3.6e-70 270.0 575 53.0
Lalb_Chr06g0162931 Lupinus albus HOM05D003848 ORTHO05D004616 1.4e-69 268.1 410 67.3
DCAR_000720 Daucus carota HOM05D003848 ORTHO05D004616 2.3e-69 267.3 403 67.0
CANSAT01G1819 Cannabis sativa HOM05D003848 ORTHO05D004616 6.8e-69 265.8 190 74.7
Potri.005G210900 Populus trichocarpa HOM05D003848 ORTHO05D004616 1.5e-68 264.6 531 59.5
PGR119G0967 Punica granatum HOM05D003848 ORTHO05D004616 2.0e-68 264.2 568 58.1
BcaB01g02014 Brassica carinata HOM05D003848 ORTHO05D004616 2.6e-68 263.8 389 67.6
Aa31LG5G2360 Aethionema arabicum HOM05D003848 ORTHO05D004616 3.4e-68 263.5 429 64.6
ATR0824G270 Amborella trichopoda HOM05D003848 ORTHO05D004616 3.4e-68 263.5 205 70.7
ATR0332G007 Amborella trichopoda HOM05D003848 ORTHO05D004616 5.8e-68 262.7 204 70.1
SEGI_20713 Sequoiadendron giganteum HOM05D003848 ORTHO05D004616 5.8e-68 262.7 201 72.1
MELO3C009735.2 Cucumis melo HOM05D003848 ORTHO05D004616 7.5e-68 262.3 566 53.5
CsaV3_3G039920 Cucumis sativus L. HOM05D003848 ORTHO05D004616 7.5e-68 262.3 561 54.7
CDE06G2067 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 9.8e-68 261.9 474 48.1
Zm00001eb314820 Zea mays HOM05D003848 ORTHO05D004616 1.7e-67 261.2 157 84.7
THA.LOC104825995 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 2.9e-67 260.4 414 66.9
FAN22G0164 Fragaria x ananassa HOM05D003848 ORTHO05D004616 4.9e-67 259.6 370 72.2
Medtr8g028640 Medicago truncatula HOM05D003848 ORTHO05D004616 2.4e-66 257.3 519 56.5
AL6G50290 Arabidopsis lyrata HOM05D003848 ORTHO05D004616 7.1e-66 255.8 409 67.0
Sc24g0003320 Simmondsia chinensis HOM05D003848 ORTHO05D004616 7.1e-66 255.8 163 81.6
Ca_09749_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 1.6e-65 254.6 546 57.7
Carub.0006s3439 Capsella rubella HOM05D003848 ORTHO05D004616 2.1e-65 254.2 413 64.9
Ah.02g110950 Amaranthus hybridus HOM05D003848 ORTHO05D004616 2.7e-65 253.8 164 81.7
AagrBONN_evm.TU.Sc2ySwM_362.1784 Anthoceros agrestis HOM05D003848 ORTHO05D004616 6.0e-65 252.7 203 68.5
AUR62003538 Chenopodium quinoa HOM05D003848 ORTHO05D004616 6.0e-65 252.7 162 80.2
AUR62017852 Chenopodium quinoa HOM05D003848 ORTHO05D004616 6.0e-65 252.7 162 80.2
AT4G02720 Arabidopsis thaliana HOM05D003848 ORTHO05D004616 7.8e-65 252.3 408 66.2
EL10Ac5g10556 Beta vulgaris HOM05D003848 ORTHO05D004616 1.7e-64 251.1 163 81.0
Mapoly0051s0007 Marchantia polymorpha HOM05D003848 ORTHO05D004616 1.7e-64 251.1 164 78.0
ClCG10G016420 Citrullus lanatus HOM05D003848 ORTHO05D004616 6.6e-64 249.2 563 53.5
Thhalv10028691m.g Eutrema salsugineum HOM05D003848 ORTHO05D004616 8.6e-64 248.8 422 64.2
Sp6g02650 Schrenkiella parvula HOM05D003848 ORTHO05D004616 1.1e-63 248.4 408 64.7
Duzib177G1090 Durio zibethinus HOM05D003848 ORTHO05D004616 2.5e-63 247.3 154 81.2
Pp3c9_17960 Physcomitrium patens HOM05D003848 ORTHO05D004616 2.5e-63 247.3 198 66.2
SMO231G0049 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 3.3e-63 246.9 160 77.5
SMO351G0411 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 3.3e-63 246.9 160 77.5
CARHR251050 Cardamine hirsuta HOM05D003848 ORTHO05D004616 4.3e-63 246.5 160 78.8
BcaC01g01560 Brassica carinata HOM05D003848 ORTHO05D004616 5.6e-63 246.1 167 76.6
CBR_g4136 Chara braunii HOM05D003848 ORTHO05D004616 7.3e-63 245.7 156 78.2
C03p93080 Brassica napus HOM05D003848 ORTHO05D004616 1.6e-62 244.6 163 77.3
AagrBONN_evm.TU.Sc2ySwM_344.5133 Anthoceros agrestis HOM05D003848 ORTHO05D004616 2.1e-62 244.2 154 81.2
Sed0011367 Sechium edule HOM05D003848 ORTHO05D004616 4.7e-62 243.0 559 53.3
BolC8t51344H Brassica oleracea HOM05D003848 ORTHO05D004616 6.2e-62 242.7 389 63.0
Hund11854 Selenicereus undatus HOM05D003848 ORTHO05D004616 1.4e-61 241.5 205 68.3
Manes.01G206800 Manihot esculenta HOM05D003848 ORTHO05D004616 6.8e-61 239.2 536 44.8
A09p02120 Brassica napus HOM05D003848 ORTHO05D004616 1.7e-59 234.6 387 63.0
C03p93150 Brassica napus HOM05D003848 ORTHO05D004616 1.7e-59 234.6 155 77.4
C08p37610 Brassica napus HOM05D003848 ORTHO05D004616 3.7e-59 233.4 386 61.7
PSO832G2619 Papaver somniferum HOM05D003848 ORTHO05D004616 4.9e-59 233.0 577 49.4
BolC9t53150H Brassica oleracea HOM05D003848 ORTHO05D004616 8.4e-59 232.3 387 63.0
PSO210G3188 Papaver somniferum HOM05D003848 ORTHO05D004616 8.4e-59 232.3 566 51.8
BcaC04g24009 Brassica carinata HOM05D003848 ORTHO05D004616 1.1e-58 231.9 387 63.6
BraA09t35861Z Brassica rapa HOM05D003848 ORTHO05D004616 1.1e-58 231.9 386 61.9
BcaC01g01554 Brassica carinata HOM05D003848 ORTHO05D004616 5.4e-58 229.6 162 74.1
C09p02220 Brassica napus HOM05D003848 ORTHO05D004616 5.4e-58 229.6 154 76.6
BolC3t21610H Brassica oleracea HOM05D003848 ORTHO05D004616 1.6e-57 228.0 153 75.8
C03p93070 Brassica napus HOM05D003848 ORTHO05D004616 6.0e-57 226.1 132 84.1
C03p93100 Brassica napus HOM05D003848 ORTHO05D004616 6.6e-56 222.6 387 65.4
BcaC01g01558 Brassica carinata HOM05D003848 ORTHO05D004616 8.6e-56 222.2 132 83.3
A04p19390 Brassica napus HOM05D003848 ORTHO05D004616 3.3e-55 220.3 160 75.0
A09p54740 Brassica napus HOM05D003848 ORTHO05D004616 4.3e-55 219.9 129 84.5
BcaC02g08380 Brassica carinata HOM05D003848 ORTHO05D004616 9.6e-55 218.8 164 72.0
QL03p072399 Quercus lobata HOM05D003848 ORTHO05D004616 9.6e-55 218.8 506 51.2
BraA04t17534Z Brassica rapa HOM05D003848 ORTHO05D004616 1.2e-54 218.4 162 74.1
A09p30470 Brassica napus HOM05D003848 ORTHO05D004616 2.8e-54 217.2 133 82.0
C09p02210 Brassica napus HOM05D003848 ORTHO05D004616 2.8e-54 217.2 129 83.7
BolC3t21613H Brassica oleracea HOM05D003848 ORTHO05D004616 4.7e-54 216.5 387 58.9
BcaC01g01561 Brassica carinata HOM05D003848 ORTHO05D004616 1.8e-53 214.5 387 42.6
C04p54970 Brassica napus HOM05D003848 ORTHO05D004616 3.1e-53 213.8 153 75.2
BolC4t27032H Brassica oleracea HOM05D003848 ORTHO05D004616 3.1e-53 213.8 153 75.2
TPR.G23082 Trifolium pratense HOM05D003848 ORTHO05D004616 1.2e-52 211.8 129 83.7
Rhsim10G0030500 Rhododendron simsii HOM05D003848 ORTHO05D004616 3.4e-52 210.3 357 59.4
CDE07G1463 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 4.2e-50 203.4 161 67.7
SalBow4G2167 Salvia bowleyana HOM05D003848 ORTHO05D004616 9.3e-50 202.2 188 61.7
SGA_v2.0_scaffold138G35328 Striga asiatica HOM05D003848 ORTHO05D004616 5.1e-48 196.4 154 68.2
Oeu017054.1 Olea europaea HOM05D004271 ORTHO05D006011 6.6e-48 196.1 314 62.1
Ca_04836_v3 Cicer arietinum L. HOM05D001515 ORTHO05D004616 2.8e-46 190.7 146 70.5
Nn4g26302 Nelumbo nucifera HOM05D003848 ORTHO05D004616 7.6e-44 182.6 100 91.0
C03p93140 Brassica napus HOM05D003848 ORTHO05D004616 1.9e-42 177.9 113 80.5
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 4.2e-42 176.8 382 53.1
BcaC03g13677 Brassica carinata HOM05D003848 ORTHO05D004616 8.7e-40 169.1 133 69.9
MCO02G035 Micromonas commoda HOM05D003848 ORTHO05D004616 4.3e-39 166.8 106 79.2
BcaC03g16168 Brassica carinata HOM05D003848 ORTHO05D004616 9.0e-37 159.1 103 76.7
Hma1.2p1_0667F.1_g199770 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 1.5e-36 158.3 161 59.0
PRCOL_00001828 Prasinoderma coloniale HOM05D003848 ORTHO05D004616 2.4e-34 151.0 105 70.5
Cre01.g032250 Chlamydomonas reinhardtii HOM05D003848 ORTHO05D004616 4.6e-33 146.7 100 69.0
Actinidia21120 Actinidia chinensis HOM05D003848 ORTHO05D004616 1.1e-29 135.6 154 53.2
BraA09t40884Z Brassica rapa HOM05D003848 ORTHO05D004616 1.8e-29 134.8 84 79.8
Haze_27548 Corylus avellana HOM05D003848 ORTHO05D004616 4.0e-29 133.7 112 55.4
BraA09t38617Z Brassica rapa HOM05D003848 ORTHO05D004616 5.3e-29 133.3 85 80.0
Os09g0455400 Oryza sativa ssp. japonica HOM05D003848 ORTHO05D004616 1.5e-28 131.7 75 90.7
FAN22G1718 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.6e-25 121.7 306 64.4
C02p39120 Brassica napus HOM05D003848 ORTHO05D004616 4.6e-25 120.2 85 70.6
BolC2t09922H Brassica oleracea HOM05D003848 ORTHO05D004616 1.3e-24 118.6 85 69.4
unitig_0.g1042 Utricularia gibba HOM05D003848 ORTHO05D004616 4.3e-23 113.6 65 87.7
vmacro19512 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 1.4e-21 108.6 497 43.3
BNapus_Darmor_BZH_scaffold_38p02440 Brassica napus HOM05D003848 ORTHO05D004616 9.0e-21 105.9 68 77.9
BNapus_Darmor_BZH_scaffold_38p02460 Brassica napus HOM05D003848 ORTHO05D004616 1.5e-20 105.1 66 78.8
Lj1A173G45 Lonicera japonica HOM05D003848 ORTHO05D004616 3.8e-19 100.5 180 45.0
BolC2t06954H Brassica oleracea HOM05D003848 ORTHO05D004616 7.2e-18 96.3 69 75.4
MD07G1100600 Malus domestica HOM05D003848 ORTHO05D004616 2.7e-17 94.4 56 85.7
Ca_05843_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 4.3e-15 87.0 53 81.1
Prupe.6G167600 Prunus persica HOM05D003848 ORTHO05D004616 6.3e-14 83.2 56 76.8
C03p93060 Brassica napus HOM05D003848 ORTHO05D004616 3.4e-12 77.4 86 47.7
FAN22G0082 Fragaria x ananassa HOM05D003848 ORTHO05D035678 2.7e-09 67.8 86 54.7
BolC3t21614H Brassica oleracea HOM05D003848 ORTHO05D004616 6.1e-09 66.6 51 62.7
BcaC01g01557 Brassica carinata HOM05D003848 ORTHO05D004616 8.8e-08 62.8 51 58.8
BraA09t40883Z Brassica rapa HOM05D003848 ORTHO05D004616 8.8e-08 62.8 88 48.9


User provided reference genes

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