Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 4.6e-115 417.9 216 100.0
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 1.4e-55 220.3 224 58.0
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 1.6e-54 216.9 225 59.6
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 1.3e-53 213.8 222 57.2
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 2.5e-52 209.5 222 59.0
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 1.4e-50 203.8 227 55.1
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 6.8e-50 201.4 225 56.0
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 1.9e-47 193.4 223 53.4
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 4.6e-46 188.7 229 52.8
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 4.6e-46 188.7 229 52.4
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 7.8e-46 188.0 226 54.0
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 3.9e-45 185.7 222 53.2
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 6.6e-45 184.9 232 53.4
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 8.6e-45 184.5 222 51.4
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 9.6e-44 181.0 229 50.2
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 3.6e-43 179.1 224 54.0
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 1.4e-42 177.2 232 50.0
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 1.8e-42 176.8 236 49.6
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 4.0e-42 175.6 232 49.1
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 1.2e-41 174.1 232 50.4
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 1.2e-41 174.1 232 50.4
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 1.5e-41 173.7 226 49.1
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 2.6e-41 172.9 221 52.9
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 3.4e-41 172.6 226 48.7
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 5.8e-41 171.8 226 49.6
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 7.6e-41 171.4 237 51.1
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 7.6e-41 171.4 245 46.5
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 1.3e-40 170.6 224 50.4
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 1.7e-40 170.2 224 50.0
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 1.7e-40 170.2 237 48.5
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 1.7e-40 170.2 230 47.8
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 2.9e-40 169.5 230 46.5
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 6.4e-40 168.3 235 48.1
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.4e-39 167.2 224 51.8
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 1.9e-39 166.8 231 50.2
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.9e-39 166.8 228 50.9
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 2.4e-39 166.4 230 48.7
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 3.2e-39 166.0 239 46.0
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 4.2e-39 165.6 229 47.6
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 5.4e-39 165.2 231 47.2
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 9.3e-39 164.5 226 47.8
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 9.3e-39 164.5 220 47.3
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 9.3e-39 164.5 220 47.3
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 9.3e-39 164.5 229 47.2
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 1.2e-38 164.1 224 48.2
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 1.6e-38 163.7 222 50.5
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.6e-38 163.7 228 50.4
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 2.1e-38 163.3 237 48.5
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.1e-38 163.3 228 50.4
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 4.6e-38 162.2 229 46.7
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 6.0e-38 161.8 237 50.6
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 1.0e-37 161.0 225 50.7
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 2.3e-37 159.8 223 49.8
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 3.9e-37 159.1 226 46.0
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 3.9e-37 159.1 225 47.6
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 8.7e-37 157.9 230 47.4
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 1.1e-36 157.5 231 48.9
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 1.1e-36 157.5 231 49.8
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 1.1e-36 157.5 237 46.4
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 1.5e-36 157.1 226 46.5
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 4.3e-36 155.6 220 46.8
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 5.6e-36 155.2 231 48.1
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 7.3e-36 154.8 230 47.8
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 9.6e-36 154.5 226 47.8
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 9.6e-36 154.5 225 44.4
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 9.6e-36 154.5 240 45.8
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 9.6e-36 154.5 231 48.5
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 1.3e-35 154.1 227 47.6
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 2.1e-35 153.3 166 57.8
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.6e-35 152.5 230 48.3
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 3.6e-35 152.5 224 46.4
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 4.8e-35 152.1 223 49.8
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 6.2e-35 151.8 237 47.3
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 6.2e-35 151.8 231 43.7
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 8.1e-35 151.4 226 46.5
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 8.1e-35 151.4 221 45.7
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.1e-34 151.0 226 46.9
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 2.4e-34 149.8 233 46.8
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 2.4e-34 149.8 227 46.7
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 4.0e-34 149.1 221 44.8
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 5.3e-34 148.7 228 45.6
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 6.9e-34 148.3 232 47.0
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 9.0e-34 147.9 230 43.5
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.5e-33 147.1 218 42.7
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 2.0e-33 146.7 216 47.7
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 2.0e-33 146.7 219 45.7
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 5.8e-33 145.2 226 46.5
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 3.8e-32 142.5 214 46.7
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 3.8e-32 142.5 185 50.3
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 6.4e-32 141.7 158 56.3
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 1.4e-31 140.6 226 46.9
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 1.9e-31 140.2 224 45.5
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 3.2e-31 139.4 231 43.3
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 5.4e-31 138.7 226 43.4
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 5.4e-31 138.7 260 40.0
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 7.1e-31 138.3 232 44.4
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 9.3e-31 137.9 228 45.2
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 2.1e-30 136.7 192 47.4
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.1e-30 136.7 226 45.6
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 3.5e-30 136.0 230 43.9
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 3.5e-30 136.0 227 45.8
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 6.0e-30 135.2 236 44.9
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.0e-29 134.4 222 44.6
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 1.8e-29 133.7 222 42.3
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 3.0e-29 132.9 224 44.6
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 3.0e-29 132.9 226 43.8
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.9e-29 132.5 226 44.2
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 3.9e-29 132.5 180 49.4
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 5.1e-29 132.1 182 50.0
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 6.7e-29 131.7 219 42.5
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 8.7e-29 131.3 226 44.2
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 8.7e-29 131.3 220 42.3
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 8.7e-29 131.3 185 47.0
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 1.1e-28 131.0 234 44.4
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 3.3e-28 129.4 225 43.1
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 7.4e-28 128.3 216 44.9
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 1.6e-27 127.1 221 42.5
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 2.8e-27 126.3 223 42.2
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 3.6e-27 125.9 228 43.9
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 3.1e-26 122.9 150 50.7
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 9.0e-26 121.3 221 42.1
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 1.5e-25 120.6 221 41.6
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 2.6e-25 119.8 236 41.5
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 3.4e-25 119.4 223 42.6
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 5.8e-25 118.6 224 40.2
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 1.3e-24 117.5 222 41.4
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 1.3e-24 117.5 230 39.6
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 1.7e-24 117.1 224 42.4
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 1.7e-24 117.1 238 40.3
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 1.7e-24 117.1 241 39.4
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 2.9e-24 116.3 221 42.1
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 3.2e-23 112.8 220 40.9
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 5.5e-23 112.1 216 40.7
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 5.5e-23 112.1 216 40.7
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 5.5e-23 112.1 222 41.9
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 7.1e-23 111.7 104 59.6
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 2.1e-22 110.2 214 40.2
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 1.0e-21 107.8 213 39.9
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 2.3e-21 106.7 222 40.1
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 3.9e-21 105.9 179 40.2
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 2.5e-20 103.2 295 31.5
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 3.7e-19 99.4 193 40.9
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 6.2e-19 98.6 189 39.7
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 3.1e-18 96.3 216 38.4
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 9.0e-18 94.7 196 39.3
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 2.0e-17 93.6 214 37.4
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 2.0e-17 93.6 214 36.4
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 2.0e-17 93.6 148 45.9
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 2.2e-16 90.1 148 45.9
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 4.9e-16 89.0 230 36.1
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 1.2e-14 84.3 99 50.5
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 1.2e-14 84.3 173 37.0
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 1.3e-13 80.9 227 36.6
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 7.4e-12 75.1 167 37.7
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 3.7e-11 72.8 111 45.9
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 2.4e-10 70.1 172 35.5
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 1.5e-09 67.4 176 35.8
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 4.5e-09 65.9 130 41.5
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 5.9e-09 65.5 96 47.9
SMO134G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 5.9e-09 65.5 99 40.4
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 1.0e-08 64.7 182 35.7
Mapoly0128s0012 Marchantia polymorpha HOM05D004016 ORTHO05D004732 1.7e-08 63.9 106 48.1
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 1.9e-07 60.5 44 63.6
SEGI_04941 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 2.1e-06 57.0 162 34.0
GSVIVG01001172001 Vitis vinifera HOM05D004016 ORTHO05D004732 2.1e-06 57.0 92 38.0
AagrBONN_evm.TU.Sc2ySwM_362.2843 Anthoceros agrestis HOM05D004016 ORTHO05D004732 2.7e-06 56.6 34 82.4


User provided reference genes

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