Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027974.1 Olea europaea HOM05D007506 ORTHO05D008409 1.4e-25 119.4 86 100.0
Sopen11g002680 Solanum pennellii HOM05D007506 ORTHO05D008409 2.2e-15 85.5 87 79.3
Solyc11g006750.1 Solanum lycopersicum HOM05D007506 ORTHO05D008409 4.8e-15 84.3 87 80.5
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 3.1e-14 81.6 58 77.6
Oeu024806.1 Olea europaea HOM05D007506 ORTHO05D008409 2.7e-13 78.6 56 80.4
Nitab4.5_0005214g0030 Nicotiana tabacum HOM05D007506 ORTHO05D008409 1.0e-12 76.6 90 76.7
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 1.3e-12 76.3 58 74.1
Nitab4.5_0010633g0010 Nicotiana tabacum HOM05D007506 ORTHO05D008409 1.3e-12 76.3 90 76.7
Peaxi162Scf00519g00621 Petunia axillaris HOM05D007506 ORTHO05D008409 1.3e-12 76.3 87 78.2
PGSC0003DMG400023979 Solanum tuberosum HOM05D007506 ORTHO05D008409 3.8e-12 74.7 57 75.4
Peaxi162Scf00125g00216 Petunia axillaris HOM05D007506 ORTHO05D008409 1.2e-10 69.7 58 67.2
CAN.G1373.1 Capsicum annuum HOM05D007506 ORTHO05D008409 1.6e-10 69.3 58 70.7
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 2.1e-10 68.9 59 72.9
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 6.1e-10 67.4 58 70.7
SalBow6G2037 Salvia bowleyana HOM05D007506 ORTHO05D008409 6.1e-10 67.4 56 71.4
PGSC0003DMG400023393 Solanum tuberosum HOM05D007506 ORTHO05D008409 6.1e-10 67.4 59 67.8
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 4.0e-09 64.7 56 71.4
Dinv02210 Davidia involucrata HOM05D007506 ORTHO05D008409 1.2e-08 63.2 87 71.3
Hma1.2p1_0756F.1_g213210 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 1.2e-08 63.2 58 67.2
Hma1.2p1_0756F.1_g213215 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 1.2e-08 63.2 58 67.2
Hma1.2p1_1491F.1_g286710 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 1.2e-08 63.2 58 67.2
Solyc05g055250.2 Solanum lycopersicum HOM05D007506 ORTHO05D008409 1.5e-08 62.8 59 62.7
Glyma.20G110900 Glycine max HOM05D007506 ORTHO05D008409 2.6e-08 62.0 58 65.5
Nitab4.5_0015562g0010 Nicotiana tabacum HOM05D007506 ORTHO05D008409 2.6e-08 62.0 52 69.2
Glyma.10G277900 Glycine max HOM05D007506 ORTHO05D008409 3.4e-08 61.6 57 64.9
VMungo0720G0153 Vigna mungo HOM05D007506 ORTHO05D008409 4.4e-08 61.2 57 63.2
Sopen05g033690 Solanum pennellii HOM05D007506 ORTHO05D008409 9.8e-08 60.1 57 63.2
Phvul.007G023500 Phaseolus vulgaris HOM05D007506 ORTHO05D008409 1.7e-07 59.3 57 61.4
SalBow3G3829 Salvia bowleyana HOM05D007506 ORTHO05D008409 1.7e-07 59.3 58 62.1
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 1.7e-07 59.3 60 65.0
unitig_899.g14468 Utricularia gibba HOM05D007506 ORTHO05D008409 2.2e-07 58.9 41 82.9
HanXRQChr12g0368271 Helianthus annuus HOM05D021830 ORTHO05D008409 2.8e-07 58.5 57 57.9
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 2.8e-07 58.5 58 62.1
CAN.G1417.6 Capsicum annuum HOM05D007506 ORTHO05D008409 6.3e-07 57.4 52 67.3
AUR62042085 Chenopodium quinoa HOM05D007506 ORTHO05D008409 8.3e-07 57.0 60 63.3
ClCG08G008330 Citrullus lanatus HOM05D007506 ORTHO05D008409 1.1e-06 56.6 57 63.2
EL10Ac4g08692 Beta vulgaris HOM05D007506 ORTHO05D008409 1.4e-06 56.2 62 59.7
Lj5g0016646 Lotus japonicus HOM05D007506 ORTHO05D008409 1.4e-06 56.2 57 57.9
Medtr1g111840 Medicago truncatula HOM05D007506 ORTHO05D008409 1.4e-06 56.2 57 57.9
MELO3C019903.2 Cucumis melo HOM05D007506 ORTHO05D008409 1.8e-06 55.8 57 63.2
CsaV3_6G004310 Cucumis sativus L. HOM05D007506 ORTHO05D008409 1.8e-06 55.8 57 61.4
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 1.8e-06 55.8 57 56.1
QL04p046828 Quercus lobata HOM05D007506 ORTHO05D008409 1.8e-06 55.8 57 56.1
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 3.1e-06 55.1 58 60.3
Lsat_1_v5_gn_8_24340 Lactuca sativa HOM05D021830 ORTHO05D025293 4.1e-06 54.7 56 60.7
Ca_25653_v3 Cicer arietinum L. HOM05D007506 ORTHO05D008409 5.4e-06 54.3 57 56.1
Psat6g238400 Pisum sativum HOM05D007506 ORTHO05D008409 7.0e-06 53.9 57 54.4
SGA_v2.0_scaffold62G21316 Striga asiatica HOM05D007506 ORTHO05D008409 7.0e-06 53.9 34 85.3
Dinv02209 Davidia involucrata HOM05D007506 ORTHO05D008409 9.2e-06 53.5 50 66.0
Dinv07589 Davidia involucrata HOM05D007506 ORTHO05D008409 9.2e-06 53.5 50 66.0
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 9.2e-06 53.5 59 61.0


User provided reference genes

Program Settings