Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 7.2e-253 876.7 428 100.0
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 2.4e-195 685.6 433 76.0
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 9.9e-194 680.2 426 75.6
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 4.9e-193 677.9 430 75.3
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 4.9e-193 677.9 427 74.9
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.1e-191 672.5 427 73.8
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 2.7e-191 672.2 425 73.9
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 2.7e-191 672.2 420 75.2
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 4.6e-191 671.4 430 74.4
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 6.0e-191 671.0 427 73.8
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 6.0e-191 671.0 427 73.8
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 6.0e-191 671.0 428 74.1
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 1.0e-190 670.2 433 73.4
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 1.0e-190 670.2 430 74.0
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 1.0e-190 670.2 431 73.8
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 1.3e-190 669.8 430 74.4
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 1.9e-189 666.0 433 73.4
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 5.6e-189 664.5 430 73.7
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 7.4e-189 664.1 427 75.2
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 9.6e-189 663.7 428 74.5
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 1.3e-188 663.3 418 74.9
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 1.3e-188 663.3 430 74.7
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 2.1e-188 662.5 432 72.9
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 4.8e-188 661.4 428 72.7
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 6.2e-188 661.0 433 73.9
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 1.4e-187 659.8 429 73.9
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 1.4e-187 659.8 412 76.5
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 1.4e-187 659.8 429 73.9
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 1.8e-187 659.4 418 73.9
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 5.3e-187 657.9 424 76.2
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 9.0e-187 657.1 432 72.9
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 4.5e-186 654.8 431 73.5
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 5.8e-186 654.4 420 73.8
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 2.2e-185 652.5 431 71.5
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 2.9e-185 652.1 430 71.9
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 3.2e-184 648.7 431 73.3
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 3.2e-184 648.7 430 71.4
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 5.5e-184 647.9 430 71.2
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 5.5e-184 647.9 443 72.2
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 1.6e-183 646.4 430 71.2
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 3.5e-183 645.2 430 70.2
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 4.6e-183 644.8 433 71.4
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 1.3e-182 643.3 430 70.5
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 5.1e-182 641.3 415 70.6
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 5.1e-182 641.3 414 71.5
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 6.7e-182 641.0 430 69.8
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 8.7e-182 640.6 417 71.2
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 1.1e-181 640.2 414 71.0
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 1.1e-181 640.2 428 72.2
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 2.5e-181 639.0 430 69.8
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 7.4e-181 637.5 444 69.4
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.6e-180 636.3 429 69.7
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 2.2e-180 636.0 419 70.2
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 2.2e-180 636.0 423 71.2
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 2.8e-180 635.6 418 70.6
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 6.3e-180 634.4 430 69.8
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 6.3e-180 634.4 419 71.1
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 6.3e-180 634.4 430 69.5
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 1.1e-179 633.6 453 68.9
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 2.4e-179 632.5 417 69.5
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 3.1e-179 632.1 430 70.9
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 4.1e-179 631.7 425 69.2
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 6.9e-179 630.9 430 70.5
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 1.2e-178 630.2 414 70.0
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 4.5e-178 628.2 414 70.5
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 4.5e-178 628.2 414 70.5
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 5.9e-178 627.9 431 68.7
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 5.9e-178 627.9 419 69.2
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 1.3e-177 626.7 431 68.4
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 2.2e-177 625.9 430 69.1
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.9e-177 625.5 419 70.6
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 5.0e-177 624.8 431 68.4
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 5.0e-177 624.8 419 70.6
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 1.1e-176 623.6 428 70.6
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 2.5e-176 622.5 428 69.9
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 9.4e-176 620.5 431 71.0
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 3.6e-175 618.6 436 70.2
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 6.1e-175 617.8 419 68.0
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 6.1e-175 617.8 411 69.3
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 5.1e-174 614.8 427 68.4
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 1.1e-173 613.6 429 66.9
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.9e-173 612.8 427 67.9
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.9e-173 612.8 427 67.9
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 5.7e-173 611.3 440 65.9
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 7.4e-173 610.9 421 69.4
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 2.2e-172 609.4 432 70.1
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 2.4e-171 605.9 439 67.4
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 6.9e-171 604.4 432 67.4
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 1.2e-170 603.6 413 68.5
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 1.5e-170 603.2 438 66.4
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 1.0e-169 600.5 413 69.5
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 1.7e-169 599.7 414 69.8
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 1.4e-168 596.7 434 66.6
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 2.7e-167 592.4 412 68.9
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 3.9e-166 588.6 409 68.7
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 8.8e-166 587.4 421 63.9
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 9.7e-165 583.9 421 63.4
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 2.2e-164 582.8 435 63.7
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.8e-164 582.4 433 64.4
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 3.7e-164 582.0 420 67.4
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.8e-163 579.7 420 66.7
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.4e-163 579.3 417 68.8
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 1.3e-161 573.5 414 66.2
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.2e-161 572.8 435 62.8
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 2.0e-157 559.7 430 64.2
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 5.9e-154 548.1 412 62.9
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 2.1e-151 539.7 412 62.1
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.0e-150 537.3 436 59.9
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 1.4e-150 537.0 429 57.6
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 1.4e-150 537.0 424 59.4
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 1.2e-149 533.9 430 57.7
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 1.2e-149 533.9 435 61.1
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 9.7e-149 530.8 356 70.8
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 1.7e-148 530.0 429 56.6
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 6.3e-148 528.1 417 59.7
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.0e-142 510.8 449 55.0
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 3.8e-137 492.3 415 56.4
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 8.0e-135 484.6 393 57.5
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 2.3e-126 456.4 406 57.1
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 1.5e-125 453.8 431 52.4
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 5.8e-125 451.8 309 69.6
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 1.9e-115 420.2 296 66.2
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 3.9e-113 412.5 429 52.9
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 5.1e-113 412.1 411 50.9
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 1.5e-112 410.6 429 52.9
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 1.4e-110 404.1 413 48.4
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 6.8e-110 401.7 418 46.9
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.3e-105 387.5 266 66.2
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.2e-103 380.9 345 53.3
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 1.3e-92 344.4 410 42.9
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 5.1e-89 332.4 253 65.6
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 7.3e-88 328.6 227 67.4
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 3.4e-85 319.7 239 64.9
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.6e-82 310.8 291 52.6
Lj3C845T9 Lonicera japonica HOM05D004203 ORTHO05D004830 7.4e-56 222.2 156 67.9
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 2.6e-53 213.8 161 62.7
SEGI_16211 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.5e-51 207.2 310 38.7
Sc08g0004150 Simmondsia chinensis HOM05D004203 ORTHO05D004830 7.9e-50 202.2 141 63.8
Sc08g0004170 Simmondsia chinensis HOM05D004203 ORTHO05D004830 2.6e-45 187.2 132 62.1
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 3.5e-45 186.8 144 61.1
Solyc11g006360.1 Solanum lycopersicum HOM05D004203 ORTHO05D004830 8.5e-44 182.2 115 72.2
FAN12G3670 Fragaria x ananassa HOM05D004203 ORTHO05D004830 5.7e-40 169.5 159 59.1
Atru.chr11.61 Acer truncatum HOM05D004203 ORTHO05D004830 1.4e-38 164.9 127 62.2
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.4e-38 164.9 213 45.5
BcaB06g27490 Brassica carinata HOM05D004203 ORTHO05D004830 6.5e-36 156.0 158 51.3
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 1.9e-35 154.5 406 27.3
BcaC07g39871 Brassica carinata HOM05D004203 ORTHO05D004830 5.7e-24 116.3 79 67.1
BcaB06g26576 Brassica carinata HOM05D004203 ORTHO05D004830 2.4e-22 110.9 79 65.8
BcaB06g27488 Brassica carinata HOM05D004203 ORTHO05D004830 4.1e-22 110.2 102 52.0
Sc08g0004180 Simmondsia chinensis HOM05D004203 ORTHO05D004830 4.5e-21 106.7 68 72.1
BcaB06g27492 Brassica carinata HOM05D004203 ORTHO05D004830 1.7e-20 104.8 92 55.4
BcaB08g37040 Brassica carinata HOM05D004203 ORTHO05D004830 4.2e-19 100.1 71 66.2
Sc08g0004140 Simmondsia chinensis HOM05D004203 ORTHO05D004830 3.6e-18 97.1 86 52.3
Os03g0251425 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 3.7e-15 87.0 89 44.9
GSVIVG01034364001 Vitis vinifera HOM05D004203 ORTHO05D004830 2.4e-14 84.3 60 60.0
BcaB06g27495 Brassica carinata HOM05D004203 ORTHO05D004830 3.2e-14 84.0 60 66.7
SEGI_08354 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 4.1e-14 83.6 146 32.9
BcaB06g27494 Brassica carinata HOM05D004203 ORTHO05D004830 2.7e-13 80.9 67 59.7
COL.COLO4_33125 Corchorus olitorius HOM05D004203 ORTHO05D004830 2.5e-11 74.3 57 63.2
MCO08G255 Micromonas commoda HOM05D004203 ORTHO05D004830 9.5e-11 72.4 106 38.7
BcaC07g38231 Brassica carinata HOM05D004203 ORTHO05D004830 2.8e-10 70.9 58 60.3
BcaB06g26577 Brassica carinata HOM05D004203 ORTHO05D004830 1.0e-09 68.9 55 60.0
BcaB05g24942 Brassica carinata HOM05D004203 ORTHO05D004830 3.7e-07 60.5 39 59.0
A05p19690 Brassica napus HOM05D004203 ORTHO05D004830 4.9e-07 60.1 51 56.9
Pp3c14_4390 Physcomitrium patens HOM05D004203 ORTHO05D004830 8.3e-07 59.3 72 36.1


User provided reference genes

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