Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027930.1 Olea europaea HOM05D006667 ORTHO05D008387 2.2e-102 376.7 407 100.0
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 4.4e-74 282.7 407 73.2
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 5.0e-70 269.2 401 72.1
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 2.5e-69 266.9 403 71.2
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 3.6e-68 263.1 406 66.7
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 3.6e-68 263.1 403 73.2
SalBow2G2931 Salvia bowleyana HOM05D006667 ORTHO05D008387 1.4e-67 261.2 400 73.0
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 1.4e-67 261.2 401 69.1
CSS0023228 Camellia sinensis var. sinensis HOM05D006667 ORTHO05D008387 1.5e-66 257.7 401 74.3
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 2.0e-66 257.3 401 67.1
MSTRG.8092 Avicennia marina HOM05D006667 ORTHO05D008387 1.3e-65 254.6 407 73.5
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 1.7e-65 254.2 401 72.3
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 2.9e-65 253.4 403 69.0
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 2.9e-65 253.4 403 69.0
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 6.4e-65 252.3 401 72.3
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 3.2e-64 250.0 401 66.8
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 9.2e-64 248.4 403 71.0
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 2.7e-63 246.9 401 74.3
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 7.8e-63 245.4 401 74.1
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 1.0e-62 245.0 408 65.7
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 1.0e-62 245.0 408 65.7
ECA246G5028 Erigeron canadensis HOM05D002605 ORTHO05D002842 5.0e-62 242.7 395 81.5
Hma1.2p1_0044F.1_g026320 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 4.3e-61 239.6 401 71.8
Lsat_1_v5_gn_3_34481 Lactuca sativa HOM05D006667 ORTHO05D008387 5.6e-61 239.2 399 79.9
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 3.6e-60 236.5 401 68.3
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 4.7e-60 236.1 405 64.4
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 4.7e-60 236.1 401 73.3
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 6.2e-60 235.7 402 69.9
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 1.4e-59 234.6 406 68.7
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 2.3e-59 233.8 404 67.8
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 2.3e-59 233.8 400 65.0
HanXRQChr17g0541041 Helianthus annuus HOM05D006667 ORTHO05D008387 3.1e-59 233.4 401 79.6
Cpa.g.sc60.94 Carica papaya HOM05D006667 ORTHO05D008387 4.0e-59 233.0 395 71.4
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 1.2e-58 231.5 401 68.8
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 7.5e-58 228.8 402 68.2
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 9.8e-58 228.4 402 65.4
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 3.7e-57 226.5 401 65.3
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 1.9e-56 224.2 406 71.2
Sp2g23820 Schrenkiella parvula HOM05D006667 ORTHO05D008387 1.9e-56 224.2 401 69.3
SGA_v2.0_scaffold80G25957 Striga asiatica HOM05D006667 ORTHO05D008387 1.9e-56 224.2 412 68.9
Aa31LG11G2790 Aethionema arabicum HOM05D006667 ORTHO05D008387 3.2e-56 223.4 401 67.6
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 3.2e-56 223.4 395 64.3
TPR.G4129 Trifolium pratense HOM05D006667 ORTHO05D008387 3.2e-56 223.4 405 68.9
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 9.2e-56 221.9 401 65.1
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 1.6e-55 221.1 401 63.3
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 2.7e-55 220.3 401 67.3
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 2.7e-55 220.3 395 68.6
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 6.0e-55 219.2 401 63.6
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 6.0e-55 219.2 401 66.8
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 7.8e-55 218.8 401 63.6
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 1.0e-54 218.4 398 65.6
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 1.0e-54 218.4 401 64.8
TWI53G1716 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 1.7e-54 217.6 399 77.7
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 2.3e-54 217.2 401 60.8
BolC7t44948H Brassica oleracea HOM05D006667 ORTHO05D008387 2.3e-54 217.2 401 70.3
AT5G23340 Arabidopsis thaliana HOM05D006667 ORTHO05D008387 3.0e-54 216.9 401 70.3
Sc10g0006700 Simmondsia chinensis HOM05D006667 ORTHO05D008387 3.0e-54 216.9 402 63.7
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 3.9e-54 216.5 401 63.1
A06p34280 Brassica napus HOM05D006667 ORTHO05D008387 5.1e-54 216.1 401 70.3
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 1.1e-53 214.9 401 67.1
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 1.5e-53 214.5 406 65.8
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 2.5e-53 213.8 401 66.8
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 9.5e-53 211.8 400 62.0
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 1.6e-52 211.1 400 65.8
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 2.8e-52 210.3 405 61.5
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 4.7e-52 209.5 400 62.0
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 8.1e-52 208.8 401 69.8
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 8.1e-52 208.8 401 62.8
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 1.1e-51 208.4 400 65.2
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 6.8e-51 205.7 400 64.5
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 1.2e-50 204.9 400 66.0
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 4.4e-50 203.0 401 62.6
Ciclev10033734m.g Citrus clementina HOM05D006667 ORTHO05D008387 4.4e-50 203.0 404 61.4
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 5.8e-50 202.6 462 49.1
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 7.5e-50 202.2 401 67.6
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 1.9e-48 197.6 415 61.7
Atru.chr11.1242 Acer truncatum HOM05D006667 ORTHO05D008387 4.1e-48 196.4 401 65.3
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 7.1e-48 195.7 401 61.1
PGR142G2507 Punica granatum HOM05D006667 ORTHO05D008387 7.1e-48 195.7 400 64.5
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 2.7e-47 193.7 401 61.3
Ca_11261_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 3.0e-46 190.3 403 65.8
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 3.0e-46 190.3 403 64.5
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 5.1e-46 189.5 389 62.5
HanXRQChr06g0171711 Helianthus annuus HOM05D006667 ORTHO05D008387 6.6e-46 189.1 390 76.2
Eucgr.G02589 Eucalyptus grandis HOM05D006667 ORTHO05D008387 1.5e-45 188.0 402 68.4
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 2.5e-45 187.2 402 61.4
CDE04G2906 Ceratophyllum demersum HOM05D006667 ORTHO05D008387 3.3e-45 186.8 394 67.3
vmacro15997 Vaccinium macrocarpon HOM05D006667 ORTHO05D008387 1.2e-44 184.9 531 47.1
Nn3g18579 Nelumbo nucifera HOM05D006667 ORTHO05D008387 2.8e-44 183.7 399 77.7
Hma1.2p1_0044F.1_g026310 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 3.6e-44 183.3 433 46.2
Ah.03g147880 Amaranthus hybridus HOM05D006667 ORTHO05D008387 1.4e-43 181.4 426 54.2
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 6.8e-43 179.1 407 59.5
Zm00001eb185570 Zea mays HOM05D006667 ORTHO05D008387 2.6e-42 177.2 402 54.5
PSO017G3027 Papaver somniferum HOM05D006667 ORTHO05D008387 6.4e-41 172.6 402 65.4
PSO170G5099 Papaver somniferum HOM05D006667 ORTHO05D008387 2.4e-40 170.6 402 73.9
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 2.1e-39 167.5 401 67.1
Haze_11790 Corylus avellana HOM05D006667 ORTHO05D008387 9.6e-37 158.7 410 62.2
arahy.Tifrunner.gnm1.ann1.6XP1A8 Arachis hypogaea HOM05D006667 ORTHO05D008387 1.1e-35 155.2 105 69.5
arahy.Tifrunner.gnm1.ann1.RI7T4X Arachis hypogaea HOM05D006667 ORTHO05D008387 1.1e-35 155.2 105 69.5
AUR62017733 Chenopodium quinoa HOM05D006667 ORTHO05D008387 1.3e-33 148.3 413 53.3
ATR0618G066 Amborella trichopoda HOM05D006667 ORTHO05D008387 1.1e-32 145.2 106 65.1
arahy.Tifrunner.gnm1.ann1.ALJ85P Arachis hypogaea HOM05D006667 ORTHO05D008387 2.7e-31 140.6 90 75.6
SEGI_01489 Sequoiadendron giganteum HOM05D006667 ORTHO05D008387 3.0e-30 137.1 106 62.3
HPP92_025485 Vanilla planifolia HOM05D006667 ORTHO05D008387 5.1e-30 136.3 106 64.2
arahy.Tifrunner.gnm1.ann1.L6WSTP Arachis hypogaea HOM05D006667 ORTHO05D008387 1.3e-28 131.7 89 71.9
SMO116G0353 Selaginella moellendorffii HOM05D006667 ORTHO05D008387 6.9e-27 125.9 107 57.9
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 1.7e-25 121.3 183 57.4
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 7.4e-21 105.9 396 38.4
Dinv17648 Davidia involucrata HOM05D006667 ORTHO05D008387 5.3e-19 99.8 66 69.7
Os02g0636400 Oryza sativa ssp. japonica HOM05D006667 ORTHO05D008387 1.5e-18 98.2 180 41.1
Ca_11262_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 4.3e-13 80.1 181 43.6
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 1.2e-10 72.0 82 45.1
Medtr7g010500 Medicago truncatula HOM05D006667 ORTHO05D008387 5.0e-09 66.6 52 63.5
Pp3c10_8230 Physcomitrium patens HOM05D006667 ORTHO05D008387 6.1e-07 59.7 59 52.5
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 8.7e-06 55.8 136 29.4


User provided reference genes

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