Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027918.1 Olea europaea HOM05D003379 ORTHO05D003862 3.8e-199 698.0 356 100.0
MSTRG.2062 Avicennia marina HOM05D003379 ORTHO05D003862 2.0e-78 297.0 440 45.5
Dinv25618 Davidia involucrata HOM05D003379 ORTHO05D003862 4.1e-68 262.7 456 41.4
Migut.E00693 Erythranthe guttata HOM05D003379 ORTHO05D003862 9.5e-65 251.5 441 41.0
Manes.11G076800 Manihot esculenta HOM05D003379 ORTHO05D003862 9.5e-65 251.5 445 39.1
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 2.0e-62 243.8 435 39.5
SGA_v2.0_scaffold306G48013 Striga asiatica HOM05D003379 ORTHO05D003862 7.5e-62 241.9 446 38.3
Actinidia36245 Actinidia chinensis HOM05D003379 ORTHO05D003862 4.9e-61 239.2 444 40.1
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 4.9e-61 239.2 434 40.6
Atru.chr6.2693 Acer truncatum HOM05D003379 ORTHO05D003862 6.0e-59 232.3 411 39.4
Lsat_1_v5_gn_0_41321 Lactuca sativa HOM05D003379 ORTHO05D003862 2.3e-58 230.3 376 43.9
Ciclev10015333m.g Citrus clementina HOM05D003379 ORTHO05D003862 8.6e-58 228.4 430 38.6
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 1.5e-57 227.6 433 39.3
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 1.5e-57 227.6 436 38.8
COL.COLO4_13374 Corchorus olitorius HOM05D003379 ORTHO05D003862 4.3e-57 226.1 447 38.3
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 9.5e-57 224.9 434 37.3
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 2.8e-56 223.4 418 38.5
Cpa.g.sc70.68 Carica papaya HOM05D003379 ORTHO05D003862 1.5e-54 217.6 451 37.5
Sopen02g036510 Solanum pennellii HOM05D003379 ORTHO05D003862 1.5e-54 217.6 380 42.1
QL02p069539 Quercus lobata HOM05D003379 ORTHO05D003862 2.0e-54 217.2 443 37.0
Sed0021165 Sechium edule HOM05D003379 ORTHO05D003862 2.6e-54 216.9 442 37.1
Lj7A617T72 Lonicera japonica HOM05D003379 ORTHO05D003862 4.4e-54 216.1 438 38.1
Rhsim08G0039200 Rhododendron simsii HOM05D003379 ORTHO05D003862 4.4e-54 216.1 459 36.4
CAN.G1061.1 Capsicum annuum HOM05D003379 ORTHO05D003862 9.8e-54 214.9 370 43.2
vmacro18379 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 1.3e-53 214.5 459 37.7
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 1.7e-53 214.2 439 36.0
Nitab4.5_0001409g0240 Nicotiana tabacum HOM05D000225 ORTHO05D001595 4.9e-53 212.6 371 41.2
SalBow6G5409 Salvia bowleyana HOM05D003379 ORTHO05D003862 6.4e-53 212.2 311 39.5
Solyc02g091940.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 6.4e-53 212.2 380 41.8
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 1.1e-52 211.5 441 37.0
MD17G1006900 Malus domestica HOM05D003379 ORTHO05D003862 2.4e-52 210.3 434 35.3
PGSC0003DMG400021424 Solanum tuberosum HOM05D003379 ORTHO05D003862 3.2e-52 209.9 368 42.1
Cfa007165 Carpinus fangiana HOM05D003379 ORTHO05D003862 4.1e-52 209.5 443 36.8
TWI32G0366 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 7.1e-52 208.8 423 36.6
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 1.2e-51 208.0 441 36.1
Haze_14949 Corylus avellana HOM05D003379 ORTHO05D003862 1.6e-51 207.6 448 36.2
Nitab4.5_0007209g0030 Nicotiana tabacum HOM05D000225 ORTHO05D001595 1.6e-51 207.6 352 41.8
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 2.7e-51 206.8 435 36.1
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 4.6e-51 206.1 374 40.1
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 6.0e-51 205.7 447 36.2
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 1.3e-50 204.5 434 36.6
MD09G1002700 Malus domestica HOM05D003379 ORTHO05D003862 1.7e-50 204.1 431 35.7
Sabra02G0181500 Salix brachista HOM05D003379 ORTHO05D003862 1.7e-50 204.1 434 36.9
Sc03g0005220 Simmondsia chinensis HOM05D003379 ORTHO05D003862 8.6e-50 201.8 409 37.2
Prupe.3G313500 Prunus persica HOM05D003379 ORTHO05D003862 1.9e-49 200.7 437 35.5
Thecc.04G047800 Theobroma cacao HOM05D003379 ORTHO05D003862 3.3e-49 199.9 450 36.7
Lalb_Chr14g0364121 Lupinus albus HOM05D003379 ORTHO05D003862 4.3e-49 199.5 428 36.0
VMungo1383G3656 Vigna mungo HOM05D003379 ORTHO05D003862 9.5e-49 198.4 420 36.7
Gohir.A07G232700 Gossypium hirsutum HOM05D003379 ORTHO05D003862 3.6e-48 196.4 446 35.7
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 6.2e-48 195.7 424 35.4
Gohir.D07G239900 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.3e-47 193.7 450 36.7
Gorai.001G276100 Gossypium raimondii HOM05D003379 ORTHO05D003862 6.8e-47 192.2 448 36.6
Phvul.001G084300 Phaseolus vulgaris HOM05D003379 ORTHO05D003862 4.4e-46 189.5 427 35.1
FAN09G0861 Fragaria x ananassa HOM05D003379 ORTHO05D003862 6.4e-45 185.7 423 34.0
Eucgr.I02446 Eucalyptus grandis HOM05D003379 ORTHO05D003862 8.4e-45 185.3 459 35.3
FvH4_6g54290 Fragaria vesca HOM05D003379 ORTHO05D003862 2.4e-44 183.7 426 34.5
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 4.1e-44 183.0 496 33.9
Ca_08145_v3 Cicer arietinum L. HOM05D003379 ORTHO05D003862 9.2e-44 181.8 421 34.9
FAN14G1380 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.7e-43 180.3 424 34.0
DCAR_002970 Daucus carota HOM05D003379 ORTHO05D003862 6.0e-43 179.1 423 35.0
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 5.1e-42 176.0 431 33.4
FAN05G5138 Fragaria x ananassa HOM05D003379 ORTHO05D003862 5.1e-42 176.0 423 34.3
Glyma.16G047900 Glycine max HOM05D003379 ORTHO05D003862 2.5e-41 173.7 426 33.3
QL03p049546 Quercus lobata HOM05D003379 ORTHO05D003862 2.5e-41 173.7 429 36.1
Sabra03G0118600 Salix brachista HOM05D003379 ORTHO05D003862 2.5e-41 173.7 447 33.1
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 3.3e-41 173.3 426 35.7
CDE05G0540 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 3.3e-41 173.3 398 34.7
Potri.003G163100 Populus trichocarpa HOM05D003379 ORTHO05D003862 9.6e-41 171.8 447 32.9
HanXRQChr17g0550921 Helianthus annuus HOM05D003379 ORTHO05D003862 1.2e-40 171.4 366 37.2
CDE05G1535 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 2.1e-40 170.6 410 35.4
Glyma.19G103400 Glycine max HOM05D003379 ORTHO05D003862 1.8e-39 167.5 424 33.3
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 3.1e-39 166.8 427 34.2
Medtr7g084070 Medicago truncatula HOM05D003379 ORTHO05D003862 2.6e-38 163.7 422 32.9
Duzib147G0361 Durio zibethinus HOM05D003379 ORTHO05D003862 5.8e-38 162.5 380 35.3
Aa31LG11G15410 Aethionema arabicum HOM05D003379 ORTHO05D003862 7.6e-38 162.2 429 33.3
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 9.9e-38 161.8 451 31.9
Actinidia22119 Actinidia chinensis HOM05D003379 ORTHO05D003862 2.2e-37 160.6 430 31.9
COL.COLO4_21771 Corchorus olitorius HOM05D003379 ORTHO05D003862 2.9e-37 160.2 436 32.8
ECA246G3772 Erigeron canadensis HOM05D003379 ORTHO05D003862 3.8e-37 159.8 413 32.7
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 6.4e-37 159.1 442 31.2
Sp6g30030 Schrenkiella parvula HOM05D003379 ORTHO05D003862 8.4e-37 158.7 421 31.4
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 1.4e-36 157.9 424 31.1
Lj1g0011786 Lotus japonicus HOM05D003379 ORTHO05D003862 1.4e-36 157.9 446 32.5
Atru.chr12.1405 Acer truncatum HOM05D003379 ORTHO05D003862 2.4e-36 157.1 437 32.5
Ciclev10005064m.g Citrus clementina HOM05D003379 ORTHO05D003862 2.4e-36 157.1 432 31.9
PSO478G4908 Papaver somniferum HOM05D003379 ORTHO05D003862 4.2e-36 156.4 437 33.4
A10p24430 Brassica napus HOM05D003379 ORTHO05D003862 5.4e-36 156.0 423 32.9
C09p63160 Brassica napus HOM05D003379 ORTHO05D003862 7.1e-36 155.6 426 32.6
PSO017G0829 Papaver somniferum HOM05D003379 ORTHO05D003862 7.1e-36 155.6 435 33.1
BolC9t59151H Brassica oleracea HOM05D003379 ORTHO05D003862 9.3e-36 155.2 426 32.4
Ah.03g136390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 1.2e-35 154.8 474 31.4
AUR62017428 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.6e-35 154.5 347 33.1
BraA10t44509Z Brassica rapa HOM05D003379 ORTHO05D003862 2.1e-35 154.1 422 32.7
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 2.7e-35 153.7 434 30.4
AL6G24630 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 7.8e-35 152.1 429 31.5
Psat3g093320 Pisum sativum HOM05D003379 ORTHO05D003862 7.8e-35 152.1 430 30.9
EL10Ac6g13403 Beta vulgaris HOM05D003379 ORTHO05D003862 2.3e-34 150.6 475 29.5
Carub.0006s1216 Capsella rubella HOM05D003379 ORTHO05D003862 3.0e-34 150.2 430 32.3
AUR62037825 Chenopodium quinoa HOM05D003379 ORTHO05D003862 3.0e-34 150.2 366 32.8
unitig_22.g5626 Utricularia gibba HOM05D003379 ORTHO05D003862 3.9e-34 149.8 375 34.1
Hund04187 Selenicereus undatus HOM05D003379 ORTHO05D003862 6.6e-34 149.1 470 29.1
AT5G13970 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 1.5e-33 147.9 433 30.9
Thhalv10013725m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 1.5e-33 147.9 421 32.1
Manes.08G101800 Manihot esculenta HOM05D003379 ORTHO05D003862 1.5e-33 147.9 435 31.0
CANSAT64G2275 Cannabis sativa HOM05D003379 ORTHO05D003862 3.3e-33 146.7 418 32.3
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 3.3e-33 146.7 434 31.8
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 1.6e-32 144.4 456 30.9
HanXRQChr12g0384731 Helianthus annuus HOM05D003379 ORTHO05D003862 1.6e-32 144.4 401 31.4
Sc17g0006750 Simmondsia chinensis HOM05D003379 ORTHO05D003862 6.2e-32 142.5 428 30.4
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 1.4e-31 141.4 431 31.1
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 1.4e-31 141.4 433 30.5
Lalb_Chr22g0359971 Lupinus albus HOM05D003379 ORTHO05D003862 1.3e-29 134.8 422 30.6
Ah.09g236390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 2.2e-29 134.0 426 30.3
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.2e-29 134.0 430 30.7
MD13G1129900 Malus domestica HOM05D003379 ORTHO05D003862 3.8e-29 133.3 403 30.3
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 8.4e-29 132.1 439 29.4
EL10Ac8g20553 Beta vulgaris HOM05D003379 ORTHO05D003862 1.4e-28 131.3 417 30.7
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 1.4e-28 131.3 549 27.7
Nitab4.5_0002116g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 3.2e-28 130.2 428 30.8
HPP92_027984 Vanilla planifolia HOM05D003379 ORTHO05D003862 4.2e-28 129.8 352 31.0
TWI36G1473 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 5.4e-28 129.4 433 30.9
THA.LOC104825281 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 7.1e-28 129.0 436 30.3
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 9.3e-28 128.6 416 31.2
arahy.Tifrunner.gnm1.ann1.JRYW6U Arachis hypogaea HOM05D003379 ORTHO05D003862 1.2e-27 128.3 431 29.9
FAN07G0868 Fragaria x ananassa HOM05D003379 ORTHO05D003862 7.9e-27 125.6 429 29.1
AUR62014693 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.0e-26 125.2 415 30.4
Nitab4.5_0005424g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 1.0e-26 125.2 422 29.9
PGSC0003DMG400004243 Solanum tuberosum HOM05D003379 ORTHO05D003862 1.0e-26 125.2 425 28.9
CAN.G7.8 Capsicum annuum HOM05D003379 ORTHO05D003862 1.3e-26 124.8 437 29.1
Rhsim12G0017700 Rhododendron simsii HOM05D003379 ORTHO05D003862 2.3e-26 124.0 439 30.8
arahy.Tifrunner.gnm1.ann1.M1DIX9 Arachis hypogaea HOM05D003379 ORTHO05D003862 5.1e-26 122.9 433 30.3
Sopen04g017060 Solanum pennellii HOM05D003379 ORTHO05D003862 6.7e-26 122.5 423 28.6
GSVIVG01001080001 Vitis vinifera HOM05D003379 ORTHO05D003862 6.7e-26 122.5 402 30.3
Peaxi162Scf00171g00621 Petunia axillaris HOM05D003379 ORTHO05D003862 8.7e-26 122.1 430 27.9
Thecc.02G193300 Theobroma cacao HOM05D003379 ORTHO05D003862 8.7e-26 122.1 433 29.8
FvH4_4g22730 Fragaria vesca HOM05D003379 ORTHO05D003862 1.5e-25 121.3 420 28.1
RcHm_v2.0_Chr4g0428951 Rosa chinensis HOM05D003379 ORTHO05D003862 2.5e-25 120.6 427 27.2
Solyc04g024520.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 2.5e-25 120.6 423 28.4
FAN12G1414 Fragaria x ananassa HOM05D003379 ORTHO05D003862 5.6e-25 119.4 420 27.9
FAN17G1075 Fragaria x ananassa HOM05D003379 ORTHO05D003862 7.4e-25 119.0 428 28.5
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 1.3e-24 118.2 440 27.5
THA.LOC104825464 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 4.0e-23 113.2 432 29.4
BcaC04g19123 Brassica carinata HOM05D003379 ORTHO05D003862 2.6e-22 110.5 426 27.9
CSS0045312 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 3.4e-22 110.2 356 30.1
AUR62012502 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.3e-21 108.2 300 33.7
Gohir.A03G152100 Gossypium hirsutum HOM05D003379 ORTHO05D003862 1.4e-20 104.8 424 28.8
CARHR199420 Cardamine hirsuta HOM05D003379 ORTHO05D003862 1.9e-20 104.4 257 33.1
C09p63750 Brassica napus HOM05D003379 ORTHO05D003862 2.1e-19 100.9 355 29.0
Thhalv10013755m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 2.1e-19 100.9 425 27.8
FAN05G5404 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.7e-19 100.5 309 30.7
CARHR200130 Cardamine hirsuta HOM05D003379 ORTHO05D003862 1.0e-18 98.6 427 27.4
Sp6g30680 Schrenkiella parvula HOM05D003379 ORTHO05D003862 8.7e-18 95.5 419 27.0
Aa31LG3G14350 Aethionema arabicum HOM05D003379 ORTHO05D003862 1.1e-17 95.1 436 28.2
Carub.0006s1148 Capsella rubella HOM05D003379 ORTHO05D003862 1.9e-17 94.4 425 28.7
RcHm_v2.0_Chr3g0475791 Rosa chinensis HOM05D003379 ORTHO05D003862 2.5e-17 94.0 349 28.1
ECA234G2936 Erigeron canadensis HOM05D003379 ORTHO05D003862 3.3e-17 93.6 400 28.0
FvH4_6g20211 Fragaria vesca HOM05D003379 ORTHO05D003862 1.3e-16 91.7 310 30.6
vmacro01023 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 1.3e-16 91.7 427 27.6
BraA10t44552Z Brassica rapa HOM05D003379 ORTHO05D003862 2.8e-16 90.5 425 27.3
AL6G23930 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 9.0e-15 85.5 424 28.5
AT5G13310 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 3.4e-14 83.6 428 28.3
A10p24890 Brassica napus HOM05D003379 ORTHO05D003862 3.4e-14 83.6 356 27.5
Lsat_1_v5_gn_4_1521 Lactuca sativa HOM05D003379 ORTHO05D003862 7.6e-14 82.4 311 31.2
HPP92_006450 Vanilla planifolia HOM05D003379 ORTHO05D003862 1.0e-13 82.0 276 29.7
Zm00001eb084870 Zea mays HOM05D003379 ORTHO05D003862 1.0e-13 82.0 435 25.1
Zm00001eb421370 Zea mays HOM05D003379 ORTHO05D003862 1.7e-13 81.3 437 24.9
SMO117G0242 Selaginella moellendorffii HOM05D002493 ORTHO05D003175 3.8e-13 80.1 395 25.8
Mapoly0001s0546 Marchantia polymorpha HOM05D003379 ORTHO05D003862 2.5e-12 77.4 226 31.0
BcaNung03374 Brassica carinata HOM05D003379 ORTHO05D003862 3.9e-10 70.1 194 30.9
Hma1.2p1_0421F.1_g149960 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 5.7e-09 66.2 96 44.8
SalBow6G4465 Salvia bowleyana HOM05D003379 ORTHO05D003862 5.7e-09 66.2 150 39.3
FAN05G4320 Fragaria x ananassa HOM05D003379 ORTHO05D003862 6.3e-08 62.8 150 37.3
BcaC01g02664 Brassica carinata HOM05D003379 ORTHO05D003862 8.2e-08 62.4 70 44.3
BolC3t18480H Brassica oleracea HOM05D003379 ORTHO05D003862 1.4e-07 61.6 70 44.3
BcaC09g48308 Brassica carinata HOM05D003379 ORTHO05D003862 2.4e-07 60.8 77 46.8
CSS0018885 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 3.1e-07 60.5 142 32.4
C03p62180 Brassica napus HOM05D003379 ORTHO05D003862 4.1e-07 60.1 70 42.9
FAN14G0132 Fragaria x ananassa HOM05D003379 ORTHO05D003862 5.3e-07 59.7 301 26.6
Pp3c5_23700 Physcomitrium patens HOM05D003379 ORTHO05D003862 5.3e-07 59.7 285 27.0
BcaC04g20129 Brassica carinata HOM05D003379 ORTHO05D003862 9.0e-07 58.9 189 29.1
BraA05t20213Z Brassica rapa HOM05D003379 ORTHO05D003862 2.0e-06 57.8 83 37.3
A05p12750 Brassica napus HOM05D003379 ORTHO05D003862 2.6e-06 57.4 112 32.1
BolC7t42848H Brassica oleracea HOM05D003379 ORTHO05D003862 2.6e-06 57.4 203 28.1


User provided reference genes

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