Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 2.2e-79 298.9 151 100.0
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 5.1e-60 234.6 150 79.3
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 1.9e-59 232.6 130 88.5
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 3.3e-59 231.9 150 77.3
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 4.3e-59 231.5 150 77.3
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 7.4e-59 230.7 151 79.5
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 1.3e-58 229.9 150 76.7
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 2.1e-58 229.2 149 77.9
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 1.4e-57 226.5 149 76.5
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 2.4e-57 225.7 147 78.9
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 3.1e-57 225.3 150 77.3
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 3.1e-57 225.3 149 79.2
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 4.0e-57 224.9 147 78.9
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 5.3e-57 224.6 149 76.5
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 5.3e-57 224.6 149 77.9
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 5.3e-57 224.6 149 77.9
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 5.3e-57 224.6 150 76.7
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 6.9e-57 224.2 149 78.5
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 6.9e-57 224.2 149 78.5
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 1.2e-56 223.4 150 76.0
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 1.5e-56 223.0 154 77.3
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 1.5e-56 223.0 153 77.8
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 1.5e-56 223.0 150 76.0
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 2.0e-56 222.6 147 78.9
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 2.6e-56 222.2 149 77.2
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 2.6e-56 222.2 149 77.9
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 5.8e-56 221.1 127 85.8
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 5.8e-56 221.1 127 85.8
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 5.8e-56 221.1 149 77.2
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 7.6e-56 220.7 146 76.7
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 7.6e-56 220.7 150 73.3
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 9.9e-56 220.3 150 73.3
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 1.7e-55 219.5 150 72.7
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 1.7e-55 219.5 150 72.7
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.7e-55 219.5 127 85.0
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 2.9e-55 218.8 150 74.7
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 2.9e-55 218.8 149 76.5
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 2.9e-55 218.8 150 75.3
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 3.8e-55 218.4 149 76.5
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 6.4e-55 217.6 150 72.7
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 6.4e-55 217.6 150 74.7
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 8.4e-55 217.2 154 74.7
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 8.4e-55 217.2 149 75.8
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 8.4e-55 217.2 147 76.9
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 1.1e-54 216.9 149 74.5
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 1.1e-54 216.9 150 74.7
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.4e-54 216.5 149 75.2
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.4e-54 216.5 149 75.2
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 1.4e-54 216.5 149 75.2
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 1.4e-54 216.5 149 75.8
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 1.9e-54 216.1 169 69.8
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 2.4e-54 215.7 150 73.3
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 2.4e-54 215.7 128 81.2
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 3.2e-54 215.3 150 73.3
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 5.5e-54 214.5 150 72.7
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 9.3e-54 213.8 133 79.7
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 2.7e-53 212.2 150 72.7
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 2.7e-53 212.2 149 71.8
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 3.5e-53 211.8 155 72.9
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 7.9e-53 210.7 149 72.5
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 7.9e-53 210.7 150 75.3
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 1.8e-52 209.5 149 73.8
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 2.3e-52 209.1 149 75.2
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 5.6e-51 204.5 134 73.9
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 3.7e-50 201.8 152 69.1
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 6.2e-50 201.1 152 69.1
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 6.2e-50 201.1 126 80.2
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 8.1e-50 200.7 152 69.7
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 1.1e-49 200.3 150 68.7
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 1.1e-49 200.3 150 68.7
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 1.1e-49 200.3 150 68.7
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 1.1e-49 200.3 150 69.3
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 2.4e-49 199.1 144 73.6
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 2.4e-49 199.1 149 67.8
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 3.1e-49 198.7 149 67.8
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 9.0e-49 197.2 133 76.7
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 1.2e-48 196.8 149 67.8
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 3.4e-48 195.3 122 77.0
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 3.4e-48 195.3 150 67.3
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.4e-48 195.3 153 68.0
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.4e-48 195.3 153 68.0
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 7.6e-48 194.1 150 67.3
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 7.6e-48 194.1 150 67.3
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 2.2e-47 192.6 132 75.8
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 3.8e-47 191.8 123 76.4
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 1.4e-46 189.9 132 74.2
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 1.6e-45 186.4 152 63.8
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 3.0e-44 182.2 138 70.3
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 6.7e-44 181.0 136 67.6
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 2.5e-43 179.1 152 61.2
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 1.3e-42 176.8 150 61.3
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.3e-42 176.8 122 72.1
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 1.8e-41 172.9 149 64.4
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 1.5e-40 169.9 137 59.9
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 3.8e-39 165.2 162 57.4
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 8.2e-34 147.5 136 60.3
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 1.0e-31 140.6 150 54.0
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 3.8e-31 138.7 122 56.6
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 1.9e-30 136.3 152 53.9
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 4.2e-30 135.2 149 53.0
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 2.6e-24 115.9 87 70.1
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 2.6e-19 99.4 58 79.3
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 5.7e-19 98.2 86 58.1
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 4.2e-14 82.0 53 75.5
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 2.1e-13 79.7 81 56.8
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 6.7e-12 74.7 81 48.1
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.3e-10 70.5 67 58.2
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 1.7e-10 70.1 147 29.3
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 1.6e-08 63.5 53 67.9
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 1.7e-07 60.1 42 69.0
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 3.2e-06 55.8 77 37.7


User provided reference genes

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