Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027885.1 Olea europaea HOM05D003663 ORTHO05D005327 1.4e-125 453.0 229 100.0
Oeu060390.1 Olea europaea HOM05D002083 ORTHO05D000332 9.4e-90 334.0 213 79.8
Peaxi162Scf00815g00311 Petunia axillaris HOM05D003663 ORTHO05D005327 3.4e-55 219.2 225 52.9
MBI04_g20973_MAGBIO Magnolia biondii HOM05D003663 ORTHO05D005327 4.4e-55 218.8 216 56.5
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 1.1e-53 214.2 235 54.5
TAR374G1477 Trochodendron aralioides HOM05D003663 ORTHO05D005327 7.0e-53 211.5 214 55.1
Duzib177G0557 Durio zibethinus HOM05D003663 ORTHO05D005327 2.7e-52 209.5 204 56.4
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 5.9e-52 208.4 212 54.7
Duzib106G1874 Durio zibethinus HOM05D003663 ORTHO05D005327 7.7e-52 208.0 206 57.3
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 1.3e-51 207.2 180 62.8
Rhsim09G0213000 Rhododendron simsii HOM05D003663 ORTHO05D005327 1.7e-51 206.8 203 56.2
vmacro22176 Vaccinium macrocarpon HOM05D003663 ORTHO05D005327 8.6e-51 204.5 197 58.4
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 1.9e-50 203.4 207 53.1
EL10Ac3g05074 Beta vulgaris HOM05D003663 ORTHO05D005327 2.1e-49 199.9 174 59.8
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 3.6e-49 199.1 164 61.0
Manes.09G126900 Manihot esculenta HOM05D003663 ORTHO05D005327 6.1e-49 198.4 213 53.1
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 6.1e-49 198.4 204 53.9
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 1.8e-48 196.8 209 51.2
PGSC0003DMG400027034 Solanum tuberosum HOM05D003663 ORTHO05D005327 1.8e-48 196.8 200 53.5
Lsat_1_v5_gn_2_136720 Lactuca sativa HOM05D003663 ORTHO05D005327 8.9e-48 194.5 196 54.1
Potri.019G049600 Populus trichocarpa HOM05D003663 ORTHO05D005327 8.9e-48 194.5 196 55.1
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 1.2e-47 194.1 173 57.2
Nitab4.5_0001762g0070 Nicotiana tabacum HOM05D003663 ORTHO05D005327 1.5e-47 193.7 238 50.4
Lj3P887T57 Lonicera japonica HOM05D003663 ORTHO05D005327 2.6e-47 193.0 192 55.7
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 5.7e-47 191.8 182 56.0
SGA_v2.0_scaffold50G18444 Striga asiatica HOM05D003663 ORTHO05D005327 9.8e-47 191.0 204 51.0
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 2.2e-46 189.9 230 51.3
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 3.7e-46 189.1 235 48.1
Sabra19G0059300 Salix brachista HOM05D003663 ORTHO05D005327 3.7e-46 189.1 213 52.1
Duzib128G0448 Durio zibethinus HOM05D003663 ORTHO05D005327 4.9e-46 188.7 204 52.5
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 1.4e-45 187.2 205 54.1
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 2.4e-45 186.4 208 50.0
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 2.4e-45 186.4 141 61.7
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 3.2e-45 186.0 230 48.7
HanXRQChr14g0462981 Helianthus annuus HOM05D003663 ORTHO05D005327 7.0e-45 184.9 136 62.5
Rhsim03G0221600 Rhododendron simsii HOM05D003663 ORTHO05D005327 7.0e-45 184.9 187 52.4
Sopen06g029160 Solanum pennellii HOM05D003663 ORTHO05D005327 7.0e-45 184.9 233 45.9
TWI34G0428 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 7.0e-45 184.9 185 55.1
ECA233G1163 Erigeron canadensis HOM05D003663 ORTHO05D005327 9.2e-45 184.5 148 58.1
QL09p023778 Quercus lobata HOM05D003663 ORTHO05D005327 1.2e-44 184.1 232 48.3
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 1.6e-44 183.7 212 49.5
COL.COLO4_06064 Corchorus olitorius HOM05D003663 ORTHO05D005327 4.5e-44 182.2 193 52.8
Cpa.g.sc504.5 Carica papaya HOM05D003663 ORTHO05D005327 7.8e-44 181.4 199 50.3
Aqoxy3G02161 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.0e-43 181.0 246 43.5
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 1.3e-43 180.6 184 54.9
Cc00_g28240 Coffea canephora HOM05D003663 ORTHO05D005327 1.7e-43 180.3 155 60.6
CANSAT21G0248 Cannabis sativa HOM05D003663 ORTHO05D005327 2.9e-43 179.5 243 43.2
VMungo0251G1526 Vigna mungo HOM05D003663 ORTHO05D005327 2.9e-43 179.5 214 49.5
Gorai.007G348900 Gossypium raimondii HOM05D003663 ORTHO05D005327 3.9e-43 179.1 160 59.4
Gohir.D11G318900 Gossypium hirsutum HOM05D003663 ORTHO05D005327 6.6e-43 178.3 209 52.2
PSO063G6858 Papaver somniferum HOM05D003663 ORTHO05D005327 1.9e-42 176.8 204 47.1
Gohir.A11G303600 Gossypium hirsutum HOM05D003663 ORTHO05D005327 4.3e-42 175.6 209 52.2
PSO782G5365 Papaver somniferum HOM05D003663 ORTHO05D005327 4.3e-42 175.6 194 49.0
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 1.2e-41 174.1 199 50.8
Eucgr.K00086 Eucalyptus grandis HOM05D003663 ORTHO05D005327 1.6e-41 173.7 182 50.5
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 2.8e-41 172.9 205 48.8
PGR142G2930 Punica granatum HOM05D003663 ORTHO05D005327 1.4e-40 170.6 233 44.6
AT5G16920 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 2.3e-40 169.9 224 47.3
Ciclev10021912m.g Citrus clementina HOM05D003663 ORTHO05D005327 2.3e-40 169.9 234 47.0
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 6.8e-40 168.3 234 47.0
Actinidia33794 Actinidia chinensis HOM05D003663 ORTHO05D005327 1.5e-39 167.2 112 69.6
AL6G27920 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 1.3e-38 164.1 209 47.8
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 1.7e-38 163.7 201 48.3
THA.LOC104827213 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 1.1e-37 161.0 218 48.2
CARHR196240 Cardamine hirsuta HOM05D003663 ORTHO05D005327 2.4e-37 159.8 220 45.9
Thhalv10014405m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 5.4e-37 158.7 235 43.8
Thecc.05G213800 Theobroma cacao HOM05D003663 ORTHO05D005327 3.0e-35 152.9 204 48.0
BraA02t05351Z Brassica rapa HOM05D003663 ORTHO05D005327 6.6e-35 151.8 166 48.8
Sp6g27190 Schrenkiella parvula HOM05D003663 ORTHO05D005327 6.6e-35 151.8 221 43.0
BcaNung00434 Brassica carinata HOM05D003663 ORTHO05D005327 8.6e-35 151.4 162 48.8
A02p03870 Brassica napus HOM05D003663 ORTHO05D005327 1.1e-34 151.0 162 48.8
BolC2t06783H Brassica oleracea HOM05D003663 ORTHO05D005327 3.3e-34 149.4 216 44.4
BcaC03g18525 Brassica carinata HOM05D003663 ORTHO05D005327 2.8e-33 146.4 216 43.5
C02p08670 Brassica napus HOM05D003663 ORTHO05D005327 2.8e-33 146.4 216 43.5
Carub.0006s1513 Capsella rubella HOM05D003663 ORTHO05D005327 2.3e-32 143.3 224 42.4
Prupe.2G326500 Prunus persica HOM05D003663 ORTHO05D005327 6.8e-32 141.7 199 45.2
ATR0829G139 Amborella trichopoda HOM05D003663 ORTHO05D005327 1.2e-31 141.0 175 43.4
Ca_06459_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 6.4e-30 135.2 158 43.0
Aqoxy3G02718 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 9.2e-29 131.3 154 39.6
Medtr5g097370 Medicago truncatula HOM05D003663 ORTHO05D005327 9.2e-29 131.3 156 39.7
LjContig00081g0009748 Lotus japonicus HOM05D003663 ORTHO05D005327 2.1e-28 130.2 180 38.9
Psat2g004440 Pisum sativum HOM05D003663 ORTHO05D005327 2.1e-28 130.2 167 40.1
TPR.G1287 Trifolium pratense HOM05D003663 ORTHO05D005327 3.5e-28 129.4 148 41.2
Glyma.14G007200 Glycine max HOM05D003663 ORTHO05D005327 4.6e-28 129.0 170 40.0
Os12g0233900 Oryza sativa ssp. japonica HOM05D003663 ORTHO05D005327 4.6e-28 129.0 210 37.1
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 1.1e-26 124.4 144 43.1
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea HOM05D003663 ORTHO05D005327 3.3e-26 122.9 185 37.3
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea HOM05D003663 ORTHO05D005327 3.3e-26 122.9 185 37.3
Phvul.008G285700 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 3.3e-26 122.9 149 43.0
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 5.6e-26 122.1 162 41.4
TAR627G0054 Trochodendron aralioides HOM05D003663 ORTHO05D005327 1.2e-25 120.9 151 42.4
Actinidia34308 Actinidia chinensis HOM05D003663 ORTHO05D005327 2.8e-25 119.8 77 74.0
ATR0624G116 Amborella trichopoda HOM05D003663 ORTHO05D005327 2.8e-25 119.8 167 38.3
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 3.6e-25 119.4 145 44.1
VMungo0647G1338 Vigna mungo HOM05D003663 ORTHO05D005327 3.6e-25 119.4 159 39.6
TWI36G0551 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 1.4e-24 117.5 149 40.3
VMungo0540G0424 Vigna mungo HOM05D003663 ORTHO05D005327 1.4e-24 117.5 134 41.8
Lalb_Chr17g0349111 Lupinus albus HOM05D003663 ORTHO05D005327 3.1e-24 116.3 126 45.2
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 3.1e-24 116.3 148 38.5
Prupe.4G006800 Prunus persica HOM05D003663 ORTHO05D005327 6.8e-24 115.2 129 43.4
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 8.9e-24 114.8 134 41.8
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 8.9e-24 114.8 134 41.8
MELO3C024107.2 Cucumis melo HOM05D003663 ORTHO05D005327 7.6e-23 111.7 130 43.1
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 7.6e-23 111.7 143 39.9
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 9.9e-23 111.3 132 41.7
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 9.9e-23 111.3 132 41.7
Sed0003500 Sechium edule HOM05D003663 ORTHO05D005327 1.3e-22 110.9 143 41.3
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 1.7e-22 110.5 132 41.7
Nn1g01862 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.7e-22 110.5 126 46.8
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 2.9e-22 109.8 132 40.9
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 2.9e-22 109.8 132 41.7
ClCG02G002710 Citrullus lanatus HOM05D003663 ORTHO05D005327 2.9e-22 109.8 137 41.6
BcaC04g23626 Brassica carinata HOM05D003663 ORTHO05D005327 4.9e-22 109.0 132 40.9
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 4.9e-22 109.0 146 39.0
CsaV3_7G023690 Cucumis sativus L. HOM05D003663 ORTHO05D005327 4.9e-22 109.0 141 41.1
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 4.9e-22 109.0 132 40.9
FAN25G1738 Fragaria x ananassa HOM05D003663 ORTHO05D005327 4.9e-22 109.0 131 40.5
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 4.9e-22 109.0 143 37.8
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 1.4e-21 107.5 130 42.3
FvH4_3g00560 Fragaria vesca HOM05D003663 ORTHO05D005327 1.9e-21 107.1 131 38.9
Lalb_Chr16g0386341 Lupinus albus HOM05D003663 ORTHO05D005327 1.9e-21 107.1 101 55.4
Phvul.006G141400 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 3.2e-21 106.3 134 38.8
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 9.2e-21 104.8 134 38.1
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 2.1e-20 103.6 75 70.7
MELO3C028604.2 Cucumis melo HOM05D003663 ORTHO05D005327 3.5e-20 102.8 182 33.5
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 4.6e-20 102.4 159 36.5
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 4.6e-20 102.4 159 36.5
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 4.6e-20 102.4 159 36.5
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 6.0e-20 102.1 159 36.5
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 6.0e-20 102.1 159 36.5
PGR142G2458 Punica granatum HOM05D003663 ORTHO05D005327 6.0e-20 102.1 154 35.7
Aqoxy1G04227 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.3e-19 100.9 142 39.4
Ciclev10017620m.g Citrus clementina HOM05D003663 ORTHO05D005327 1.3e-19 100.9 134 39.6
MD09G1122000 Malus domestica HOM05D003663 ORTHO05D005327 1.7e-19 100.5 134 40.3
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 2.3e-19 100.1 129 40.3
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 5.1e-19 99.0 135 39.3
Sed0016160 Sechium edule HOM05D003663 ORTHO05D005327 5.1e-19 99.0 122 43.4
TWI38G0283 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 8.6e-19 98.2 136 34.6
Aqoxy1G04229 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.1e-18 97.8 136 34.6
PSO302G0013 Papaver somniferum HOM05D003663 ORTHO05D005327 1.9e-18 97.1 158 33.5
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 2.5e-18 96.7 129 37.2
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 2.5e-18 96.7 129 37.2
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 4.3e-18 95.9 130 38.5
Eucgr.L03441 Eucalyptus grandis HOM05D003663 ORTHO05D005327 9.6e-18 94.7 117 41.0
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 9.6e-18 94.7 158 32.9
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 2.8e-17 93.2 133 36.1
THA.LOC104826655 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 4.7e-17 92.4 151 37.1
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 8.1e-17 91.7 116 37.9
Sed0002316 Sechium edule HOM05D003663 ORTHO05D005327 8.9e-16 88.2 121 34.7
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.2e-15 87.8 94 41.5
RcHm_v2.0_Chr2g0156681 Rosa chinensis HOM05D003663 ORTHO05D005327 1.2e-15 87.8 98 40.8
Sed0020467 Sechium edule HOM05D003663 ORTHO05D005327 4.4e-15 85.9 121 33.9
Prupe.3G201600 Prunus persica HOM05D003663 ORTHO05D005327 1.3e-14 84.3 127 37.8
BcaB07g29963 Brassica carinata HOM05D003663 ORTHO05D005327 8.4e-14 81.6 90 43.3
ClCG01G010650 Citrullus lanatus HOM05D003663 ORTHO05D005327 1.1e-13 81.3 121 32.2
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 9.3e-13 78.2 80 45.0
CsaV3_7G002660 Cucumis sativus L. HOM05D003663 ORTHO05D005327 3.5e-12 76.3 106 37.7
Glyma.02G305800 Glycine max HOM05D003663 ORTHO05D005327 6.0e-12 75.5 83 43.4
A02p39370 Brassica napus HOM05D003663 ORTHO05D010021 3.0e-11 73.2 80 41.2
Medtr2g026520 Medicago truncatula HOM05D003663 ORTHO05D005327 9.6e-10 68.2 99 38.4
Potri.016G009000 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.8e-08 63.9 60 48.3
Mapoly0095s0061 Marchantia polymorpha HOM05D005423 ORTHO05D006223 1.7e-06 57.4 195 26.2
Pp3c1_4130 Physcomitrium patens HOM05D022662 ORTHO05D006223 1.7e-06 57.4 147 28.6


User provided reference genes

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