Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027879.1 Olea europaea HOM05D003603 ORTHO05D004186 2.6e-112 408.7 202 100.0
Oeu017100.1 Olea europaea HOM05D003603 ORTHO05D004186 7.3e-46 188.0 164 64.6
QL12p000179 Quercus lobata HOM05D003603 ORTHO05D004186 1.6e-32 143.7 182 50.5
Dinv06911 Davidia involucrata HOM05D003603 ORTHO05D004186 6.0e-32 141.7 172 50.0
Hma1.2p1_1819F.1_g304070 Hydrangea macrophylla HOM05D003603 ORTHO05D004186 1.1e-30 137.5 191 48.2
MSTRG.1790 Avicennia marina HOM05D003603 ORTHO05D004186 1.9e-30 136.7 171 50.9
Dinv29021 Davidia involucrata HOM05D003603 ORTHO05D004186 2.5e-30 136.3 166 50.0
SGA_v2.0_scaffold96G29046 Striga asiatica HOM05D003603 ORTHO05D004186 5.6e-30 135.2 171 49.7
Manes.15G192766 Manihot esculenta HOM05D003603 ORTHO05D004186 2.1e-29 133.3 170 49.4
Actinidia01335 Actinidia chinensis HOM05D003603 ORTHO05D004186 4.8e-29 132.1 172 49.4
Ca_25158_v3 Cicer arietinum L. HOM05D003603 ORTHO05D004186 1.1e-28 131.0 174 47.1
Cc08_g03850 Coffea canephora HOM05D003603 ORTHO05D004186 1.1e-28 131.0 174 49.4
CSS0011703 Camellia sinensis var. sinensis HOM05D003603 ORTHO05D004186 1.8e-28 130.2 175 47.4
HanXRQChr13g0404821 Helianthus annuus HOM05D003603 ORTHO05D004186 1.8e-28 130.2 174 47.7
CSS0028298 Camellia sinensis var. sinensis HOM05D003603 ORTHO05D004186 2.4e-28 129.8 175 48.6
Thecc.03G312100 Theobroma cacao HOM05D003603 ORTHO05D004186 2.4e-28 129.8 170 47.6
PGSC0003DMG400009296 Solanum tuberosum HOM05D003603 ORTHO05D004186 3.1e-28 129.4 174 49.4
Phvul.002G133800 Phaseolus vulgaris HOM05D003603 ORTHO05D004186 4.0e-28 129.0 171 49.1
Lsat_1_v5_gn_6_17681 Lactuca sativa HOM05D003603 ORTHO05D004186 5.3e-28 128.6 204 41.7
Sopen08g024820 Solanum pennellii HOM05D003603 ORTHO05D004186 5.3e-28 128.6 174 48.9
Glyma.09G210200 Glycine max HOM05D003603 ORTHO05D004186 6.9e-28 128.3 171 49.1
Nitab4.5_0005370g0020 Nicotiana tabacum HOM05D003603 ORTHO05D004186 6.9e-28 128.3 174 48.9
Eucgr.D02636 Eucalyptus grandis HOM05D003603 ORTHO05D004186 9.0e-28 127.9 170 46.5
Peaxi162Scf00052g00329 Petunia axillaris HOM05D003603 ORTHO05D004186 9.0e-28 127.9 174 48.9
Solyc08g076180.3 Solanum lycopersicum HOM05D003603 ORTHO05D004186 9.0e-28 127.9 174 48.9
Potri.001G135000 Populus trichocarpa HOM05D003603 ORTHO05D004186 1.2e-27 127.5 172 47.1
RcHm_v2.0_Chr7g0212381 Rosa chinensis HOM05D003603 ORTHO05D004186 1.2e-27 127.5 169 48.5
Actinidia29278 Actinidia chinensis HOM05D003603 ORTHO05D004186 1.5e-27 127.1 172 47.7
arahy.Tifrunner.gnm1.ann1.JMHQ16 Arachis hypogaea HOM05D003603 ORTHO05D004186 1.5e-27 127.1 170 47.1
arahy.Tifrunner.gnm1.ann1.Z69TJ6 Arachis hypogaea HOM05D003603 ORTHO05D004186 1.5e-27 127.1 170 47.1
Peaxi162Scf00185g01122 Petunia axillaris HOM05D003603 ORTHO05D004186 1.5e-27 127.1 166 48.2
VMungo1215G0432 Vigna mungo HOM05D003603 ORTHO05D004186 1.5e-27 127.1 171 49.1
GSVIVG01013000001 Vitis vinifera HOM05D003603 ORTHO05D004186 1.5e-27 127.1 174 47.1
Hma1.2p1_0803F.1_g220845 Hydrangea macrophylla HOM05D003603 ORTHO05D004186 2.0e-27 126.7 175 48.0
Hma1.2p1_0803F.1_g220850 Hydrangea macrophylla HOM05D003603 ORTHO05D004186 2.0e-27 126.7 175 48.0
Glyma.01G010900 Glycine max HOM05D003603 ORTHO05D004186 2.6e-27 126.3 171 48.5
MSTRG.25700 Avicennia marina HOM05D003603 ORTHO05D004186 4.5e-27 125.6 174 47.1
Prupe.5G026000 Prunus persica HOM05D003603 ORTHO05D004186 4.5e-27 125.6 170 47.1
Medtr5g027940 Medicago truncatula HOM05D003603 ORTHO05D004186 5.8e-27 125.2 174 46.6
TAR375G0833 Trochodendron aralioides HOM05D003603 ORTHO05D004186 5.8e-27 125.2 172 47.7
FvH4_5g23370 Fragaria vesca HOM05D003603 ORTHO05D004186 7.6e-27 124.8 170 47.6
FAN08G0102 Fragaria x ananassa HOM05D003603 ORTHO05D004186 7.6e-27 124.8 170 47.6
FAN18G1056 Fragaria x ananassa HOM05D003603 ORTHO05D004186 7.6e-27 124.8 170 47.6
FAN18G2371 Fragaria x ananassa HOM05D003603 ORTHO05D004186 7.6e-27 124.8 170 47.6
CSS0006858 Camellia sinensis var. sinensis HOM05D003603 ORTHO05D004186 1.3e-26 124.0 175 48.0
FAN04G2484 Fragaria x ananassa HOM05D003603 ORTHO05D004186 1.3e-26 124.0 170 47.1
Nitab4.5_0000301g0080 Nicotiana tabacum HOM05D003603 ORTHO05D004186 1.3e-26 124.0 174 47.7
Ciclev10002760m.g Citrus clementina HOM05D003603 ORTHO05D004186 1.7e-26 123.6 175 46.9
Sabra01G0104400 Salix brachista HOM05D003603 ORTHO05D004186 1.7e-26 123.6 171 45.6
Migut.E01327 Erythranthe guttata HOM05D003603 ORTHO05D004186 2.2e-26 123.2 177 47.5
Thhalv10008962m.g Eutrema salsugineum HOM05D003603 ORTHO05D004186 2.2e-26 123.2 183 43.7
FAN13G0864 Fragaria x ananassa HOM05D003603 ORTHO05D004186 3.8e-26 122.5 170 47.1
COL.COLO4_16913 Corchorus olitorius HOM05D003603 ORTHO05D004186 4.9e-26 122.1 164 45.1
Lsat_1_v5_gn_6_73320 Lactuca sativa HOM05D003603 ORTHO05D004186 4.9e-26 122.1 176 47.7
Duzib068G0284 Durio zibethinus HOM05D003603 ORTHO05D004186 6.4e-26 121.7 170 44.7
Gohir.A03G000024 Gossypium hirsutum HOM05D003603 ORTHO05D004186 6.4e-26 121.7 168 47.0
Lj2g0008166 Lotus japonicus HOM05D003603 ORTHO05D004186 6.4e-26 121.7 169 46.2
vmacro00238 Vaccinium macrocarpon HOM05D003603 ORTHO05D004186 1.4e-25 120.6 189 45.5
Lalb_Chr05g0215661 Lupinus albus HOM05D003603 ORTHO05D004186 2.4e-25 119.8 177 45.2
PGR031G2143 Punica granatum HOM05D003603 ORTHO05D004186 2.4e-25 119.8 169 43.8
Gohir.D03G177000 Gossypium hirsutum HOM05D003603 ORTHO05D004186 4.2e-25 119.0 168 46.4
Carub.0001s3027 Capsella rubella HOM05D003603 ORTHO05D004186 9.3e-25 117.9 182 42.9
TAR636G1298 Trochodendron aralioides HOM05D003603 ORTHO05D004186 9.3e-25 117.9 178 43.8
Lalb_Chr16g0380941 Lupinus albus HOM05D003603 ORTHO05D004186 1.2e-24 117.5 171 45.0
A09p34230 Brassica napus HOM05D003603 ORTHO05D004186 1.6e-24 117.1 168 43.5
BraA09t38971Z Brassica rapa HOM05D003603 ORTHO05D004186 1.6e-24 117.1 168 43.5
CARHR031290 Cardamine hirsuta HOM05D003603 ORTHO05D004186 1.6e-24 117.1 182 42.9
Manes.17G016002 Manihot esculenta HOM05D003603 ORTHO05D004186 1.6e-24 117.1 171 43.3
MELO3C013813.2 Cucumis melo HOM05D003603 ORTHO05D004186 2.1e-24 116.7 164 46.3
ECA240G0026 Erigeron canadensis HOM05D003584 ORTHO05D004148 2.1e-24 116.7 179 44.7
Nn1g01903 Nelumbo nucifera HOM05D003603 ORTHO05D004186 2.1e-24 116.7 170 44.1
Sp1g27670 Schrenkiella parvula HOM05D003603 ORTHO05D004186 2.1e-24 116.7 172 45.3
TPR.G19474 Trifolium pratense HOM05D003603 ORTHO05D004186 2.1e-24 116.7 170 44.1
TWI15G1018 Tripterygium wilfordii HOM05D003603 ORTHO05D004186 2.1e-24 116.7 172 45.3
Aa31LG2G14110 Aethionema arabicum HOM05D003603 ORTHO05D004186 2.7e-24 116.3 172 44.2
CiPaw.12G069800 Carya illinoinensis HOM05D003603 ORTHO05D004186 2.7e-24 116.3 170 45.3
TWI81G0448 Tripterygium wilfordii HOM05D003603 ORTHO05D004186 2.7e-24 116.3 164 45.7
BcaC05g27220 Brassica carinata HOM05D003603 ORTHO05D004186 3.5e-24 115.9 168 45.8
BolC5t31853H Brassica oleracea HOM05D003603 ORTHO05D004186 3.5e-24 115.9 168 45.8
THA.LOC104798506 Tarenaya hassleriana HOM05D003603 ORTHO05D004186 4.6e-24 115.5 171 45.0
CsaV3_3G001240 Cucumis sativus L. HOM05D003603 ORTHO05D004186 6.0e-24 115.2 164 45.7
Rhsim07G0134300 Rhododendron simsii HOM05D003603 ORTHO05D004186 6.0e-24 115.2 221 40.7
Atru.chr6.1552 Acer truncatum HOM05D003603 ORTHO05D004186 7.9e-24 114.8 171 45.0
ECA233G2030 Erigeron canadensis HOM05D003603 ORTHO05D004186 7.9e-24 114.8 167 46.7
HanXRQChr03g0082031 Helianthus annuus HOM05D003603 ORTHO05D004186 7.9e-24 114.8 159 47.2
AT1G31940 Arabidopsis thaliana HOM05D003603 ORTHO05D004186 1.0e-23 114.4 182 41.8
SalBow8G3962 Salvia bowleyana HOM05D003603 ORTHO05D004186 1.0e-23 114.4 173 45.1
Migut.A00590 Erythranthe guttata HOM05D003603 ORTHO05D004186 1.3e-23 114.0 169 45.6
Sed0026512 Sechium edule HOM05D003603 ORTHO05D004186 2.3e-23 113.2 170 45.3
SalBow1G3570 Salvia bowleyana HOM05D003603 ORTHO05D004186 3.0e-23 112.8 169 44.4
SalBow1G4269 Salvia bowleyana HOM05D003603 ORTHO05D004186 3.0e-23 112.8 169 44.4
CAN.G474.26 Capsicum annuum HOM05D003603 ORTHO05D004186 5.1e-23 112.1 177 43.5
Rhsim11G0028200 Rhododendron simsii HOM05D003603 ORTHO05D004186 5.1e-23 112.1 166 44.6
AL1G46040 Arabidopsis lyrata HOM05D003603 ORTHO05D004186 6.7e-23 111.7 182 41.8
MD06G1024900 Malus domestica HOM05D003603 ORTHO05D004186 6.7e-23 111.7 170 44.1
Psat2g140080 Pisum sativum HOM05D003603 ORTHO05D004186 8.7e-23 111.3 170 41.8
PSO063G1743 Papaver somniferum HOM05D003603 ORTHO05D004186 1.1e-22 110.9 168 41.1
Aqoxy3G02143 Aquilegia oxysepala HOM05D003603 ORTHO05D004186 1.9e-22 110.2 168 41.7
Lj8A318T46 Lonicera japonica HOM05D003603 ORTHO05D004186 1.9e-22 110.2 167 46.7
Hund11105 Selenicereus undatus HOM05D003603 ORTHO05D004186 2.5e-22 109.8 170 40.6
CANSAT21G0457 Cannabis sativa HOM05D003603 ORTHO05D004186 3.3e-22 109.4 165 43.6
CANSAT56G3990 Cannabis sativa HOM05D003603 ORTHO05D004186 3.3e-22 109.4 165 43.6
BcaC05g27937 Brassica carinata HOM05D003603 ORTHO05D004186 4.3e-22 109.0 170 41.8
C05p39410 Brassica napus HOM05D003603 ORTHO05D004186 4.3e-22 109.0 170 41.8
BolC5t32678H Brassica oleracea HOM05D003603 ORTHO05D004186 4.3e-22 109.0 170 41.8
Nn3g19353 Nelumbo nucifera HOM05D003603 ORTHO05D004186 5.6e-22 108.6 170 41.2
Nitab4.5_0002429g0050 Nicotiana tabacum HOM05D003603 ORTHO05D004186 5.6e-22 108.6 171 43.9
SGA_v2.0_scaffold111G31383 Striga asiatica HOM05D003603 ORTHO05D004186 5.6e-22 108.6 168 42.9
Gohir.A11G028400 Gossypium hirsutum HOM05D003603 ORTHO05D004186 7.4e-22 108.2 170 43.5
Nitab4.5_0001632g0070 Nicotiana tabacum HOM05D003603 ORTHO05D004186 7.4e-22 108.2 170 42.4
A05p25320 Brassica napus HOM05D003603 ORTHO05D004186 1.3e-21 107.5 170 41.2
BraA05t21417Z Brassica rapa HOM05D003603 ORTHO05D004186 1.3e-21 107.5 170 41.2
CARHR129770 Cardamine hirsuta HOM05D003603 ORTHO05D004186 1.6e-21 107.1 180 39.4
Gohir.D11G030800 Gossypium hirsutum HOM05D003603 ORTHO05D004186 1.6e-21 107.1 170 43.5
Gorai.007G033700 Gossypium raimondii HOM05D003603 ORTHO05D004186 2.1e-21 106.7 170 43.5
Aa31LG9G15610 Aethionema arabicum HOM05D003603 ORTHO05D004186 2.8e-21 106.3 169 40.8
AL4G31620 Arabidopsis lyrata HOM05D003603 ORTHO05D004186 3.7e-21 105.9 173 42.2
BcaB03g13776 Brassica carinata HOM05D003603 ORTHO05D004186 3.7e-21 105.9 172 41.9
DCAR_004264 Daucus carota HOM05D003603 ORTHO05D004186 3.7e-21 105.9 178 43.8
MBI04_g20981_MAGBIO Magnolia biondii HOM05D003603 ORTHO05D004186 3.7e-21 105.9 171 39.8
DCAR_008204 Daucus carota HOM05D003603 ORTHO05D004186 1.4e-20 104.0 177 42.9
Sopen06g021730 Solanum pennellii HOM05D003603 ORTHO05D004186 1.4e-20 104.0 172 40.7
Ah.12g055980 Amaranthus hybridus HOM05D003603 ORTHO05D004186 1.8e-20 103.6 171 39.2
Sp4g17800 Schrenkiella parvula HOM05D003603 ORTHO05D004186 2.4e-20 103.2 180 40.6
PSO782G4801 Papaver somniferum HOM05D003603 ORTHO05D004186 3.1e-20 102.8 168 39.9
PGSC0003DMG400016765 Solanum tuberosum HOM05D003603 ORTHO05D004186 3.1e-20 102.8 173 41.0
Sc07g0008400 Simmondsia chinensis HOM05D003603 ORTHO05D004186 6.9e-20 101.7 171 40.9
Hund14334 Selenicereus undatus HOM05D003603 ORTHO05D004186 9.0e-20 101.3 168 40.5
Solyc06g066290.3 Solanum lycopersicum HOM05D003603 ORTHO05D004186 9.0e-20 101.3 173 41.6
Ah.07g201360 Amaranthus hybridus HOM05D003603 ORTHO05D004186 1.5e-19 100.5 165 38.8
BraA05t19955Z Brassica rapa HOM05D003603 ORTHO05D004186 2.0e-19 100.1 167 39.5
Carub.0004s1726 Capsella rubella HOM05D003603 ORTHO05D004186 2.0e-19 100.1 173 38.2
EL10Ac5g11930 Beta vulgaris HOM05D003603 ORTHO05D004186 3.4e-19 99.4 174 39.1
A04p26990 Brassica napus HOM05D003603 ORTHO05D004186 3.4e-19 99.4 184 40.2
BraA04t18200Z Brassica rapa HOM05D003603 ORTHO05D004186 3.4e-19 99.4 184 40.2
A05p10140 Brassica napus HOM05D003603 ORTHO05D004186 1.0e-18 97.8 167 38.9
Thhalv10017363m.g Eutrema salsugineum HOM05D003603 ORTHO05D004186 1.7e-18 97.1 167 40.7
AUR62007409 Chenopodium quinoa HOM05D003603 ORTHO05D004186 2.2e-18 96.7 165 39.4
AUR62027323 Chenopodium quinoa HOM05D003603 ORTHO05D004186 2.2e-18 96.7 171 39.2
QL07p005886 Quercus lobata HOM05D003603 ORTHO05D004186 3.8e-18 95.9 104 52.9
BcaB02g09414 Brassica carinata HOM05D003603 ORTHO05D004186 4.9e-18 95.5 160 39.4
C04p64400 Brassica napus HOM05D003603 ORTHO05D004186 3.2e-17 92.8 183 39.3
BolC4t27924H Brassica oleracea HOM05D003603 ORTHO05D004186 3.2e-17 92.8 183 39.3
Cfa012536 Carpinus fangiana HOM05D003603 ORTHO05D004186 3.2e-17 92.8 60 73.3
ClCG10G001200 Citrullus lanatus HOM05D003603 ORTHO05D004186 5.5e-17 92.0 170 38.2
Gorai.003G186200 Gossypium raimondii HOM05D003080 ORTHO05D003601 7.1e-17 91.7 159 39.6
BcaNung07274 Brassica carinata HOM05D003603 ORTHO05D004186 1.2e-16 90.9 175 39.4
unitig_32.g11622 Utricularia gibba HOM05D003603 ORTHO05D004186 3.5e-16 89.4 171 38.6
HPP92_014701 Vanilla planifolia HOM05D003603 ORTHO05D004186 1.3e-15 87.4 175 35.4
HPP92_005435 Vanilla planifolia HOM05D003603 ORTHO05D004186 1.8e-15 87.0 165 39.4
HPP92_005441 Vanilla planifolia HOM05D003603 ORTHO05D004186 3.9e-15 85.9 165 39.4
ATR0598G345 Amborella trichopoda HOM05D003603 ORTHO05D004186 5.1e-15 85.5 173 32.9
Duzib205G1823 Durio zibethinus HOM05D003603 ORTHO05D004186 5.1e-15 85.5 65 60.0
AT2G35585 Arabidopsis thaliana HOM05D003603 ORTHO05D004186 1.1e-14 84.3 67 64.2
ATR0829G136 Amborella trichopoda HOM05D003603 ORTHO05D004186 1.5e-14 84.0 172 33.1
Os02g0697700 Oryza sativa ssp. japonica HOM05D003603 ORTHO05D004186 7.4e-14 81.6 146 38.4
BcaB07g32857 Brassica carinata HOM05D003603 ORTHO05D004186 4.8e-13 79.0 168 37.5
Peaxi162Scf00045g00444 Petunia axillaris HOM05D003603 ORTHO05D004186 1.1e-12 77.8 160 36.9
Zm00001eb251500 Zea mays HOM05D003603 ORTHO05D004186 1.8e-12 77.0 158 36.1
VMungo1383G2097 Vigna mungo HOM05D003603 ORTHO05D004186 6.9e-12 75.1 57 66.7
THA.LOC104814407 Tarenaya hassleriana HOM05D003603 ORTHO05D004186 1.2e-11 74.3 169 36.1
BcaC02g11674 Brassica carinata HOM05D003603 ORTHO05D004186 3.4e-11 72.8 167 34.7
Lj7C124G0 Lonicera japonica HOM05D003603 ORTHO05D004186 3.4e-11 72.8 69 59.4
BcaC02g11672 Brassica carinata HOM05D003603 ORTHO05D004186 7.6e-11 71.6 167 34.7
CDE03G0025 Ceratophyllum demersum HOM05D003603 ORTHO05D004186 7.6e-11 71.6 151 33.8
SEGI_08166 Sequoiadendron giganteum HOM05D003603 ORTHO05D004186 7.6e-11 71.6 169 31.4
AUR62033208 Chenopodium quinoa HOM05D003603 ORTHO05D004186 1.3e-10 70.9 66 57.6
AUR62044225 Chenopodium quinoa HOM05D003603 ORTHO05D004186 1.3e-10 70.9 66 57.6
MBI13_g04781_MAGBIO Magnolia biondii HOM05D003603 ORTHO05D004186 1.7e-10 70.5 53 60.4
SEGI_33169 Sequoiadendron giganteum HOM05D003603 ORTHO05D004186 1.7e-10 70.5 162 30.9
CDE06G0200 Ceratophyllum demersum HOM05D003603 ORTHO05D004186 1.9e-09 67.0 154 34.4
MBI05_g12773_MAGBIO Magnolia biondii HOM05D003603 ORTHO05D004186 4.6e-08 62.4 42 66.7
C05p31290 Brassica napus HOM05D003603 ORTHO05D004186 2.5e-06 56.6 64 53.1
TAR622G0296 Trochodendron aralioides HOM05D008187 ORTHO05D009830 7.4e-06 55.1 41 51.2


User provided reference genes

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