Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu027877.1 Olea europaea HOM05D000010 ORTHO05D000063 1.2e-252 875.9 432 100.0
Oeu017096.1 Olea europaea HOM05D000010 ORTHO05D000063 5.1e-113 412.1 381 60.6
Dinv08686 Davidia involucrata HOM05D000010 ORTHO05D000063 6.8e-57 225.7 360 39.2
MSTRG.12226 Avicennia marina HOM05D000010 ORTHO05D000063 4.9e-55 219.5 346 43.4
MSTRG.24883 Avicennia marina HOM05D000010 ORTHO05D000063 5.4e-54 216.1 375 39.5
Dinv18787 Davidia involucrata HOM05D000010 ORTHO05D000063 2.0e-53 214.2 386 38.3
Cc08_g17070 Coffea canephora HOM05D000010 ORTHO05D000063 1.5e-51 208.0 318 43.1
SGA_v2.0_scaffold88G27239 Striga asiatica HOM05D000010 ORTHO05D000063 4.1e-46 189.9 360 37.5
Lj2A150T32 Lonicera japonica HOM05D000010 ORTHO05D000063 8.9e-41 172.2 364 35.7
Migut.A01059 Erythranthe guttata HOM05D000010 ORTHO05D000063 2.0e-37 161.0 343 38.5
Manes.01G000155 Manihot esculenta HOM05D000010 ORTHO05D000063 1.9e-35 154.5 342 36.5
Cfa011884 Carpinus fangiana HOM05D000010 ORTHO05D000063 2.8e-34 150.6 410 30.7
Potri.011G149300 Populus trichocarpa HOM05D000010 ORTHO05D000063 4.7e-34 149.8 391 33.0
QL12p003195 Quercus lobata HOM05D000010 ORTHO05D000063 1.1e-33 148.7 370 34.3
MD06G1124800 Malus domestica HOM05D000010 ORTHO05D000063 1.8e-33 147.9 376 33.5
PGR042G1846 Punica granatum HOM05D000010 ORTHO05D000063 3.1e-33 147.1 336 35.1
GSVIVG01019702001 Vitis vinifera HOM05D000010 ORTHO05D000063 5.2e-33 146.4 392 32.1
Sabra16G0305800 Salix brachista HOM05D000010 ORTHO05D000063 6.8e-33 146.0 381 33.1
TAR463G0002 Trochodendron aralioides HOM05D000010 ORTHO05D000063 8.9e-33 145.6 393 33.6
MD00G1096600 Malus domestica HOM05D000010 ORTHO05D000063 1.2e-32 145.2 396 32.3
CiPaw.11G108400 Carya illinoinensis HOM05D000010 ORTHO05D000063 2.0e-32 144.4 388 32.5
Atru.chr9.1829 Acer truncatum HOM05D000010 ORTHO05D000063 2.9e-31 140.6 400 34.0
Prupe.5G135400 Prunus persica HOM05D000010 ORTHO05D000063 4.9e-31 139.8 398 32.2
Ciclev10019282m.g Citrus clementina HOM05D000010 ORTHO05D000063 8.3e-31 139.0 403 32.8
Haze_09219 Corylus avellana HOM05D000010 ORTHO05D000063 3.2e-30 137.1 391 31.2
TWI60G0454 Tripterygium wilfordii HOM05D000010 ORTHO05D000063 7.1e-30 136.0 397 32.5
COL.COLO4_10848 Corchorus olitorius HOM05D000010 ORTHO05D000063 1.2e-29 135.2 229 37.1
Potri.001G452700 Populus trichocarpa HOM05D000010 ORTHO05D000063 2.7e-29 134.0 378 32.3
Thecc.03G215200 Theobroma cacao HOM05D000010 ORTHO05D000063 3.5e-29 133.7 233 39.1
Gohir.D12G243900 Gossypium hirsutum HOM05D000010 ORTHO05D000063 1.9e-27 127.9 243 36.6
Sabra11G0134400 Salix brachista HOM05D000010 ORTHO05D000063 2.5e-27 127.5 399 30.1
Gohir.A12G242900 Gossypium hirsutum HOM05D000010 ORTHO05D000063 4.7e-26 123.2 243 36.6
Gorai.008G261400 Gossypium raimondii HOM05D000010 ORTHO05D000063 6.2e-26 122.9 243 36.2
Duzib084G1031 Durio zibethinus HOM05D000010 ORTHO05D000063 8.1e-26 122.5 242 37.6
Migut.E00715 Erythranthe guttata HOM05D000010 ORTHO05D000063 2.3e-25 120.9 326 34.7
Duzib205G1826 Durio zibethinus HOM05D000010 ORTHO05D000063 3.1e-25 120.6 377 31.6
Eucgr.E01095 Eucalyptus grandis HOM05D000010 ORTHO05D000063 1.5e-24 118.2 321 34.0
TAR374G0753 Trochodendron aralioides HOM05D000010 ORTHO05D000063 2.0e-24 117.9 410 31.2
Duzib068G0323 Durio zibethinus HOM05D000010 ORTHO05D000063 4.4e-24 116.7 243 34.6
TWI81G0302 Tripterygium wilfordii HOM05D000010 ORTHO05D000063 5.8e-24 116.3 237 36.7
CANSAT21G1474 Cannabis sativa HOM05D000010 ORTHO05D000063 1.3e-23 115.2 216 36.6
THA.LOC104809290 Tarenaya hassleriana HOM05D000010 ORTHO05D000063 3.7e-23 113.6 401 29.9
TAR375G0701 Trochodendron aralioides HOM05D000010 ORTHO05D000063 4.9e-23 113.2 363 30.9
Gorai.003G073300 Gossypium raimondii HOM05D000010 ORTHO05D000063 2.4e-22 110.9 206 38.3
Gohir.D03G088500 Gossypium hirsutum HOM05D028865 ORTHO05D025289 4.1e-22 110.2 206 38.3
Carub.0001s3133 Capsella rubella HOM05D000010 ORTHO05D000063 2.1e-21 107.8 385 28.8
Gohir.A02G095000 Gossypium hirsutum HOM05D000010 ORTHO05D000063 2.1e-21 107.8 206 37.4
Aa31LG9G50 Aethionema arabicum HOM05D000010 ORTHO05D000063 3.0e-20 104.0 358 30.7
AT4G35580 Arabidopsis thaliana HOM05D000010 ORTHO05D000063 3.0e-20 104.0 311 31.8
Carub.0007s0473 Capsella rubella HOM05D000010 ORTHO05D000063 1.1e-19 102.1 313 31.6
AL7G15580 Arabidopsis lyrata HOM05D000010 ORTHO05D000063 1.9e-19 101.3 332 30.7
FAN18G0692 Fragaria x ananassa HOM05D000010 ORTHO05D000063 4.3e-19 100.1 348 32.5
FvH4_5g10350 Fragaria vesca HOM05D000010 ORTHO05D000063 2.1e-18 97.8 348 32.2
FAN04G1853 Fragaria x ananassa HOM05D000010 ORTHO05D000063 1.1e-17 95.5 343 30.3
FAN13G1184 Fragaria x ananassa HOM05D000010 ORTHO05D000063 4.0e-17 93.6 346 30.3
FAN08G1204 Fragaria x ananassa HOM05D000010 ORTHO05D000063 8.9e-17 92.4 347 31.1
Cpa.g.sc37.112 Carica papaya HOM05D000010 ORTHO05D000063 2.0e-16 91.3 327 29.1
Lsat_1_v5_gn_6_80780 Lactuca sativa HOM05D000010 ORTHO05D000063 5.8e-16 89.7 196 33.7
ECA240G1477 Erigeron canadensis HOM05D000010 ORTHO05D000063 7.6e-16 89.4 203 35.0
RcHm_v2.0_Chr7g0187871 Rosa chinensis HOM05D000010 ORTHO05D000063 1.7e-15 88.2 372 29.8
AL1G47380 Arabidopsis lyrata HOM05D000010 ORTHO05D000063 4.9e-15 86.7 369 26.0
PSO063G0581 Papaver somniferum HOM05D000010 ORTHO05D000063 1.1e-14 85.5 241 32.8
PSO782G0496 Papaver somniferum HOM05D000010 ORTHO05D000063 1.1e-14 85.5 241 32.8
Aa31LG6G7620 Aethionema arabicum HOM05D000010 ORTHO05D000063 4.2e-14 83.6 350 27.4
TAR629G2610 Trochodendron aralioides HOM05D000010 ORTHO05D000063 9.3e-14 82.4 206 32.5
AT1G33060 Arabidopsis thaliana HOM05D000010 ORTHO05D000063 1.6e-13 81.6 373 24.9
CARHR212470 Cardamine hirsuta HOM05D000010 ORTHO05D000063 2.1e-13 81.3 313 30.0
THA.LOC104806464 Tarenaya hassleriana HOM05D000010 ORTHO05D000063 2.1e-13 81.3 403 26.6
CARHR032390 Cardamine hirsuta HOM05D000010 ORTHO05D000063 2.7e-13 80.9 369 24.1
BcaC05g27810 Brassica carinata HOM05D000010 ORTHO05D000063 7.8e-13 79.3 358 23.7
C05p38120 Brassica napus HOM05D000010 ORTHO05D000063 7.8e-13 79.3 358 23.7
TAR629G0412 Trochodendron aralioides HOM05D000010 ORTHO05D000063 7.8e-13 79.3 200 32.5
THA.LOC104815470 Tarenaya hassleriana HOM05D000010 ORTHO05D000063 1.0e-12 79.0 219 32.0
Thhalv10007021m.g Eutrema salsugineum HOM05D000010 ORTHO05D000063 1.3e-12 78.6 433 24.0
Dinv17289 Davidia involucrata HOM05D000617 ORTHO05D000478 3.0e-12 77.4 368 28.5
BcaB03g13703 Brassica carinata HOM05D000010 ORTHO05D000063 6.6e-12 76.3 380 25.0
A05p24380 Brassica napus HOM05D000010 ORTHO05D000063 1.5e-11 75.1 365 25.8
BraA05t21330Z Brassica rapa HOM05D000010 ORTHO05D000063 1.5e-11 75.1 365 25.8
GSVIVG01038666001 Vitis vinifera HOM05D000010 ORTHO05D000063 1.5e-11 75.1 349 26.1
BolC5t32540H Brassica oleracea HOM05D000010 ORTHO05D000063 1.9e-11 74.7 358 23.5
HanXRQChr03g0083181 Helianthus annuus HOM05D000010 ORTHO05D000063 2.5e-11 74.3 340 29.4
CiPaw.06G039200 Carya illinoinensis HOM05D000010 ORTHO05D000063 3.3e-11 73.9 348 25.9
Dinv29201 Davidia involucrata HOM05D002523 ORTHO05D002951 1.3e-10 72.0 418 25.8
Sp1g28600 Schrenkiella parvula HOM05D000010 ORTHO05D000063 1.3e-10 72.0 194 30.9
Duzib084G1090 Durio zibethinus HOM05D000010 ORTHO05D000063 1.6e-10 71.6 388 24.7
Cpa.g.sc3.170 Carica papaya HOM05D000010 ORTHO05D000063 2.8e-10 70.9 207 30.9
Dinv19741 Davidia involucrata HOM05D000010 ORTHO05D000063 2.8e-10 70.9 422 25.8
Potri.015G004100 Populus trichocarpa HOM05D000010 ORTHO05D000063 6.2e-10 69.7 363 24.5
Hma1.2p1_0415F.1_g148280 Hydrangea macrophylla HOM05D000010 ORTHO05D000063 9.0e-09 65.9 400 24.8
vmacro06457 Vaccinium macrocarpon HOM05D000010 ORTHO05D000063 9.0e-09 65.9 357 24.9
Hma1.2p1_0115F.1_g055590 Hydrangea macrophylla HOM05D000010 ORTHO05D000063 1.5e-08 65.1 249 28.5
MD07G1301800 Malus domestica HOM05D000010 ORTHO05D000063 2.9e-07 60.8 178 32.0
Potri.012G007500 Populus trichocarpa HOM05D000010 ORTHO05D000063 2.9e-07 60.8 373 26.8
arahy.Tifrunner.gnm1.ann1.1UE66A Arachis hypogaea HOM05D000010 ORTHO05D000063 3.8e-07 60.5 339 25.1
TAR629G2990 Trochodendron aralioides HOM05D000010 ORTHO05D000063 3.8e-07 60.5 77 45.5
Aqoxy7G03618 Aquilegia oxysepala HOM05D000010 ORTHO05D000063 4.9e-07 60.1 373 24.7
Gohir.A09G186966 Gossypium hirsutum HOM05D000010 ORTHO05D000063 6.4e-07 59.7 362 25.4
arahy.Tifrunner.gnm1.ann1.V20ZHW Arachis hypogaea HOM05D000010 ORTHO05D000063 1.1e-06 58.9 339 24.2
Ca_19981_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000063 1.1e-06 58.9 363 26.7
Medtr5g069030 Medicago truncatula HOM05D000010 ORTHO05D000063 1.9e-06 58.2 358 26.3
Actinidia34278 Actinidia chinensis HOM05D000617 ORTHO05D000478 4.2e-06 57.0 180 28.3
Phvul.008G189100 Phaseolus vulgaris HOM05D000010 ORTHO05D000063 5.4e-06 56.6 356 24.4
CsaV3_4G008680 Cucumis sativus L. HOM05D000010 ORTHO05D000063 9.3e-06 55.8 328 25.9


User provided reference genes

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